RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 DKK1O94907 266 aa7.29□□□□□ -1.24
CDH1-211ENST00000567320 C8orf86Q6ZUL3 223 aa7.29□□□□□ -1.24
CDH1-211ENST00000567320 TNFRSF25Q93038 417 aa7.29□□□□□ -1.24
CDH1-211ENST00000567320 USP17L15C9J2P7 530 aa7.28□□□□□ -1.24
CDH1-211ENST00000567320 USP17L10C9JJH3 530 aa7.28□□□□□ -1.24
CDH1-211ENST00000567320 USP17L13C9JLJ4 530 aa7.28□□□□□ -1.24
CDH1-211ENST00000567320 USP17L12C9JPN9 530 aa7.28□□□□□ -1.24
CDH1-211ENST00000567320 USP17L11C9JVI0 530 aa7.28□□□□□ -1.24
CDH1-211ENST00000567320 USP17L21D6R901 530 aa7.28□□□□□ -1.24
CDH1-211ENST00000567320 USP17L18D6R9N7 530 aa7.28□□□□□ -1.24
CDH1-211ENST00000567320 USP17L22D6RA61 530 aa7.28□□□□□ -1.24
CDH1-211ENST00000567320 USP17L17D6RBQ6 530 aa7.28□□□□□ -1.24
CDH1-211ENST00000567320 USP17L19D6RCP7 530 aa7.28□□□□□ -1.24
CDH1-211ENST00000567320 USP17L20D6RJB6 530 aa7.28□□□□□ -1.24
CDH1-211ENST00000567320 ALBP02768 609 aa7.28□□□□□ -1.24
CDH1-211ENST00000567320 GATA4P43694 442 aa7.28□□□□□ -1.24
CDH1-211ENST00000567320 KCNQ4P56696 695 aa7.28□□□□□ -1.24
CDH1-211ENST00000567320 USP17L24Q0WX57 530 aa7.28□□□□□ -1.24
CDH1-211ENST00000567320 TRIM28Q13263 835 aaKnown RBP7.28□□□□□ -1.24
CDH1-211ENST00000567320 PTK7Q13308 1070 aa7.28□□□□□ -1.24
CDH1-211ENST00000567320 DOC2BQ14184 412 aa7.28□□□□□ -1.24
CDH1-211ENST00000567320 MICALL1Q8N3F8 863 aa7.28□□□□□ -1.24
CDH1-211ENST00000567320 STAG2Q8N3U4 1231 aa7.28□□□□□ -1.24
CDH1-211ENST00000567320 VTI1AQ96AJ9 217 aa7.28□□□□□ -1.24
CDH1-211ENST00000567320 RTN1Q16799 776 aa7.27□□□□□ -1.25
CDH1-211ENST00000567320 TRAPPC3LQ5T215 181 aa7.27□□□□□ -1.25
CDH1-211ENST00000567320 POTEAQ6S8J7 498 aa7.27□□□□□ -1.25
CDH1-211ENST00000567320 ANKMY2Q8IV38 441 aa7.27□□□□□ -1.25
CDH1-211ENST00000567320 STARD13Q9Y3M8 1113 aa7.27□□□□□ -1.25
CDH1-211ENST00000567320 A6NJR5 290 aa7.26□□□□□ -1.25
CDH1-211ENST00000567320 LILRB5O75023 590 aa7.26□□□□□ -1.25
CDH1-211ENST00000567320 RFX1P22670 979 aa7.26□□□□□ -1.25
CDH1-211ENST00000567320 KANK4Q5T7N3 995 aaPredicted RBP7.26□□□□□ -1.25
CDH1-211ENST00000567320 ZNF777Q9ULD5 760 aaPredicted RBP7.26□□□□□ -1.25
CDH1-211ENST00000567320 FAM196BA6NMK8 535 aa7.25□□□□□ -1.25
CDH1-211ENST00000567320 EPB42P16452 691 aa7.25□□□□□ -1.25
CDH1-211ENST00000567320 IGFBP4P22692 258 aa7.25□□□□□ -1.25
CDH1-211ENST00000567320 CDCA8Q53HL2 280 aa7.25□□□□□ -1.25
CDH1-211ENST00000567320 NUDT8Q8WV74 236 aa7.25□□□□□ -1.25
CDH1-211ENST00000567320 MDFIQ99750 246 aa7.25□□□□□ -1.25
CDH1-211ENST00000567320 SEMA6BQ9H3T3 888 aa7.25□□□□□ -1.25
CDH1-211ENST00000567320 JPH1Q9HDC5 661 aaPredicted RBP7.25□□□□□ -1.25
CDH1-211ENST00000567320 TGFBR3LH3BV60 316 aa7.24□□□□□ -1.25
CDH1-211ENST00000567320 NFKB1P19838 968 aa7.24□□□□□ -1.25
CDH1-211ENST00000567320 CCINQ13939 588 aa7.24□□□□□ -1.25
CDH1-211ENST00000567320 FAM200AQ8TCP9 573 aa7.24□□□□□ -1.25
CDH1-211ENST00000567320 KLK14Q9P0G3 267 aa7.24□□□□□ -1.25
CDH1-211ENST00000567320 SLC6A14Q9UN76 642 aa7.24□□□□□ -1.25
CDH1-211ENST00000567320 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.24□□□□□ -1.25
CDH1-211ENST00000567320 DGKZQ13574 1117 aa7.23□□□□□ -1.25
