RNA–Protein interactions for RNA: ENST00000567289.5

SIN3A-208, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2 BASIC

Gene SIN3A, Length 4,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-208ENST00000567289 NMIQ13287 307 aaPredicted RBP13.64□□□□□ -0.23
SIN3A-208ENST00000567289 TTC39AQ5SRH9 613 aa13.64□□□□□ -0.23
SIN3A-208ENST00000567289 Q6ZUG5 572 aa13.64□□□□□ -0.23
SIN3A-208ENST00000567289 NPHP3Q7Z494 1330 aa13.63□□□□□ -0.23
SIN3A-208ENST00000567289 A0A1B0GVL5 298 aa13.63□□□□□ -0.23
SIN3A-208ENST00000567289 MTHFSDQ2M296 383 aaKnown RBP13.63□□□□□ -0.23
SIN3A-208ENST00000567289 UBASH3AP57075 661 aa13.63□□□□□ -0.23
SIN3A-208ENST00000567289 CDC37L1Q7L3B6 337 aa13.63□□□□□ -0.23
SIN3A-208ENST00000567289 UNC5CLQ8IV45 518 aa13.63□□□□□ -0.23
SIN3A-208ENST00000567289 ZNF397Q8NF99 534 aaPredicted RBP13.63□□□□□ -0.23
SIN3A-208ENST00000567289 SMARCE1Q969G3 411 aa13.63□□□□□ -0.23
SIN3A-208ENST00000567289 TRHP20396 242 aaPredicted RBP13.63□□□□□ -0.23
SIN3A-208ENST00000567289 NAA30Q147X3 362 aaPredicted RBP13.63□□□□□ -0.23
SIN3A-208ENST00000567289 CWF19L2Q2TBE0 894 aaKnown RBP13.63□□□□□ -0.23
SIN3A-208ENST00000567289 KIF20AO95235 890 aa13.62□□□□□ -0.23
SIN3A-208ENST00000567289 GSDMDP57764 484 aa13.62□□□□□ -0.23
SIN3A-208ENST00000567289 KARSQ15046 597 aaKnown RBP13.62□□□□□ -0.23
SIN3A-208ENST00000567289 ORC3Q9UBD5 711 aaPredicted RBP13.62□□□□□ -0.23
SIN3A-208ENST00000567289 GOLGA8BA8MQT2 603 aa13.62□□□□□ -0.23
SIN3A-208ENST00000567289 ZSCAN12O43309 604 aa13.62□□□□□ -0.23
SIN3A-208ENST00000567289 CREB3L3Q68CJ9 461 aa13.62□□□□□ -0.23
SIN3A-208ENST00000567289 CNNM3Q8NE01 707 aa13.62□□□□□ -0.23
SIN3A-208ENST00000567289 KLHDC4Q8TBB5 520 aa13.62□□□□□ -0.23
SIN3A-208ENST00000567289 ZNF215Q9UL58 517 aaPredicted RBP13.62□□□□□ -0.23
SIN3A-208ENST00000567289 PPIP5K1Q6PFW1 1433 aa13.62□□□□□ -0.23
SIN3A-208ENST00000567289 NEMFO60524 1076 aa13.62□□□□□ -0.23
SIN3A-208ENST00000567289 CCDC158Q5M9N0 1113 aa13.62□□□□□ -0.23
SIN3A-208ENST00000567289 FAM227BQ96M60 508 aa13.62□□□□□ -0.23
SIN3A-208ENST00000567289 FEZ1Q99689 392 aa13.62□□□□□ -0.23
SIN3A-208ENST00000567289 CCDC171Q6TFL3 1326 aa13.61□□□□□ -0.23
SIN3A-208ENST00000567289 ZC3H6P61129 1189 aaKnown RBP13.61□□□□□ -0.23
SIN3A-208ENST00000567289 OTUD7BQ6GQQ9 843 aa13.61□□□□□ -0.23
SIN3A-208ENST00000567289 DEF6Q9H4E7 631 aa13.61□□□□□ -0.23
SIN3A-208ENST00000567289 CTAGE5O15320 804 aa13.61□□□□□ -0.23
SIN3A-208ENST00000567289 UTP14AQ9BVJ6 771 aaKnown RBP13.61□□□□□ -0.23
SIN3A-208ENST00000567289 EIF4G3O43432 1585 aaKnown RBP13.61□□□□□ -0.23
SIN3A-208ENST00000567289 NUP160Q12769 1436 aa13.61□□□□□ -0.23
SIN3A-208ENST00000567289 RSPH14Q9UHP6 348 aa13.61□□□□□ -0.23
SIN3A-208ENST00000567289 NSD2O96028 1365 aa13.61□□□□□ -0.23
SIN3A-208ENST00000567289 JAK2O60674 1132 aa13.6□□□□□ -0.23
SIN3A-208ENST00000567289 UBE3BQ7Z3V4 1068 aa13.6□□□□□ -0.23
SIN3A-208ENST00000567289 MICU3Q86XE3 530 aa13.6□□□□□ -0.23
SIN3A-208ENST00000567289 PUF60Q9UHX1 559 aaKnown RBP13.6□□□□□ -0.23
SIN3A-208ENST00000567289 U3KPZ7 1027 aaPredicted RBP13.6□□□□□ -0.23
SIN3A-208ENST00000567289 TRPM1Q7Z4N2 1603 aa13.6□□□□□ -0.23
SIN3A-208ENST00000567289 TRAPPC8Q9Y2L5 1435 aa13.6□□□□□ -0.23
SIN3A-208ENST00000567289 WDR7Q9Y4E6 1490 aa13.6□□□□□ -0.23
SIN3A-208ENST00000567289 APOBRQ0VD83 1088 aa13.6□□□□□ -0.23
SIN3A-208ENST00000567289 VPS37DQ86XT2 251 aa13.6□□□□□ -0.23
SIN3A-208ENST00000567289 ARFGAP3Q9NP61 516 aa13.6□□□□□ -0.23
SIN3A-208ENST00000567289 CEP126Q9P2H0 1117 aa13.6□□□□□ -0.23
SIN3A-208ENST00000567289 ERCC6LQ2NKX8 1250 aa13.6□□□□□ -0.23
SIN3A-208ENST00000567289 NCOA5Q9HCD5 579 aaKnown RBP13.6□□□□□ -0.23
SIN3A-208ENST00000567289 CDC42BPAQ5VT25 1732 aa13.6□□□□□ -0.23
SIN3A-208ENST00000567289 KIF5CO60282 957 aa13.59□□□□□ -0.23
SIN3A-208ENST00000567289 IFIT1P09914 478 aaKnown RBP13.59□□□□□ -0.23
SIN3A-208ENST00000567289 DHX8Q14562 1220 aaKnown RBP13.59□□□□□ -0.23
SIN3A-208ENST00000567289 CCDC129Q6ZRS4 1044 aa13.59□□□□□ -0.23
SIN3A-208ENST00000567289 RASEFQ8IZ41 740 aa13.59□□□□□ -0.23
SIN3A-208ENST00000567289 CRACR2AQ9BSW2 395 aa13.59□□□□□ -0.23
SIN3A-208ENST00000567289 LZTFL1Q9NQ48 299 aa13.59□□□□□ -0.23
SIN3A-208ENST00000567289 CROCC2H7BZ55 1655 aa13.59□□□□□ -0.23
SIN3A-208ENST00000567289 RDXP35241 583 aaKnown RBP13.59□□□□□ -0.23
SIN3A-208ENST00000567289 ZNF75DP51815 510 aa13.59□□□□□ -0.23
SIN3A-208ENST00000567289 CCDC191Q8NCU4 936 aa13.59□□□□□ -0.23
SIN3A-208ENST00000567289 EDC3Q96F86 508 aaKnown RBP13.59□□□□□ -0.23
SIN3A-208ENST00000567289 CNNM1Q9NRU3 951 aa13.59□□□□□ -0.23
SIN3A-208ENST00000567289 PPARDQ03181 441 aa13.59□□□□□ -0.23
SIN3A-208ENST00000567289 NPC1L1Q9UHC9 1359 aa13.58□□□□□ -0.23
SIN3A-208ENST00000567289 NBPF7P0C2Y1 421 aaPredicted RBP13.58□□□□□ -0.24
SIN3A-208ENST00000567289 RXRAP19793 462 aa13.58□□□□□ -0.24
SIN3A-208ENST00000567289 MATR3P43243 847 aaKnown RBP eCLIP13.58□□□□□ -0.24
SIN3A-208ENST00000567289 ATP2B3Q16720 1220 aa13.58□□□□□ -0.24
SIN3A-208ENST00000567289 IMMTQ16891 758 aaKnown RBP13.58□□□□□ -0.24
SIN3A-208ENST00000567289 RUFY3Q7L099 469 aa13.58□□□□□ -0.24
SIN3A-208ENST00000567289 TRIM22Q8IYM9 498 aa13.58□□□□□ -0.24
SIN3A-208ENST00000567289 SGSM2O43147 1006 aa13.58□□□□□ -0.24
SIN3A-208ENST00000567289 PTPN21Q16825 1174 aa13.58□□□□□ -0.24
SIN3A-208ENST00000567289 RABEP2Q9H5N1 569 aa13.58□□□□□ -0.24
SIN3A-208ENST00000567289 A0A087WZG4 1122 aa13.58□□□□□ -0.24
SIN3A-208ENST00000567289 CAPN2P17655 700 aa13.58□□□□□ -0.24
SIN3A-208ENST00000567289 TTC6Q86TZ1 520 aa13.58□□□□□ -0.24
SIN3A-208ENST00000567289 TBC1D2BQ9UPU7 963 aa13.58□□□□□ -0.24
SIN3A-208ENST00000567289 ACEP12821 1306 aa13.58□□□□□ -0.24
SIN3A-208ENST00000567289 SOS1Q07889 1333 aaPredicted RBP13.58□□□□□ -0.24
SIN3A-208ENST00000567289 NR1I2O75469 434 aa13.57□□□□□ -0.24
SIN3A-208ENST00000567289 SART3Q15020 963 aaKnown RBP13.57□□□□□ -0.24
SIN3A-208ENST00000567289 ENOX2Q16206 610 aaKnown RBP13.57□□□□□ -0.24
SIN3A-208ENST00000567289 ZSCAN25Q6NSZ9 544 aa13.57□□□□□ -0.24
SIN3A-208ENST00000567289 MRPS27Q92552 414 aaKnown RBP13.57□□□□□ -0.24
SIN3A-208ENST00000567289 CARD6Q9BX69 1037 aa13.57□□□□□ -0.24
SIN3A-208ENST00000567289 FAM107BQ9H098 131 aa13.57□□□□□ -0.24
SIN3A-208ENST00000567289 PRDM15P57071 1507 aaPredicted RBP13.57□□□□□ -0.24
SIN3A-208ENST00000567289 RHOXF2BP0C7M4 288 aa13.57□□□□□ -0.24
SIN3A-208ENST00000567289 ME3Q16798 604 aa13.57□□□□□ -0.24
SIN3A-208ENST00000567289 CCDC57Q2TAC2 916 aa13.57□□□□□ -0.24
SIN3A-208ENST00000567289 KIF2CQ99661 725 aa13.57□□□□□ -0.24
SIN3A-208ENST00000567289 RHOXF2Q9BQY4 288 aa13.57□□□□□ -0.24
SIN3A-208ENST00000567289 DBF4Q9UBU7 674 aaPredicted RBP13.57□□□□□ -0.24
SIN3A-208ENST00000567289 PTPRTO14522 1441 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms