RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 UBN2Q6ZU65 1347 aa20.58■□□□□ 0.89
PALB2-205ENST00000567003 TCERG1O14776 1098 aaKnown RBP20.58■□□□□ 0.89
PALB2-205ENST00000567003 MYL6BP14649 208 aa20.58■□□□□ 0.89
PALB2-205ENST00000567003 CTCFP49711 727 aaPredicted RBP20.58■□□□□ 0.89
PALB2-205ENST00000567003 FMR1Q06787 632 aaKnown RBP eCLIP20.58■□□□□ 0.89
PALB2-205ENST00000567003 GPC2Q8N158 579 aa20.58■□□□□ 0.89
PALB2-205ENST00000567003 PSMD1Q99460 953 aa20.58■□□□□ 0.89
PALB2-205ENST00000567003 ZBTB3Q9H5J0 574 aa20.58■□□□□ 0.89
PALB2-205ENST00000567003 C3orf67Q6ZVT6 689 aa20.57■□□□□ 0.88
PALB2-205ENST00000567003 PNMA8AQ86V59 439 aaPredicted RBP20.57■□□□□ 0.88
PALB2-205ENST00000567003 NYXQ9GZU5 481 aa20.57■□□□□ 0.88
PALB2-205ENST00000567003 PRDM10Q9NQV6 1147 aa20.57■□□□□ 0.88
PALB2-205ENST00000567003 WBP1LQ9NX94 342 aa20.57■□□□□ 0.88
PALB2-205ENST00000567003 LBX1P52954 281 aa20.56■□□□□ 0.88
PALB2-205ENST00000567003 KIF6Q6ZMV9 814 aa20.56■□□□□ 0.88
PALB2-205ENST00000567003 JDP2Q8WYK2 163 aa20.56■□□□□ 0.88
PALB2-205ENST00000567003 RPGRQ92834 1020 aaKnown RBP20.56■□□□□ 0.88
PALB2-205ENST00000567003 RASSF10A6NK89 507 aa20.55■□□□□ 0.88
PALB2-205ENST00000567003 ERVV-1B6SEH8 477 aa20.55■□□□□ 0.88
PALB2-205ENST00000567003 EIF6P56537 245 aaKnown RBP20.55■□□□□ 0.88
PALB2-205ENST00000567003 EIF4A1P60842 406 aaKnown RBP20.55■□□□□ 0.88
PALB2-205ENST00000567003 DEFB115Q30KQ5 88 aa20.55■□□□□ 0.88
PALB2-205ENST00000567003 SUSD4Q5VX71 490 aa20.55■□□□□ 0.88
PALB2-205ENST00000567003 ABT1Q9ULW3 272 aaKnown RBP20.55■□□□□ 0.88
PALB2-205ENST00000567003 RIC1Q4ADV7 1423 aa20.54■□□□□ 0.88
PALB2-205ENST00000567003 EPS15P42566 896 aa20.54■□□□□ 0.88
PALB2-205ENST00000567003 WDR33Q9C0J8 1336 aaKnown RBP20.53■□□□□ 0.88
PALB2-205ENST00000567003 PPEF1O14829 653 aaPredicted RBP20.53■□□□□ 0.88
PALB2-205ENST00000567003 HSPA8P11142 646 aaKnown RBP20.53■□□□□ 0.88
PALB2-205ENST00000567003 HOXA10P31260 410 aaPredicted RBP20.53■□□□□ 0.88
PALB2-205ENST00000567003 SCNN1DP51172 638 aa20.53■□□□□ 0.88
PALB2-205ENST00000567003 NCBP3Q53F19 620 aaKnown RBP20.53■□□□□ 0.88
PALB2-205ENST00000567003 LARGE2Q8N3Y3 721 aa20.53■□□□□ 0.88
PALB2-205ENST00000567003 DDX21Q9NR30 783 aaKnown RBP eCLIP20.53■□□□□ 0.88
PALB2-205ENST00000567003 IBTKQ9P2D0 1353 aaPredicted RBP20.52■□□□□ 0.88
PALB2-205ENST00000567003 NTSR2O95665 410 aa20.52■□□□□ 0.88
PALB2-205ENST00000567003 LMOD1P29536 600 aaPredicted RBP20.52■□□□□ 0.88
PALB2-205ENST00000567003 CC2D2BQ6DHV5 1058 aa20.51■□□□□ 0.87
PALB2-205ENST00000567003 ZNF34Q8IZ26 560 aa20.51■□□□□ 0.87
PALB2-205ENST00000567003 PNISRQ8TF01 805 aaKnown RBP20.51■□□□□ 0.87
PALB2-205ENST00000567003 RBM17Q96I25 401 aaKnown RBP20.51■□□□□ 0.87
PALB2-205ENST00000567003 TRAF5O00463 557 aa20.5■□□□□ 0.87
PALB2-205ENST00000567003 GRM1Q13255 1194 aa20.5■□□□□ 0.87
PALB2-205ENST00000567003 NFE2L2Q16236 605 aa20.5■□□□□ 0.87
PALB2-205ENST00000567003 PAXIP1Q6ZW49 1069 aaPredicted RBP20.5■□□□□ 0.87
PALB2-205ENST00000567003 PLEKHF1Q96S99 279 aa20.5■□□□□ 0.87
PALB2-205ENST00000567003 AOC3Q16853 763 aa20.49■□□□□ 0.87
PALB2-205ENST00000567003 CRAMP1Q96RY5 1269 aa20.49■□□□□ 0.87
PALB2-205ENST00000567003 TRPM7Q96QT4 1865 aa20.49■□□□□ 0.87
PALB2-205ENST00000567003 THSD7BQ9C0I4 1608 aa20.49■□□□□ 0.87