CDH1-211ENST00000567320 GRIK4Q16099 956 aa7.23□□□□□ -1.25
CDH1-211ENST00000567320 KRT25Q7Z3Z0 450 aa7.23□□□□□ -1.25
CDH1-211ENST00000567320 NACC1Q96RE7 527 aa7.23□□□□□ -1.25
CDH1-211ENST00000567320 GSX2Q9BZM3 304 aa7.23□□□□□ -1.25
CDH1-211ENST00000567320 PRDM6Q9NQX0 595 aa7.23□□□□□ -1.25
CDH1-211ENST00000567320 DNAJB12Q9NXW2 375 aaKnown RBP7.23□□□□□ -1.25
CDH1-211ENST00000567320 IER5Q5VY09 327 aa7.22□□□□□ -1.25
CDH1-211ENST00000567320 NID1P14543 1247 aa7.21□□□□□ -1.26
CDH1-211ENST00000567320 IDH3AP50213 366 aa7.21□□□□□ -1.26
CDH1-211ENST00000567320 RAC1P63000 192 aa7.21□□□□□ -1.26
CDH1-211ENST00000567320 PSAPL1Q6NUJ1 521 aa7.21□□□□□ -1.26
CDH1-211ENST00000567320 C20orf204Q6ZNR8 217 aa7.21□□□□□ -1.26
CDH1-211ENST00000567320 EFCC1Q9HA90 598 aa7.21□□□□□ -1.26
CDH1-211ENST00000567320 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.21□□□□□ -1.26
CDH1-211ENST00000567320 BCS1LQ9Y276 419 aa7.21□□□□□ -1.26
CDH1-211ENST00000567320 RGS9O75916 674 aaPredicted RBP7.2□□□□□ -1.26
CDH1-211ENST00000567320 COL9A3Q14050 684 aaPredicted RBP7.2□□□□□ -1.26
CDH1-211ENST00000567320 FAM35AQ86V20 835 aa7.2□□□□□ -1.26
CDH1-211ENST00000567320 FOXO3O43524 673 aa7.19□□□□□ -1.26
CDH1-211ENST00000567320 CPB1P15086 417 aa7.19□□□□□ -1.26
CDH1-211ENST00000567320 ARSDP51689 593 aa7.19□□□□□ -1.26
CDH1-211ENST00000567320 PCSK7Q16549 785 aa7.19□□□□□ -1.26
CDH1-211ENST00000567320 ARXQ96QS3 562 aa7.19□□□□□ -1.26
CDH1-211ENST00000567320 MICAL2O94851 1124 aa7.18□□□□□ -1.26
CDH1-211ENST00000567320 WEE1P30291 646 aa7.18□□□□□ -1.26
CDH1-211ENST00000567320 INPP5BP32019 993 aa7.18□□□□□ -1.26
CDH1-211ENST00000567320 MLLT1Q03111 559 aaPredicted RBP7.18□□□□□ -1.26
CDH1-211ENST00000567320 C11orf91Q3C1V1 193 aa7.18□□□□□ -1.26
CDH1-211ENST00000567320 CFAP70Q5T0N1 1121 aa7.18□□□□□ -1.26
CDH1-211ENST00000567320 XP32Q5T750 250 aa7.18□□□□□ -1.26
CDH1-211ENST00000567320 DMRTC2Q8IXT2 367 aaPredicted RBP7.18□□□□□ -1.26
CDH1-211ENST00000567320 QTRT2Q9H974 415 aaKnown RBP7.18□□□□□ -1.26
CDH1-211ENST00000567320 DMGDHQ9UI17 866 aaKnown RBP7.18□□□□□ -1.26
CDH1-211ENST00000567320 USP21Q9UK80 565 aa7.18□□□□□ -1.26
CDH1-211ENST00000567320 NOVA2Q9UNW9 492 aaKnown RBP7.18□□□□□ -1.26
CDH1-211ENST00000567320 A0A0A0MRY4 1105 aa7.17□□□□□ -1.26
CDH1-211ENST00000567320 C9orf172C9J069 976 aa7.17□□□□□ -1.26
CDH1-211ENST00000567320 SASH3O75995 380 aa7.17□□□□□ -1.26
CDH1-211ENST00000567320 RARAP10276 462 aa7.17□□□□□ -1.26
CDH1-211ENST00000567320 TARSP26639 723 aaKnown RBP7.17□□□□□ -1.26
CDH1-211ENST00000567320 IFT43Q96FT9 208 aa7.17□□□□□ -1.26
CDH1-211ENST00000567320 PRIMPOLQ96LW4 560 aa7.17□□□□□ -1.26
CDH1-211ENST00000567320 TPSG1Q9NRR2 321 aa7.17□□□□□ -1.26
CDH1-211ENST00000567320 NAGPAQ9UK23 515 aa7.17□□□□□ -1.26
CDH1-211ENST00000567320 ELNP15502 786 aa7.16□□□□□ -1.26
CDH1-211ENST00000567320 ARID4AP29374 1257 aaPredicted RBP7.16□□□□□ -1.26
CDH1-211ENST00000567320 AFF1P51825 1210 aaKnown RBP7.16□□□□□ -1.26
CDH1-211ENST00000567320 ELMSAN1Q6PJG2 1045 aa7.16□□□□□ -1.26
CDH1-211ENST00000567320 DHX32Q7L7V1 743 aaKnown RBP7.16□□□□□ -1.26
CDH1-211ENST00000567320 RGL4Q8IZJ4 473 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms