RNA–Protein interactions for RNA: ENST00000566749.5

PPP4C-209, Transcript of protein phosphatase 4 catalytic subunit, human

TSL 5

Gene PPP4C, Length 1,490 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4C-209	ENST00000566749	DDX58	O95786	925 aa	Known RBP	31.65	■■■□□ 2.66
PPP4C-209	ENST00000566749	CNKSR1	Q969H4	720 aa		31.65	■■■□□ 2.66
PPP4C-209	ENST00000566749	SLC4A2	P04920	1241 aa		31.65	■■■□□ 2.66
PPP4C-209	ENST00000566749	ATP5J2-PTCD1	G3V325	749 aa		31.63	■■■□□ 2.65
PPP4C-209	ENST00000566749	NPR1	P16066	1061 aa		31.63	■■■□□ 2.65
PPP4C-209	ENST00000566749	TNRC6C	Q9HCJ0	1690 aa	Known RBP	31.62	■■■□□ 2.65
PPP4C-209	ENST00000566749		E9PSI1	815 aa		31.62	■■■□□ 2.65
PPP4C-209	ENST00000566749	ISCA1	Q9BUE6	129 aa		31.62	■■■□□ 2.65
PPP4C-209	ENST00000566749	TRMT112	Q9UI30	125 aa	Known RBP	31.62	■■■□□ 2.65
PPP4C-209	ENST00000566749	RNF123	Q5XPI4	1314 aa		31.62	■■■□□ 2.65
PPP4C-209	ENST00000566749	CACNA1S	Q13698	1873 aa		31.61	■■■□□ 2.65
PPP4C-209	ENST00000566749	ZNF428	Q96B54	188 aa		31.6	■■■□□ 2.65
PPP4C-209	ENST00000566749	RIC1	Q4ADV7	1423 aa		31.6	■■■□□ 2.65
PPP4C-209	ENST00000566749	ZNF219	Q9P2Y4	722 aa	Predicted RBP	31.59	■■■□□ 2.65
PPP4C-209	ENST00000566749	CACNA1F	O60840	1977 aa		31.59	■■■□□ 2.65
PPP4C-209	ENST00000566749	PRPF40B	Q6NWY9	871 aa	Known RBP	31.59	■■■□□ 2.65
PPP4C-209	ENST00000566749	G2E3	Q7L622	706 aa		31.59	■■■□□ 2.65
PPP4C-209	ENST00000566749	MYD88	Q99836	296 aa		31.59	■■■□□ 2.65
PPP4C-209	ENST00000566749	C21orf2	O43822	256 aa		31.58	■■■□□ 2.65
PPP4C-209	ENST00000566749	CRY2	Q49AN0	593 aa		31.58	■■■□□ 2.65
PPP4C-209	ENST00000566749	KSR2	Q6VAB6	950 aa		31.58	■■■□□ 2.65
PPP4C-209	ENST00000566749	NLRP3	Q96P20	1036 aa		31.58	■■■□□ 2.65
PPP4C-209	ENST00000566749	MAP3K2	Q9Y2U5	619 aa		31.58	■■■□□ 2.65
PPP4C-209	ENST00000566749	SH3TC1	Q8TE82	1336 aa		31.57	■■■□□ 2.65
PPP4C-209	ENST00000566749	SLX4	Q8IY92	1834 aa		31.57	■■■□□ 2.64
PPP4C-209	ENST00000566749	SLFN5	Q08AF3	891 aa		31.57	■■■□□ 2.64
PPP4C-209	ENST00000566749	TRIM28	Q13263	835 aa	Known RBP	31.57	■■■□□ 2.64
PPP4C-209	ENST00000566749	SLC10A5	Q5PT55	438 aa		31.57	■■■□□ 2.64
PPP4C-209	ENST00000566749	RPGR	Q92834	1020 aa	Known RBP	31.57	■■■□□ 2.64
PPP4C-209	ENST00000566749	PI4KAP2	A4QPH2	592 aa		31.56	■■■□□ 2.64
PPP4C-209	ENST00000566749	PI4KAP1	Q8N8J0	262 aa		31.56	■■■□□ 2.64
PPP4C-209	ENST00000566749	METTL22	Q9BUU2	404 aa	Predicted RBP	31.56	■■■□□ 2.64
PPP4C-209	ENST00000566749	ALDH1B1	P30837	517 aa		31.55	■■■□□ 2.64
PPP4C-209	ENST00000566749	FLII	Q13045	1269 aa		31.55	■■■□□ 2.64
PPP4C-209	ENST00000566749	SYNE4	Q8N205	404 aa		31.55	■■■□□ 2.64
PPP4C-209	ENST00000566749	ZNF784	Q8NCA9	323 aa	Predicted RBP	31.55	■■■□□ 2.64
PPP4C-209	ENST00000566749	CDCA7L	Q96GN5	454 aa		31.55	■■■□□ 2.64
PPP4C-209	ENST00000566749	HCLS1	P14317	486 aa	Predicted RBP	31.53	■■■□□ 2.64
PPP4C-209	ENST00000566749	FKBP5	Q13451	457 aa	Predicted RBP	31.52	■■■□□ 2.64
PPP4C-209	ENST00000566749	C3orf67	Q6ZVT6	689 aa		31.52	■■■□□ 2.64
PPP4C-209	ENST00000566749	FAM89A	Q96GI7	184 aa		31.52	■■■□□ 2.64
PPP4C-209	ENST00000566749	ADCY9	O60503	1353 aa		31.52	■■■□□ 2.64
PPP4C-209	ENST00000566749	RASSF7	Q02833	373 aa		31.51	■■■□□ 2.63
PPP4C-209	ENST00000566749	NEXN	Q0ZGT2	675 aa		31.51	■■■□□ 2.63
PPP4C-209	ENST00000566749	RTL5	Q5HYW3	569 aa	Predicted RBP	31.51	■■■□□ 2.63
PPP4C-209	ENST00000566749	CCDC191	Q8NCU4	936 aa		31.51	■■■□□ 2.63
PPP4C-209	ENST00000566749	RBM17	Q96I25	401 aa	Known RBP	31.51	■■■□□ 2.63
PPP4C-209	ENST00000566749	HOXA10	P31260	410 aa	Predicted RBP	31.5	■■■□□ 2.63
PPP4C-209	ENST00000566749	SOGA3	Q5TF21	947 aa		31.5	■■■□□ 2.63
PPP4C-209	ENST00000566749	C9orf131	Q5VYM1	1079 aa		31.5	■■■□□ 2.63
PPP4C-209	ENST00000566749	CWC25	Q9NXE8	425 aa	Predicted RBP	31.49	■■■□□ 2.63
PPP4C-209	ENST00000566749	SBF1	O95248	1867 aa		31.48	■■■□□ 2.63
PPP4C-209	ENST00000566749	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	31.47	■■■□□ 2.63
PPP4C-209	ENST00000566749	C7orf43	Q8WVR3	580 aa		31.47	■■■□□ 2.63
PPP4C-209	ENST00000566749	RNF181	Q9P0P0	153 aa		31.47	■■■□□ 2.63
PPP4C-209	ENST00000566749	LAMB2	P55268	1798 aa		31.47	■■■□□ 2.63
PPP4C-209	ENST00000566749	NFKBIE	O00221	500 aa		31.46	■■■□□ 2.63
PPP4C-209	ENST00000566749	CRAMP1	Q96RY5	1269 aa		31.46	■■■□□ 2.63
PPP4C-209	ENST00000566749	FER1L6	Q2WGJ9	1857 aa		31.46	■■■□□ 2.63
PPP4C-209	ENST00000566749	TRMT2A	Q8IZ69	625 aa	Known RBP	31.46	■■■□□ 2.63
PPP4C-209	ENST00000566749	DDX60	Q8IY21	1712 aa	Known RBP	31.45	■■■□□ 2.63
PPP4C-209	ENST00000566749	IRS4	O14654	1257 aa	Predicted RBP	31.45	■■■□□ 2.62
PPP4C-209	ENST00000566749	IGKV5-2	P06315	115 aa		31.45	■■■□□ 2.62
PPP4C-209	ENST00000566749	HNRNPU	Q00839	825 aa	Known RBP eCLIP	31.45	■■■□□ 2.62
PPP4C-209	ENST00000566749	CCDC93	Q567U6	631 aa		31.45	■■■□□ 2.62
PPP4C-209	ENST00000566749	LMNB1	P20700	586 aa		31.44	■■■□□ 2.62
PPP4C-209	ENST00000566749	DNAAF4	Q8WXU2	420 aa		31.44	■■■□□ 2.62
PPP4C-209	ENST00000566749	PCCA	P05165	728 aa	Predicted RBP	31.43	■■■□□ 2.62
PPP4C-209	ENST00000566749	TAOK3	Q9H2K8	898 aa		31.43	■■■□□ 2.62
PPP4C-209	ENST00000566749	CWF19L2	Q2TBE0	894 aa	Known RBP	31.42	■■■□□ 2.62
PPP4C-209	ENST00000566749	OLFM4	Q6UX06	510 aa		31.42	■■■□□ 2.62
PPP4C-209	ENST00000566749	CCDC88A	Q3V6T2	1871 aa		31.42	■■■□□ 2.62
PPP4C-209	ENST00000566749	HSP90B1	P14625	803 aa	Known RBP	31.41	■■■□□ 2.62
PPP4C-209	ENST00000566749	DDX46	Q7L014	1031 aa	Known RBP	31.41	■■■□□ 2.62
PPP4C-209	ENST00000566749	ZNF526	Q8TF50	670 aa	Predicted RBP	31.41	■■■□□ 2.62
PPP4C-209	ENST00000566749	JARID2	Q92833	1246 aa	Predicted RBP	31.41	■■■□□ 2.62
PPP4C-209	ENST00000566749	ABCC4	O15439	1325 aa		31.41	■■■□□ 2.62
PPP4C-209	ENST00000566749	NEURL1B	A8MQ27	555 aa		31.4	■■■□□ 2.62
PPP4C-209	ENST00000566749	PPEF1	O14829	653 aa	Predicted RBP	31.4	■■■□□ 2.62
PPP4C-209	ENST00000566749	PRELP	P51888	382 aa		31.4	■■■□□ 2.62
PPP4C-209	ENST00000566749	LTBP3	Q9NS15	1303 aa		31.4	■■■□□ 2.62
PPP4C-209	ENST00000566749	RTKN2	Q8IZC4	609 aa		31.4	■■■□□ 2.62
PPP4C-209	ENST00000566749		F6X3S4	739 aa		31.39	■■■□□ 2.62
PPP4C-209	ENST00000566749	SF3B3	Q15393	1217 aa	Known RBP	31.38	■■■□□ 2.61
PPP4C-209	ENST00000566749	CC2D2B	Q6DHV5	1058 aa		31.38	■■■□□ 2.61
PPP4C-209	ENST00000566749	LINS1	Q8NG48	757 aa		31.37	■■■□□ 2.61
PPP4C-209	ENST00000566749	TMX4	Q9H1E5	349 aa	Predicted RBP	31.37	■■■□□ 2.61
PPP4C-209	ENST00000566749	GPBP1L1	Q9HC44	474 aa	Predicted RBP	31.37	■■■□□ 2.61
PPP4C-209	ENST00000566749	MRPL50	Q8N5N7	158 aa	Known RBP	31.36	■■■□□ 2.61
PPP4C-209	ENST00000566749	SSH1	Q8WYL5	1049 aa		31.36	■■■□□ 2.61
PPP4C-209	ENST00000566749	BBOX1	O75936	387 aa		31.35	■■■□□ 2.61
PPP4C-209	ENST00000566749	FKBP4	Q02790	459 aa	Known RBP eCLIP	31.35	■■■□□ 2.61
PPP4C-209	ENST00000566749	GRAP	Q13588	217 aa		31.35	■■■□□ 2.61
PPP4C-209	ENST00000566749	GRAPL	Q8TC17	118 aa	Predicted RBP	31.35	■■■□□ 2.61
PPP4C-209	ENST00000566749	CDHR2	Q9BYE9	1310 aa		31.35	■■■□□ 2.61
PPP4C-209	ENST00000566749	PDE8A	O60658	829 aa		31.34	■■■□□ 2.61
PPP4C-209	ENST00000566749	CT47B1	P0C2W7	299 aa	Predicted RBP	31.34	■■■□□ 2.61
PPP4C-209	ENST00000566749	GCKR	Q14397	625 aa		31.34	■■■□□ 2.61
PPP4C-209	ENST00000566749	BCL2L13	Q9BXK5	485 aa		31.34	■■■□□ 2.61
PPP4C-209	ENST00000566749	TAF1	P21675	1872 aa		31.34	■■■□□ 2.61

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