PALB2-205ENST00000567003 PPIP5K2O43314 1243 aa20.48■□□□□ 0.87
PALB2-205ENST00000567003 ANXA1P04083 346 aa20.48■□□□□ 0.87
PALB2-205ENST00000567003 NEFMP07197 916 aa20.48■□□□□ 0.87
PALB2-205ENST00000567003 CYP4F22Q6NT55 531 aa20.48■□□□□ 0.87
PALB2-205ENST00000567003 NIM1KQ8IY84 436 aa20.48■□□□□ 0.87
PALB2-205ENST00000567003 LAMB2P55268 1798 aa20.47■□□□□ 0.87
PALB2-205ENST00000567003 PROSER3Q2NL68 480 aa20.47■□□□□ 0.87
PALB2-205ENST00000567003 GIGYF2Q6Y7W6 1299 aaKnown RBP20.47■□□□□ 0.87
PALB2-205ENST00000567003 CAPNS2Q96L46 248 aa20.47■□□□□ 0.87
PALB2-205ENST00000567003 CST9Q5W186 159 aa20.46■□□□□ 0.87
PALB2-205ENST00000567003 LRP10Q7Z4F1 713 aa20.46■□□□□ 0.87
PALB2-205ENST00000567003 ABCC4O15439 1325 aa20.46■□□□□ 0.87
PALB2-205ENST00000567003 EIF2S2P20042 333 aaKnown RBP20.45■□□□□ 0.86
PALB2-205ENST00000567003 MAP2K1Q02750 393 aaPredicted RBP20.45■□□□□ 0.86
PALB2-205ENST00000567003 ABHD8Q96I13 439 aa20.45■□□□□ 0.86
PALB2-205ENST00000567003 TSPYL4Q9UJ04 414 aa20.45■□□□□ 0.86
PALB2-205ENST00000567003 PDIA6Q15084 440 aa20.44■□□□□ 0.86
PALB2-205ENST00000567003 USP50Q70EL3 339 aaPredicted RBP20.44■□□□□ 0.86
PALB2-205ENST00000567003 PPP1R42Q7Z4L9 355 aa20.44■□□□□ 0.86
PALB2-205ENST00000567003 ZNF428Q96B54 188 aa20.44■□□□□ 0.86
PALB2-205ENST00000567003 ANKRD36CQ5JPF3 1778 aa20.44■□□□□ 0.86
PALB2-205ENST00000567003 AOC2O75106 756 aa20.43■□□□□ 0.86
PALB2-205ENST00000567003 CXCL9Q07325 125 aa20.43■□□□□ 0.86
PALB2-205ENST00000567003 GRIPAP1Q4V328 841 aa20.43■□□□□ 0.86
PALB2-205ENST00000567003 NECTIN2Q92692 538 aa20.43■□□□□ 0.86
PALB2-205ENST00000567003 NLRP3Q96P20 1036 aa20.43■□□□□ 0.86
PALB2-205ENST00000567003 UTP14AQ9BVJ6 771 aaKnown RBP20.43■□□□□ 0.86
PALB2-205ENST00000567003 GPRC5DQ9NZD1 345 aa20.43■□□□□ 0.86
PALB2-205ENST00000567003 TSKSQ9UJT2 592 aa20.43■□□□□ 0.86
PALB2-205ENST00000567003 ATP6V0A2Q9Y487 856 aa20.43■□□□□ 0.86
PALB2-205ENST00000567003 ERBB4Q15303 1308 aa20.43■□□□□ 0.86
PALB2-205ENST00000567003 MAPK8IP3Q9UPT6 1336 aa20.43■□□□□ 0.86
PALB2-205ENST00000567003 TAF1P21675 1872 aa20.43■□□□□ 0.86
PALB2-205ENST00000567003 GMPSP49915 693 aaPredicted RBP20.42■□□□□ 0.86
PALB2-205ENST00000567003 PARP10Q53GL7 1025 aa20.42■□□□□ 0.86
PALB2-205ENST00000567003 GPR101Q96P66 508 aaPredicted RBP20.42■□□□□ 0.86
PALB2-205ENST00000567003 HCLS1P14317 486 aaPredicted RBP20.41■□□□□ 0.86
PALB2-205ENST00000567003 ADARB2Q9NS39 739 aaKnown RBP20.41■□□□□ 0.86
PALB2-205ENST00000567003 TLL2Q9Y6L7 1015 aa20.41■□□□□ 0.86
PALB2-205ENST00000567003 SLC10A5Q5PT55 438 aa20.4■□□□□ 0.86
PALB2-205ENST00000567003 GLIS2Q9BZE0 524 aaPredicted RBP20.4■□□□□ 0.86
PALB2-205ENST00000567003 ZNRF3Q9ULT6 936 aa20.4■□□□□ 0.86
PALB2-205ENST00000567003 SHTN1A0MZ66 631 aa20.39■□□□□ 0.85
PALB2-205ENST00000567003 ECE1P42892 770 aa20.39■□□□□ 0.85
PALB2-205ENST00000567003 AIMP1Q12904 312 aaKnown RBP20.39■□□□□ 0.85
PALB2-205ENST00000567003 DPP8Q6V1X1 898 aaPredicted RBP20.39■□□□□ 0.85
PALB2-205ENST00000567003 TMX4Q9H1E5 349 aaPredicted RBP20.39■□□□□ 0.85
PALB2-205ENST00000567003 RAD17O75943 681 aa20.38■□□□□ 0.85
PALB2-205ENST00000567003 CELF2O95319 508 aaKnown RBP20.38■□□□□ 0.85
PALB2-205ENST00000567003 TRPM4Q8TD43 1214 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms