RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 NPHP1O15259 732 aa10.68□□□□□ -0.7
HDGFL3-206ENST00000568294 CCT2P78371 535 aaKnown RBP10.68□□□□□ -0.7
HDGFL3-206ENST00000568294 TTC6Q86TZ1 520 aa10.68□□□□□ -0.7
HDGFL3-206ENST00000568294 TRIM5Q9C035 493 aa10.68□□□□□ -0.7
HDGFL3-206ENST00000568294 ATP6V1DQ9Y5K8 247 aa10.68□□□□□ -0.7
HDGFL3-206ENST00000568294 RICTORQ6R327 1708 aa10.67□□□□□ -0.7
HDGFL3-206ENST00000568294 TTC21AQ8NDW8 1320 aa10.67□□□□□ -0.7
HDGFL3-206ENST00000568294 HSP90AB3PQ58FF7 597 aa10.67□□□□□ -0.7
HDGFL3-206ENST00000568294 SPATA32Q96LK8 384 aa10.67□□□□□ -0.7
HDGFL3-206ENST00000568294 ORAI2Q96SN7 254 aa10.67□□□□□ -0.7
HDGFL3-206ENST00000568294 TNMDQ9H2S6 317 aa10.67□□□□□ -0.7
HDGFL3-206ENST00000568294 STK11IPQ8N1F8 1099 aa10.67□□□□□ -0.7
HDGFL3-206ENST00000568294 TTC14Q96N46 770 aa10.67□□□□□ -0.7
HDGFL3-206ENST00000568294 NUP62CLQ9H1M0 184 aa10.67□□□□□ -0.7
HDGFL3-206ENST00000568294 KRT85P78386 507 aa10.66□□□□□ -0.7
HDGFL3-206ENST00000568294 NRBP1Q9UHY1 535 aa10.66□□□□□ -0.7
HDGFL3-206ENST00000568294 CCDC171Q6TFL3 1326 aa10.66□□□□□ -0.7
HDGFL3-206ENST00000568294 A0A0G2JS52 829 aa10.66□□□□□ -0.7
HDGFL3-206ENST00000568294 ANO6Q4KMQ2 910 aa10.66□□□□□ -0.7
HDGFL3-206ENST00000568294 ADAMTS13Q76LX8 1427 aa10.66□□□□□ -0.7
HDGFL3-206ENST00000568294 FAM184AQ8NB25 1140 aa10.66□□□□□ -0.7
HDGFL3-206ENST00000568294 DBF4Q9UBU7 674 aaPredicted RBP10.66□□□□□ -0.7
HDGFL3-206ENST00000568294 TRHP20396 242 aaPredicted RBP10.66□□□□□ -0.7
HDGFL3-206ENST00000568294 ST3GAL1Q11201 340 aa10.66□□□□□ -0.7
HDGFL3-206ENST00000568294 HSP90AB4PQ58FF6 505 aa10.66□□□□□ -0.7
HDGFL3-206ENST00000568294 UBE3BQ7Z3V4 1068 aa10.66□□□□□ -0.7
HDGFL3-206ENST00000568294 DNAJC25Q9H1X3 360 aa10.66□□□□□ -0.7
HDGFL3-206ENST00000568294 SLC27A2O14975 620 aa10.65□□□□□ -0.7
HDGFL3-206ENST00000568294 CCDC192P0DO97 292 aa10.65□□□□□ -0.7
HDGFL3-206ENST00000568294 POLA2Q14181 598 aa10.65□□□□□ -0.7
HDGFL3-206ENST00000568294 PLEKHO1Q53GL0 409 aaPredicted RBP10.65□□□□□ -0.7
HDGFL3-206ENST00000568294 XAGE3Q8WTP9 111 aa10.65□□□□□ -0.7
HDGFL3-206ENST00000568294 SYTL4Q96C24 671 aaPredicted RBP10.65□□□□□ -0.7
HDGFL3-206ENST00000568294 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.65□□□□□ -0.7
HDGFL3-206ENST00000568294 V9GYY5 206 aaPredicted RBP10.65□□□□□ -0.7
HDGFL3-206ENST00000568294 PEAK1Q9H792 1746 aa10.65□□□□□ -0.7
HDGFL3-206ENST00000568294 SASH1O94885 1247 aa10.65□□□□□ -0.7
HDGFL3-206ENST00000568294 CCDC186Q7Z3E2 898 aa10.65□□□□□ -0.7
HDGFL3-206ENST00000568294 CABLES1Q8TDN4 633 aa10.65□□□□□ -0.7
HDGFL3-206ENST00000568294 FMNL2Q96PY5 1086 aa10.65□□□□□ -0.7
HDGFL3-206ENST00000568294 GRM8O00222 908 aa10.65□□□□□ -0.71
HDGFL3-206ENST00000568294 CHRNA2Q15822 529 aa10.65□□□□□ -0.71
HDGFL3-206ENST00000568294 MAP3K11Q16584 847 aa10.65□□□□□ -0.71
HDGFL3-206ENST00000568294 HS1BP3Q53T59 392 aa10.65□□□□□ -0.71
HDGFL3-206ENST00000568294 EPHA10Q5JZY3 1008 aa10.65□□□□□ -0.71
HDGFL3-206ENST00000568294 COPS6Q7L5N1 327 aa10.65□□□□□ -0.71
HDGFL3-206ENST00000568294 ANKRD24Q8TF21 1146 aa10.65□□□□□ -0.71
HDGFL3-206ENST00000568294 ADCY9O60503 1353 aa10.64□□□□□ -0.71
HDGFL3-206ENST00000568294 CHAF1AQ13111 956 aaPredicted RBP10.64□□□□□ -0.71
HDGFL3-206ENST00000568294 FILIP1Q7Z7B0 1213 aa10.64□□□□□ -0.71
HDGFL3-206ENST00000568294 BRF1Q92994 677 aa10.64□□□□□ -0.71
HDGFL3-206ENST00000568294 NCOA5Q9HCD5 579 aaKnown RBP10.64□□□□□ -0.71
HDGFL3-206ENST00000568294 RIMBP3CA6NJZ7 1639 aa10.64□□□□□ -0.71
HDGFL3-206ENST00000568294 RIMBP3BA6NNM3 1639 aa10.64□□□□□ -0.71
HDGFL3-206ENST00000568294 RIMBP3Q9UFD9 1639 aa10.64□□□□□ -0.71
HDGFL3-206ENST00000568294 TYRO3Q06418 890 aa10.64□□□□□ -0.71
HDGFL3-206ENST00000568294 NEXNQ0ZGT2 675 aa10.64□□□□□ -0.71
HDGFL3-206ENST00000568294 ZBTB9Q96C00 473 aa10.64□□□□□ -0.71
HDGFL3-206ENST00000568294 EVI5LQ96CN4 794 aa10.64□□□□□ -0.71
HDGFL3-206ENST00000568294 ISM2Q6H9L7 571 aa10.63□□□□□ -0.71
HDGFL3-206ENST00000568294 NFATC2IPQ8NCF5 419 aa10.63□□□□□ -0.71
HDGFL3-206ENST00000568294 SNRKQ9NRH2 765 aa10.63□□□□□ -0.71
HDGFL3-206ENST00000568294 USP31Q70CQ4 1352 aa10.63□□□□□ -0.71
HDGFL3-206ENST00000568294 A0A0G2JLW4 131 aa10.63□□□□□ -0.71
HDGFL3-206ENST00000568294 HAND2P61296 217 aa10.63□□□□□ -0.71
HDGFL3-206ENST00000568294 TFCP2Q12800 502 aa10.63□□□□□ -0.71
HDGFL3-206ENST00000568294 NAA30Q147X3 362 aaPredicted RBP10.63□□□□□ -0.71
HDGFL3-206ENST00000568294 PPP4R3BQ5MIZ7 849 aa10.63□□□□□ -0.71
HDGFL3-206ENST00000568294 OTUD7BQ6GQQ9 843 aa10.63□□□□□ -0.71
HDGFL3-206ENST00000568294 KSR2Q6VAB6 950 aa10.63□□□□□ -0.71
HDGFL3-206ENST00000568294 TRMT1Q9NXH9 659 aaKnown RBP10.63□□□□□ -0.71
HDGFL3-206ENST00000568294 RNMTO43148 476 aaKnown RBP10.63□□□□□ -0.71
HDGFL3-206ENST00000568294 NR1I2O75469 434 aa10.63□□□□□ -0.71
HDGFL3-206ENST00000568294 Q6ZUG5 572 aa10.62□□□□□ -0.71
HDGFL3-206ENST00000568294 PIBF1Q8WXW3 757 aa10.62□□□□□ -0.71
HDGFL3-206ENST00000568294 DBNDD2Q9BQY9 259 aa10.62□□□□□ -0.71
HDGFL3-206ENST00000568294 KCNF1Q9H3M0 494 aa10.62□□□□□ -0.71
HDGFL3-206ENST00000568294 PPP6R1Q9UPN7 881 aa10.62□□□□□ -0.71
HDGFL3-206ENST00000568294 GOLIM4O00461 696 aa10.62□□□□□ -0.71
HDGFL3-206ENST00000568294 GIGYF1O75420 1035 aaPredicted RBP10.62□□□□□ -0.71
HDGFL3-206ENST00000568294 ARID5BQ14865 1188 aa10.62□□□□□ -0.71
HDGFL3-206ENST00000568294 VPS53Q5VIR6 699 aa10.62□□□□□ -0.71
HDGFL3-206ENST00000568294 RNF20Q5VTR2 975 aa10.62□□□□□ -0.71
HDGFL3-206ENST00000568294 AXIN2Q9Y2T1 843 aa10.62□□□□□ -0.71
HDGFL3-206ENST00000568294 KDRP35968 1356 aa10.62□□□□□ -0.71
HDGFL3-206ENST00000568294 RIOK3O14730 519 aaKnown RBP10.62□□□□□ -0.71
HDGFL3-206ENST00000568294 DDX58O95786 925 aaKnown RBP10.62□□□□□ -0.71
HDGFL3-206ENST00000568294 THEMISQ8N1K5 641 aaPredicted RBP10.62□□□□□ -0.71
HDGFL3-206ENST00000568294 IP6K1Q92551 441 aa10.62□□□□□ -0.71
HDGFL3-206ENST00000568294 KIF3AQ9Y496 699 aa10.62□□□□□ -0.71
HDGFL3-206ENST00000568294 BIN1O00499 593 aa10.61□□□□□ -0.71
HDGFL3-206ENST00000568294 DYNC1I1O14576 645 aa10.61□□□□□ -0.71
HDGFL3-206ENST00000568294 HTATSF1O43719 755 aaKnown RBP10.61□□□□□ -0.71
HDGFL3-206ENST00000568294 PSMA5P28066 241 aa10.61□□□□□ -0.71
HDGFL3-206ENST00000568294 TCHHQ07283 1943 aa10.61□□□□□ -0.71
HDGFL3-206ENST00000568294 GCP02774 474 aa10.61□□□□□ -0.71
HDGFL3-206ENST00000568294 APOBRQ0VD83 1088 aa10.61□□□□□ -0.71
HDGFL3-206ENST00000568294 PTPN21Q16825 1174 aa10.61□□□□□ -0.71
HDGFL3-206ENST00000568294 RAPGEF4Q8WZA2 1011 aa10.61□□□□□ -0.71
HDGFL3-206ENST00000568294 CBX8Q9HC52 389 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms