RNA–Protein interactions for RNA: ENST00000566247.1

TRADD-205, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-205ENST00000566247 COL11A2P13942 1736 aaPredicted RBP23.21■■□□□ 1.31
TRADD-205ENST00000566247 NPR1P16066 1061 aa23.2■■□□□ 1.3
TRADD-205ENST00000566247 SLFN5Q08AF3 891 aa23.19■■□□□ 1.3
TRADD-205ENST00000566247 ZNF428Q96B54 188 aa23.19■■□□□ 1.3
TRADD-205ENST00000566247 MYD88Q99836 296 aa23.19■■□□□ 1.3
TRADD-205ENST00000566247 ISCA1Q9BUE6 129 aa23.19■■□□□ 1.3
TRADD-205ENST00000566247 CHD4Q14839 1912 aa23.19■■□□□ 1.3
TRADD-205ENST00000566247 ARFGEF2Q9Y6D5 1785 aa23.19■■□□□ 1.3
TRADD-205ENST00000566247 RIC1Q4ADV7 1423 aa23.18■■□□□ 1.3
TRADD-205ENST00000566247 KLRG2A4D1S0 409 aaPredicted RBP23.18■■□□□ 1.3
TRADD-205ENST00000566247 KSR2Q6VAB6 950 aa23.18■■□□□ 1.3
TRADD-205ENST00000566247 G2E3Q7L622 706 aa23.18■■□□□ 1.3
TRADD-205ENST00000566247 ZNF219Q9P2Y4 722 aaPredicted RBP23.18■■□□□ 1.3
TRADD-205ENST00000566247 MAP3K2Q9Y2U5 619 aa23.18■■□□□ 1.3
TRADD-205ENST00000566247 ARFGEF1Q9Y6D6 1849 aa23.17■■□□□ 1.3
TRADD-205ENST00000566247 SH3TC1Q8TE82 1336 aa23.17■■□□□ 1.3
TRADD-205ENST00000566247 FLIIQ13045 1269 aa23.17■■□□□ 1.3
TRADD-205ENST00000566247 RPGRQ92834 1020 aaKnown RBP23.17■■□□□ 1.3
TRADD-205ENST00000566247 CDCA7LQ96GN5 454 aa23.17■■□□□ 1.3
TRADD-205ENST00000566247 TNRC6CQ9HCJ0 1690 aaKnown RBP23.16■■□□□ 1.3
TRADD-205ENST00000566247 GOLGB1Q14789 3259 aaKnown RBP23.16■■□□□ 1.3
TRADD-205ENST00000566247 PI4KAP2A4QPH2 592 aa23.16■■□□□ 1.3
TRADD-205ENST00000566247 FKBP5Q13451 457 aaPredicted RBP23.16■■□□□ 1.3
TRADD-205ENST00000566247 PRPF40BQ6NWY9 871 aaKnown RBP23.16■■□□□ 1.3
TRADD-205ENST00000566247 PI4KAP1Q8N8J0 262 aa23.16■■□□□ 1.3
TRADD-205ENST00000566247 NLRP3Q96P20 1036 aa23.16■■□□□ 1.3
TRADD-205ENST00000566247 METTL22Q9BUU2 404 aaPredicted RBP23.16■■□□□ 1.3
TRADD-205ENST00000566247 HNRNPUQ00839 825 aaKnown RBP eCLIP23.15■■□□□ 1.3
TRADD-205ENST00000566247 NEXNQ0ZGT2 675 aa23.15■■□□□ 1.3
TRADD-205ENST00000566247 C21orf2O43822 256 aa23.14■■□□□ 1.29
TRADD-205ENST00000566247 HCLS1P14317 486 aaPredicted RBP23.14■■□□□ 1.29
TRADD-205ENST00000566247 TRIM28Q13263 835 aaKnown RBP23.14■■□□□ 1.29
TRADD-205ENST00000566247 CRY2Q49AN0 593 aa23.14■■□□□ 1.29
TRADD-205ENST00000566247 SLC10A5Q5PT55 438 aa23.14■■□□□ 1.29
TRADD-205ENST00000566247 ADCY9O60503 1353 aa23.14■■□□□ 1.29
TRADD-205ENST00000566247 ALDH1B1P30837 517 aa23.13■■□□□ 1.29
TRADD-205ENST00000566247 UTRNP46939 3433 aa23.13■■□□□ 1.29
TRADD-205ENST00000566247 RTL5Q5HYW3 569 aaPredicted RBP23.12■■□□□ 1.29
TRADD-205ENST00000566247 SYNE4Q8N205 404 aa23.12■■□□□ 1.29
TRADD-205ENST00000566247 CCDC191Q8NCU4 936 aa23.12■■□□□ 1.29
TRADD-205ENST00000566247 FAM89AQ96GI7 184 aa23.12■■□□□ 1.29
TRADD-205ENST00000566247 RBM17Q96I25 401 aaKnown RBP23.12■■□□□ 1.29
TRADD-205ENST00000566247 CWC25Q9NXE8 425 aaPredicted RBP23.12■■□□□ 1.29
TRADD-205ENST00000566247 SOGA3Q5TF21 947 aa23.11■■□□□ 1.29
TRADD-205ENST00000566247 C3orf67Q6ZVT6 689 aa23.11■■□□□ 1.29
TRADD-205ENST00000566247 RASSF7Q02833 373 aa23.1■■□□□ 1.29
TRADD-205ENST00000566247 ZBTB38Q8NAP3 1195 aaPredicted RBP23.09■■□□□ 1.29
TRADD-205ENST00000566247 DNAAF4Q8WXU2 420 aa23.09■■□□□ 1.29
TRADD-205ENST00000566247 IRS4O14654 1257 aaPredicted RBP23.08■■□□□ 1.29
TRADD-205ENST00000566247 HSP90B1P14625 803 aaKnown RBP23.08■■□□□ 1.29
TRADD-205ENST00000566247 HOXA10P31260 410 aaPredicted RBP23.08■■□□□ 1.29
TRADD-205ENST00000566247 C9orf131Q5VYM1 1079 aa23.08■■□□□ 1.29
TRADD-205ENST00000566247 TRMT2AQ8IZ69 625 aaKnown RBP23.08■■□□□ 1.29
TRADD-205ENST00000566247 CACNA1SQ13698 1873 aa23.08■■□□□ 1.29
TRADD-205ENST00000566247 SLX4Q8IY92 1834 aa23.08■■□□□ 1.28
TRADD-205ENST00000566247 CCDC93Q567U6 631 aa23.07■■□□□ 1.28
TRADD-205ENST00000566247 ZNF784Q8NCA9 323 aaPredicted RBP23.07■■□□□ 1.28
TRADD-205ENST00000566247 CRAMP1Q96RY5 1269 aa23.07■■□□□ 1.28
TRADD-205ENST00000566247 RNF181Q9P0P0 153 aa23.07■■□□□ 1.28
TRADD-205ENST00000566247 PCCAP05165 728 aaPredicted RBP23.06■■□□□ 1.28
TRADD-205ENST00000566247 IGKV5-2P06315 115 aa23.06■■□□□ 1.28
TRADD-205ENST00000566247 CWF19L2Q2TBE0 894 aaKnown RBP23.06■■□□□ 1.28
TRADD-205ENST00000566247 DDX46Q7L014 1031 aaKnown RBP23.06■■□□□ 1.28
TRADD-205ENST00000566247 CACNA1FO60840 1977 aa23.06■■□□□ 1.28
TRADD-205ENST00000566247 NEURL1BA8MQ27 555 aa23.05■■□□□ 1.28
TRADD-205ENST00000566247 NFKBIEO00221 500 aa23.05■■□□□ 1.28
TRADD-205ENST00000566247 TAOK3Q9H2K8 898 aa23.05■■□□□ 1.28
TRADD-205ENST00000566247 F6X3S4 739 aa23.04■■□□□ 1.28
TRADD-205ENST00000566247 PPEF1O14829 653 aaPredicted RBP23.04■■□□□ 1.28
TRADD-205ENST00000566247 LMNB1P20700 586 aa23.04■■□□□ 1.28
TRADD-205ENST00000566247 MRPL50Q8N5N7 158 aaKnown RBP23.04■■□□□ 1.28
TRADD-205ENST00000566247 C7orf43Q8WVR3 580 aa23.04■■□□□ 1.28
TRADD-205ENST00000566247 JARID2Q92833 1246 aaPredicted RBP23.04■■□□□ 1.28
TRADD-205ENST00000566247 TMX4Q9H1E5 349 aaPredicted RBP23.04■■□□□ 1.28
TRADD-205ENST00000566247 ABCC4O15439 1325 aa23.04■■□□□ 1.28
TRADD-205ENST00000566247 CT47B1P0C2W7 299 aaPredicted RBP23.03■■□□□ 1.28
TRADD-205ENST00000566247 LINS1Q8NG48 757 aa23.03■■□□□ 1.28
TRADD-205ENST00000566247 SSH1Q8WYL5 1049 aa23.03■■□□□ 1.28
TRADD-205ENST00000566247 BCL2L13Q9BXK5 485 aa23.03■■□□□ 1.28
TRADD-205ENST00000566247 ALDH1L2Q3SY69 923 aa23.02■■□□□ 1.28
TRADD-205ENST00000566247 OLFM4Q6UX06 510 aa23.02■■□□□ 1.28
TRADD-205ENST00000566247 RTKN2Q8IZC4 609 aa23.02■■□□□ 1.28
TRADD-205ENST00000566247 SMC4Q9NTJ3 1288 aa23.02■■□□□ 1.28
TRADD-205ENST00000566247 DDX60Q8IY21 1712 aaKnown RBP23.02■■□□□ 1.28
TRADD-205ENST00000566247 PDE8AO60658 829 aa23.01■■□□□ 1.27
TRADD-205ENST00000566247 GCKRQ14397 625 aa23.01■■□□□ 1.27
TRADD-205ENST00000566247 SF3B3Q15393 1217 aaKnown RBP23.01■■□□□ 1.27
TRADD-205ENST00000566247 CC2D2BQ6DHV5 1058 aa23.01■■□□□ 1.27
TRADD-205ENST00000566247 SLC4A10Q6U841 1118 aa23.01■■□□□ 1.27
TRADD-205ENST00000566247 ZNF526Q8TF50 670 aaPredicted RBP23.01■■□□□ 1.27
TRADD-205ENST00000566247 CDHR2Q9BYE9 1310 aa23.01■■□□□ 1.27
TRADD-205ENST00000566247 LTBP3Q9NS15 1303 aa23.01■■□□□ 1.27
TRADD-205ENST00000566247 LAMB2P55268 1798 aa23.01■■□□□ 1.27
TRADD-205ENST00000566247 GRAPQ13588 217 aa23■■□□□ 1.27
TRADD-205ENST00000566247 GRAPLQ8TC17 118 aaPredicted RBP23■■□□□ 1.27
TRADD-205ENST00000566247 BBOX1O75936 387 aa22.99■■□□□ 1.27
TRADD-205ENST00000566247 FKBP4Q02790 459 aaKnown RBP eCLIP22.99■■□□□ 1.27
TRADD-205ENST00000566247 UBE3BQ7Z3V4 1068 aa22.99■■□□□ 1.27
TRADD-205ENST00000566247 PTPRCP08575 1304 aa22.99■■□□□ 1.27
TRADD-205ENST00000566247 CCDC152Q4G0S7 254 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms