RNA–Protein interactions for RNA: ENST00000566086.1

EIF3C-208, Transcript of eukaryotic translation initiation factor 3 subunit C, humanhuman

TSL 2

Gene EIF3C, Length 424 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3C-208ENST00000566086 GRM1Q13255 1194 aa13.66□□□□□ -0.22
EIF3C-208ENST00000566086 PNMA8AQ86V59 439 aaPredicted RBP13.66□□□□□ -0.22
EIF3C-208ENST00000566086 TAF1P21675 1872 aa13.65□□□□□ -0.22
EIF3C-208ENST00000566086 TRAF5O00463 557 aa13.65□□□□□ -0.22
EIF3C-208ENST00000566086 GPTP24298 496 aa13.65□□□□□ -0.22
EIF3C-208ENST00000566086 EPS15P42566 896 aa13.65□□□□□ -0.22
EIF3C-208ENST00000566086 TTLL7Q6ZT98 887 aa13.65□□□□□ -0.22
EIF3C-208ENST00000566086 PAXIP1Q6ZW49 1069 aaPredicted RBP13.65□□□□□ -0.22
EIF3C-208ENST00000566086 ABHD8Q96I13 439 aa13.65□□□□□ -0.22
EIF3C-208ENST00000566086 CFAP53Q96M91 514 aa13.65□□□□□ -0.22
EIF3C-208ENST00000566086 DDX21Q9NR30 783 aaKnown RBP eCLIP13.65□□□□□ -0.22
EIF3C-208ENST00000566086 SCNN1DP51172 638 aa13.64□□□□□ -0.23
EIF3C-208ENST00000566086 CRY2Q49AN0 593 aa13.64□□□□□ -0.23
EIF3C-208ENST00000566086 C3orf67Q6ZVT6 689 aa13.64□□□□□ -0.23
EIF3C-208ENST00000566086 JDP2Q8WYK2 163 aa13.64□□□□□ -0.23
EIF3C-208ENST00000566086 PSMD1Q99460 953 aa13.64□□□□□ -0.23
EIF3C-208ENST00000566086 TSKSQ9UJT2 592 aa13.64□□□□□ -0.23
EIF3C-208ENST00000566086 RRP7AQ9Y3A4 280 aaKnown RBP13.64□□□□□ -0.23
EIF3C-208ENST00000566086 UBN2Q6ZU65 1347 aa13.64□□□□□ -0.23
EIF3C-208ENST00000566086 PPP2R1AP30153 589 aa13.63□□□□□ -0.23
EIF3C-208ENST00000566086 TAF7Q15545 349 aaPredicted RBP13.63□□□□□ -0.23
EIF3C-208ENST00000566086 FAM161AQ3B820 660 aa13.63□□□□□ -0.23
EIF3C-208ENST00000566086 CYP4F22Q6NT55 531 aa13.63□□□□□ -0.23
EIF3C-208ENST00000566086 ZBTB3Q9H5J0 574 aa13.63□□□□□ -0.23
EIF3C-208ENST00000566086 TNRC18O15417 2968 aaPredicted RBP13.63□□□□□ -0.23
EIF3C-208ENST00000566086 CASP8AP2Q9UKL3 1982 aa13.62□□□□□ -0.23
EIF3C-208ENST00000566086 MYL6BP14649 208 aa13.62□□□□□ -0.23
EIF3C-208ENST00000566086 EIF6P56537 245 aaKnown RBP13.62□□□□□ -0.23
EIF3C-208ENST00000566086 LARGE2Q8N3Y3 721 aa13.62□□□□□ -0.23
EIF3C-208ENST00000566086 RPGRQ92834 1020 aaKnown RBP13.62□□□□□ -0.23
EIF3C-208ENST00000566086 CAPNS2Q96L46 248 aa13.62□□□□□ -0.23
EIF3C-208ENST00000566086 NUDCQ9Y266 331 aa13.62□□□□□ -0.23
EIF3C-208ENST00000566086 ANKRD36CQ5JPF3 1778 aa13.62□□□□□ -0.23
EIF3C-208ENST00000566086 MAP3K15Q6ZN16 1313 aa13.62□□□□□ -0.23
EIF3C-208ENST00000566086 PPEF1O14829 653 aaPredicted RBP13.61□□□□□ -0.23
EIF3C-208ENST00000566086 RGL2O15211 777 aa13.61□□□□□ -0.23
EIF3C-208ENST00000566086 AOC2O75106 756 aa13.61□□□□□ -0.23
EIF3C-208ENST00000566086 LMOD1P29536 600 aaPredicted RBP13.61□□□□□ -0.23
EIF3C-208ENST00000566086 MAP2K1Q02750 393 aaPredicted RBP13.61□□□□□ -0.23
EIF3C-208ENST00000566086 SUSD4Q5VX71 490 aa13.61□□□□□ -0.23
EIF3C-208ENST00000566086 CST9Q5W186 159 aa13.61□□□□□ -0.23
EIF3C-208ENST00000566086 THUMPD2Q9BTF0 503 aaKnown RBP13.61□□□□□ -0.23
EIF3C-208ENST00000566086 NYXQ9GZU5 481 aa13.61□□□□□ -0.23
EIF3C-208ENST00000566086 RIC1Q4ADV7 1423 aa13.61□□□□□ -0.23
EIF3C-208ENST00000566086 HOXA10P31260 410 aaPredicted RBP13.6□□□□□ -0.23
EIF3C-208ENST00000566086 AOC3Q16853 763 aa13.6□□□□□ -0.23
EIF3C-208ENST00000566086 ERVV-1B6SEH8 477 aa13.59□□□□□ -0.23
EIF3C-208ENST00000566086 HTATSF1O43719 755 aaKnown RBP13.59□□□□□ -0.23
EIF3C-208ENST00000566086 NTSR2O95665 410 aa13.59□□□□□ -0.23
EIF3C-208ENST00000566086 EIF4A1P60842 406 aaKnown RBP13.59□□□□□ -0.23
EIF3C-208ENST00000566086 KIF6Q6ZMV9 814 aa13.59□□□□□ -0.23
EIF3C-208ENST00000566086 GPR101Q96P66 508 aaPredicted RBP13.59□□□□□ -0.23
EIF3C-208ENST00000566086 CCDC85CA6NKD9 419 aa13.58□□□□□ -0.24
EIF3C-208ENST00000566086 PPIP5K2O43314 1243 aa13.58□□□□□ -0.24
EIF3C-208ENST00000566086 CC2D2BQ6DHV5 1058 aa13.58□□□□□ -0.24
EIF3C-208ENST00000566086 NIM1KQ8IY84 436 aa13.58□□□□□ -0.24
EIF3C-208ENST00000566086 ZNF34Q8IZ26 560 aa13.58□□□□□ -0.24
EIF3C-208ENST00000566086 RBM17Q96I25 401 aaKnown RBP13.58□□□□□ -0.24
EIF3C-208ENST00000566086 IBTKQ9P2D0 1353 aaPredicted RBP13.58□□□□□ -0.24
EIF3C-208ENST00000566086 USP50Q70EL3 339 aaPredicted RBP13.57□□□□□ -0.24
EIF3C-208ENST00000566086 CRAMP1Q96RY5 1269 aa13.57□□□□□ -0.24
EIF3C-208ENST00000566086 TLL2Q9Y6L7 1015 aa13.57□□□□□ -0.24
EIF3C-208ENST00000566086 POLR2AP24928 1970 aaKnown RBP13.57□□□□□ -0.24
EIF3C-208ENST00000566086 CXCL9Q07325 125 aa13.56□□□□□ -0.24
EIF3C-208ENST00000566086 ZNF428Q96B54 188 aa13.56□□□□□ -0.24
EIF3C-208ENST00000566086 BEGAINQ9BUH8 593 aa13.56□□□□□ -0.24
EIF3C-208ENST00000566086 GLIS2Q9BZE0 524 aaPredicted RBP13.56□□□□□ -0.24
EIF3C-208ENST00000566086 GPRC5DQ9NZD1 345 aa13.56□□□□□ -0.24
EIF3C-208ENST00000566086 ABCC4O15439 1325 aa13.56□□□□□ -0.24
EIF3C-208ENST00000566086 DDX60Q8IY21 1712 aaKnown RBP13.56□□□□□ -0.24
EIF3C-208ENST00000566086 SHTN1A0MZ66 631 aa13.55□□□□□ -0.24
EIF3C-208ENST00000566086 CELF2O95319 508 aaKnown RBP13.55□□□□□ -0.24
EIF3C-208ENST00000566086 ANXA1P04083 346 aa13.55□□□□□ -0.24
EIF3C-208ENST00000566086 ECE1P42892 770 aa13.55□□□□□ -0.24
EIF3C-208ENST00000566086 GMPSP49915 693 aaPredicted RBP13.55□□□□□ -0.24
EIF3C-208ENST00000566086 DLK2Q6UY11 383 aa13.55□□□□□ -0.24
EIF3C-208ENST00000566086 GIGYF2Q6Y7W6 1299 aaKnown RBP13.55□□□□□ -0.24
EIF3C-208ENST00000566086 ZNF408Q9H9D4 720 aa13.55□□□□□ -0.24
EIF3C-208ENST00000566086 ADARB2Q9NS39 739 aaKnown RBP13.55□□□□□ -0.24
EIF3C-208ENST00000566086 DUOX1Q9NRD9 1551 aa13.54□□□□□ -0.24
EIF3C-208ENST00000566086 COL4A1P02462 1669 aa13.54□□□□□ -0.24
EIF3C-208ENST00000566086 LRRC37AA6NMS7 1700 aa13.54□□□□□ -0.24
EIF3C-208ENST00000566086 SLC34A2O95436 690 aa13.54□□□□□ -0.24
EIF3C-208ENST00000566086 PROSER3Q2NL68 480 aa13.54□□□□□ -0.24
EIF3C-208ENST00000566086 SAPCD2Q86UD0 394 aa13.54□□□□□ -0.24
EIF3C-208ENST00000566086 ATP6V0A2Q9Y487 856 aa13.54□□□□□ -0.24
EIF3C-208ENST00000566086 RAD17O75943 681 aa13.53□□□□□ -0.24
EIF3C-208ENST00000566086 HIRAP54198 1017 aaPredicted RBP13.53□□□□□ -0.24
EIF3C-208ENST00000566086 LRP10Q7Z4F1 713 aa13.53□□□□□ -0.24
EIF3C-208ENST00000566086 TRPM4Q8TD43 1214 aa13.53□□□□□ -0.24
EIF3C-208ENST00000566086 PNISRQ8TF01 805 aaKnown RBP13.53□□□□□ -0.24
EIF3C-208ENST00000566086 CFAP44Q96MT7 982 aa13.53□□□□□ -0.24
EIF3C-208ENST00000566086 NLRP3Q96P20 1036 aa13.53□□□□□ -0.24
EIF3C-208ENST00000566086 PLEKHF1Q96S99 279 aa13.53□□□□□ -0.24
EIF3C-208ENST00000566086 ZNRF3Q9ULT6 936 aa13.53□□□□□ -0.24
EIF3C-208ENST00000566086 HCLS1P14317 486 aaPredicted RBP13.52□□□□□ -0.25
EIF3C-208ENST00000566086 EIF2S2P20042 333 aaKnown RBP13.52□□□□□ -0.25
EIF3C-208ENST00000566086 MLLT1Q03111 559 aaPredicted RBP13.52□□□□□ -0.25
EIF3C-208ENST00000566086 PDIA6Q15084 440 aa13.52□□□□□ -0.25
EIF3C-208ENST00000566086 NFE2L2Q16236 605 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms