RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 IARSP41252 1262 aaKnown RBP36.17■■■■□ 3.38
UBFD1-206ENST00000566669 CHADLQ6NUI6 762 aa36.17■■■■□ 3.38
UBFD1-206ENST00000566669 ZNF277Q9NRM2 450 aaPredicted RBP36.17■■■■□ 3.38
UBFD1-206ENST00000566669 CHL1O00533 1208 aa36.16■■■■□ 3.38
UBFD1-206ENST00000566669 HTRA3P83110 453 aa36.15■■■■□ 3.38
UBFD1-206ENST00000566669 SYNE4Q8N205 404 aa36.15■■■■□ 3.38
UBFD1-206ENST00000566669 JDP2Q8WYK2 163 aa36.15■■■■□ 3.38
UBFD1-206ENST00000566669 NLRP3Q96P20 1036 aa36.15■■■■□ 3.38
UBFD1-206ENST00000566669 TMX4Q9H1E5 349 aaPredicted RBP36.15■■■■□ 3.38
UBFD1-206ENST00000566669 HOXB7P09629 217 aa36.14■■■■□ 3.38
UBFD1-206ENST00000566669 UTP14AQ9BVJ6 771 aaKnown RBP36.14■■■■□ 3.38
UBFD1-206ENST00000566669 NEUROD2Q15784 382 aa36.13■■■■□ 3.37
UBFD1-206ENST00000566669 DDX21Q9NR30 783 aaKnown RBP eCLIP36.13■■■■□ 3.37
UBFD1-206ENST00000566669 FZD9O00144 591 aa36.12■■■■□ 3.37
UBFD1-206ENST00000566669 SLC10A5Q5PT55 438 aa36.12■■■■□ 3.37
UBFD1-206ENST00000566669 LDHDQ86WU2 507 aa36.12■■■■□ 3.37
UBFD1-206ENST00000566669 CCDC146Q8IYE0 955 aa36.12■■■■□ 3.37
UBFD1-206ENST00000566669 SCN4AP35499 1836 aa36.11■■■■□ 3.37
UBFD1-206ENST00000566669 SNED1Q8TER0 1413 aa36.1■■■■□ 3.37
UBFD1-206ENST00000566669 OLFM4Q6UX06 510 aa36.1■■■■□ 3.37
UBFD1-206ENST00000566669 TAF1DQ9H5J8 278 aaPredicted RBP36.1■■■■□ 3.37
UBFD1-206ENST00000566669 COPS6Q7L5N1 327 aa36.09■■■■□ 3.37
UBFD1-206ENST00000566669 GPC2Q8N158 579 aa36.09■■■■□ 3.37
UBFD1-206ENST00000566669 ADAMTS8Q9UP79 889 aa36.09■■■■□ 3.37
UBFD1-206ENST00000566669 TRIM35Q9UPQ4 493 aa36.09■■■■□ 3.37
UBFD1-206ENST00000566669 VPS33BQ9H267 617 aa36.08■■■■□ 3.37
UBFD1-206ENST00000566669 HACL1Q9UJ83 578 aa36.08■■■■□ 3.37
UBFD1-206ENST00000566669 PPEF1O14829 653 aaPredicted RBP36.07■■■■□ 3.36
UBFD1-206ENST00000566669 PROSER3Q2NL68 480 aa36.07■■■■□ 3.36
UBFD1-206ENST00000566669 PNMA8AQ86V59 439 aaPredicted RBP36.07■■■■□ 3.36
UBFD1-206ENST00000566669 PRKRIP1Q9H875 184 aaPredicted RBP36.07■■■■□ 3.36
UBFD1-206ENST00000566669 XAGE3Q8WTP9 111 aa36.06■■■■□ 3.36
UBFD1-206ENST00000566669 CREBZFQ9NS37 354 aa36.06■■■■□ 3.36
UBFD1-206ENST00000566669 ZNF541Q9H0D2 1346 aa36.06■■■■□ 3.36
UBFD1-206ENST00000566669 EIF6P56537 245 aaKnown RBP36.05■■■■□ 3.36
UBFD1-206ENST00000566669 CFAP44Q96MT7 982 aa36.05■■■■□ 3.36
UBFD1-206ENST00000566669 TCIRG1Q13488 830 aa36.04■■■■□ 3.36
UBFD1-206ENST00000566669 LAS1LQ9Y4W2 734 aaKnown RBP36.04■■■■□ 3.36
UBFD1-206ENST00000566669 CALD1Q05682 793 aaKnown RBP36.03■■■■□ 3.36
UBFD1-206ENST00000566669 DBF4Q9UBU7 674 aaPredicted RBP36.03■■■■□ 3.36
UBFD1-206ENST00000566669 ANXA1P04083 346 aa36.02■■■■□ 3.36
UBFD1-206ENST00000566669 AIMP1Q12904 312 aaKnown RBP36.02■■■■□ 3.36
UBFD1-206ENST00000566669 HDGFL1Q5TGJ6 251 aa36.02■■■■□ 3.36
UBFD1-206ENST00000566669 NLRP10Q86W26 655 aa36.02■■■■□ 3.36
UBFD1-206ENST00000566669 BBOX1O75936 387 aa36.01■■■■□ 3.36
UBFD1-206ENST00000566669 SUPT20HQ8NEM7 779 aa36.01■■■■□ 3.36
UBFD1-206ENST00000566669 NECTIN2Q92692 538 aa36.01■■■■□ 3.36
UBFD1-206ENST00000566669 ATP6V0A2Q9Y487 856 aa36.01■■■■□ 3.36
UBFD1-206ENST00000566669 EPHX2P34913 555 aa36■■■■□ 3.35
UBFD1-206ENST00000566669 LARGE2Q8N3Y3 721 aa36■■■■□ 3.35
UBFD1-206ENST00000566669 SH3TC1Q8TE82 1336 aa36■■■■□ 3.35
UBFD1-206ENST00000566669 PLBD2Q8NHP8 589 aa35.99■■■■□ 3.35
UBFD1-206ENST00000566669 TRMT112Q9UI30 125 aaKnown RBP35.99■■■■□ 3.35
UBFD1-206ENST00000566669 POTEIP0CG38 1075 aa35.98■■■■□ 3.35
UBFD1-206ENST00000566669 POTEJP0CG39 1038 aa35.98■■■■□ 3.35
UBFD1-206ENST00000566669 CHMP4AQ9BY43 222 aa35.98■■■■□ 3.35
UBFD1-206ENST00000566669 HYPKQ9NX55 129 aa35.98■■■■□ 3.35
UBFD1-206ENST00000566669 CHPF2Q9P2E5 772 aa35.98■■■■□ 3.35
UBFD1-206ENST00000566669 TMC4Q7Z404 712 aa35.97■■■■□ 3.35
UBFD1-206ENST00000566669 ANKRD36CQ5JPF3 1778 aa35.97■■■■□ 3.35
UBFD1-206ENST00000566669 LMOD1P29536 600 aaPredicted RBP35.96■■■■□ 3.35
UBFD1-206ENST00000566669 EAPPQ56P03 285 aaPredicted RBP35.96■■■■□ 3.35
UBFD1-206ENST00000566669 ANKRD13DQ6ZTN6 518 aa35.96■■■■□ 3.35
UBFD1-206ENST00000566669 C3orf67Q6ZVT6 689 aa35.96■■■■□ 3.35
UBFD1-206ENST00000566669 PASKQ96RG2 1323 aa35.96■■■■□ 3.35
UBFD1-206ENST00000566669 ABCC4O15439 1325 aa35.95■■■■□ 3.35
UBFD1-206ENST00000566669 DDX46Q7L014 1031 aaKnown RBP35.95■■■■□ 3.35
UBFD1-206ENST00000566669 NIM1KQ8IY84 436 aa35.95■■■■□ 3.35
UBFD1-206ENST00000566669 KRT24Q2M2I5 525 aa35.94■■■■□ 3.34
UBFD1-206ENST00000566669 SP8Q8IXZ3 490 aa35.94■■■■□ 3.34
UBFD1-206ENST00000566669 CLEC11AQ9Y240 323 aa35.94■■■■□ 3.34
UBFD1-206ENST00000566669 RTFDC1Q9BY42 306 aaPredicted RBP35.93■■■■□ 3.34
UBFD1-206ENST00000566669 GNAI1P63096 354 aa35.92■■■■□ 3.34
UBFD1-206ENST00000566669 DUSP27Q5VZP5 1158 aa35.92■■■■□ 3.34
UBFD1-206ENST00000566669 IFT57Q9NWB7 429 aa35.92■■■■□ 3.34
UBFD1-206ENST00000566669 PPIP5K2O43314 1243 aa35.91■■■■□ 3.34
UBFD1-206ENST00000566669 TCERG1O14776 1098 aaKnown RBP35.9■■■■□ 3.34
UBFD1-206ENST00000566669 ITGBL1O95965 494 aaPredicted RBP35.9■■■■□ 3.34
UBFD1-206ENST00000566669 ZNF853P0CG23 659 aa35.9■■■■□ 3.34
UBFD1-206ENST00000566669 MBIPQ9NS73 344 aa35.9■■■■□ 3.34
UBFD1-206ENST00000566669 GJA3Q9Y6H8 435 aa35.9■■■■□ 3.34
UBFD1-206ENST00000566669 PCNTO95613 3336 aa35.9■■■■□ 3.34
UBFD1-206ENST00000566669 HCLS1P14317 486 aaPredicted RBP35.89■■■■□ 3.34
UBFD1-206ENST00000566669 GRAPQ13588 217 aa35.89■■■■□ 3.34
UBFD1-206ENST00000566669 DPP8Q6V1X1 898 aaPredicted RBP35.89■■■■□ 3.34
UBFD1-206ENST00000566669 GRAPLQ8TC17 118 aaPredicted RBP35.89■■■■□ 3.34
UBFD1-206ENST00000566669 TMEM88BA6NKF7 163 aa35.88■■■■□ 3.33
UBFD1-206ENST00000566669 HSP90B1P14625 803 aaKnown RBP35.88■■■■□ 3.33
UBFD1-206ENST00000566669 ISCA1Q9BUE6 129 aa35.88■■■■□ 3.33
UBFD1-206ENST00000566669 TRIM28Q13263 835 aaKnown RBP35.87■■■■□ 3.33
UBFD1-206ENST00000566669 MPNDQ8N594 471 aa35.87■■■■□ 3.33
UBFD1-206ENST00000566669 APAF1O14727 1248 aa35.86■■■■□ 3.33
UBFD1-206ENST00000566669 CNTROBQ8N137 903 aa35.86■■■■□ 3.33
UBFD1-206ENST00000566669 ZNRF3Q9ULT6 936 aa35.86■■■■□ 3.33
UBFD1-206ENST00000566669 ADAMTSL1Q8N6G6 1762 aa35.86■■■■□ 3.33
UBFD1-206ENST00000566669 CNTNAP1P78357 1384 aa35.85■■■■□ 3.33
UBFD1-206ENST00000566669 USP50Q70EL3 339 aaPredicted RBP35.84■■■■□ 3.33
UBFD1-206ENST00000566669 COL4A5P29400 1685 aa35.84■■■■□ 3.33
UBFD1-206ENST00000566669 HSPA1AP0DMV8 641 aaKnown RBP35.83■■■■□ 3.33
UBFD1-206ENST00000566669 HSPA1BP0DMV9 641 aaKnown RBP35.83■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms