RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 GTF2E1P29083 439 aaPredicted RBP26.92■■□□□ 1.9
SHCBP1-205ENST00000566016 FKBP5Q13451 457 aaPredicted RBP26.92■■□□□ 1.9
SHCBP1-205ENST00000566016 UTP14AQ9BVJ6 771 aaKnown RBP26.92■■□□□ 1.9
SHCBP1-205ENST00000566016 KLRG2A4D1S0 409 aaPredicted RBP26.91■■□□□ 1.9
SHCBP1-205ENST00000566016 FAM177BA6PVY3 158 aa26.91■■□□□ 1.9
SHCBP1-205ENST00000566016 SSH1Q8WYL5 1049 aa26.9■■□□□ 1.9
SHCBP1-205ENST00000566016 H0YIN7 160 aa26.89■■□□□ 1.9
SHCBP1-205ENST00000566016 CHRNA5P30532 468 aa26.89■■□□□ 1.9
SHCBP1-205ENST00000566016 NUTM1Q86Y26 1132 aa26.89■■□□□ 1.9
SHCBP1-205ENST00000566016 DDX60Q8IY21 1712 aaKnown RBP26.89■■□□□ 1.9
SHCBP1-205ENST00000566016 CCDC24Q8N4L8 307 aa26.89■■□□□ 1.9
SHCBP1-205ENST00000566016 CCDC191Q8NCU4 936 aa26.89■■□□□ 1.9
SHCBP1-205ENST00000566016 ATP5J2-PTCD1G3V325 749 aa26.88■■□□□ 1.89
SHCBP1-205ENST00000566016 ERFEQ4G0M1 354 aa26.88■■□□□ 1.89
SHCBP1-205ENST00000566016 C2CD5Q86YS7 1000 aa26.88■■□□□ 1.89
SHCBP1-205ENST00000566016 MRPL50Q8N5N7 158 aaKnown RBP26.88■■□□□ 1.89
SHCBP1-205ENST00000566016 PIM2Q9P1W9 311 aa26.88■■□□□ 1.89
SHCBP1-205ENST00000566016 SH3TC1Q8TE82 1336 aa26.88■■□□□ 1.89
SHCBP1-205ENST00000566016 NEXNQ0ZGT2 675 aa26.87■■□□□ 1.89
SHCBP1-205ENST00000566016 MYD88Q99836 296 aa26.87■■□□□ 1.89
SHCBP1-205ENST00000566016 BRPF1P55201 1214 aaPredicted RBP26.87■■□□□ 1.89
SHCBP1-205ENST00000566016 GPR162Q16538 588 aa26.87■■□□□ 1.89
SHCBP1-205ENST00000566016 SLC10A5Q5PT55 438 aa26.87■■□□□ 1.89
SHCBP1-205ENST00000566016 DNAAF4Q8WXU2 420 aa26.87■■□□□ 1.89
SHCBP1-205ENST00000566016 TRMT112Q9UI30 125 aaKnown RBP26.87■■□□□ 1.89
SHCBP1-205ENST00000566016 CHD4Q14839 1912 aa26.86■■□□□ 1.89
SHCBP1-205ENST00000566016 CACNA1SQ13698 1873 aa26.86■■□□□ 1.89
SHCBP1-205ENST00000566016 PTPRCP08575 1304 aa26.86■■□□□ 1.89
SHCBP1-205ENST00000566016 SRGNP10124 158 aa26.86■■□□□ 1.89
SHCBP1-205ENST00000566016 YBX3P16989 372 aaKnown RBP eCLIP26.86■■□□□ 1.89
SHCBP1-205ENST00000566016 CRY2Q49AN0 593 aa26.86■■□□□ 1.89
SHCBP1-205ENST00000566016 IGKV5-2P06315 115 aa26.84■■□□□ 1.89
SHCBP1-205ENST00000566016 STYK1Q6J9G0 422 aa26.84■■□□□ 1.89
SHCBP1-205ENST00000566016 SMC4Q9NTJ3 1288 aa26.84■■□□□ 1.89
SHCBP1-205ENST00000566016 CWC25Q9NXE8 425 aaPredicted RBP26.84■■□□□ 1.89
SHCBP1-205ENST00000566016 GRIN3BO60391 1043 aa26.83■■□□□ 1.89
SHCBP1-205ENST00000566016 MASTLQ96GX5 879 aa26.83■■□□□ 1.89
SHCBP1-205ENST00000566016 MYH3P11055 1940 aa26.82■■□□□ 1.88
SHCBP1-205ENST00000566016 RARSP54136 660 aaKnown RBP26.82■■□□□ 1.88
SHCBP1-205ENST00000566016 DALRD3Q5D0E6 543 aaKnown RBP26.82■■□□□ 1.88
SHCBP1-205ENST00000566016 ZBTB38Q8NAP3 1195 aaPredicted RBP26.82■■□□□ 1.88
SHCBP1-205ENST00000566016 LINS1Q8NG48 757 aa26.82■■□□□ 1.88
SHCBP1-205ENST00000566016 NEURL1BA8MQ27 555 aa26.81■■□□□ 1.88
SHCBP1-205ENST00000566016 NPR1P16066 1061 aa26.81■■□□□ 1.88
SHCBP1-205ENST00000566016 PELP1Q8IZL8 1130 aaKnown RBP26.81■■□□□ 1.88
SHCBP1-205ENST00000566016 TTLL6Q8N841 843 aa26.81■■□□□ 1.88
SHCBP1-205ENST00000566016 BCL2L13Q9BXK5 485 aa26.81■■□□□ 1.88
SHCBP1-205ENST00000566016 SLX4Q8IY92 1834 aa26.81■■□□□ 1.88
SHCBP1-205ENST00000566016 PCCAP05165 728 aaPredicted RBP26.81■■□□□ 1.88
SHCBP1-205ENST00000566016 BCS1LQ9Y276 419 aa26.81■■□□□ 1.88
SHCBP1-205ENST00000566016 CNKSR1Q969H4 720 aa26.8■■□□□ 1.88
SHCBP1-205ENST00000566016 FAM89AQ96GI7 184 aa26.8■■□□□ 1.88
SHCBP1-205ENST00000566016 NLRP3Q96P20 1036 aa26.8■■□□□ 1.88
SHCBP1-205ENST00000566016 F6X3S4 739 aa26.79■■□□□ 1.88
SHCBP1-205ENST00000566016 HSP90B1P14625 803 aaKnown RBP26.79■■□□□ 1.88
SHCBP1-205ENST00000566016 CWF19L2Q2TBE0 894 aaKnown RBP26.79■■□□□ 1.88
SHCBP1-205ENST00000566016 KIF16BQ96L93 1317 aa26.78■■□□□ 1.88
SHCBP1-205ENST00000566016 HOXA10P31260 410 aaPredicted RBP26.78■■□□□ 1.88
SHCBP1-205ENST00000566016 SYNE4Q8N205 404 aa26.78■■□□□ 1.88
SHCBP1-205ENST00000566016 ZNF622Q969S3 477 aaKnown RBP eCLIP26.78■■□□□ 1.88
SHCBP1-205ENST00000566016 WWC3Q9ULE0 1092 aa26.78■■□□□ 1.88
SHCBP1-205ENST00000566016 BEND3Q5T5X7 828 aa26.77■■□□□ 1.88
SHCBP1-205ENST00000566016 CDHR2Q9BYE9 1310 aa26.77■■□□□ 1.88
SHCBP1-205ENST00000566016 HCLS1P14317 486 aaPredicted RBP26.76■■□□□ 1.87
SHCBP1-205ENST00000566016 GCKRQ14397 625 aa26.76■■□□□ 1.87
SHCBP1-205ENST00000566016 IRS4O14654 1257 aaPredicted RBP26.75■■□□□ 1.87
SHCBP1-205ENST00000566016 C3orf67Q6ZVT6 689 aa26.75■■□□□ 1.87
SHCBP1-205ENST00000566016 RPGRQ92834 1020 aaKnown RBP26.75■■□□□ 1.87
SHCBP1-205ENST00000566016 ALDH1B1P30837 517 aa26.74■■□□□ 1.87
SHCBP1-205ENST00000566016 FER1L6Q2WGJ9 1857 aa26.74■■□□□ 1.87
SHCBP1-205ENST00000566016 ALDH1L1O75891 902 aa26.74■■□□□ 1.87
SHCBP1-205ENST00000566016 PRPF40BQ6NWY9 871 aaKnown RBP26.74■■□□□ 1.87
SHCBP1-205ENST00000566016 ARHGAP45Q92619 1136 aa26.73■■□□□ 1.87
SHCBP1-205ENST00000566016 CRAMP1Q96RY5 1269 aa26.73■■□□□ 1.87
SHCBP1-205ENST00000566016 H7C1W4 665 aa26.72■■□□□ 1.87
SHCBP1-205ENST00000566016 SF3B3Q15393 1217 aaKnown RBP26.72■■□□□ 1.87
SHCBP1-205ENST00000566016 RTL5Q5HYW3 569 aaPredicted RBP26.72■■□□□ 1.87
SHCBP1-205ENST00000566016 SLC4A10Q6U841 1118 aa26.71■■□□□ 1.87
SHCBP1-205ENST00000566016 RBM17Q96I25 401 aaKnown RBP26.71■■□□□ 1.87
SHCBP1-205ENST00000566016 SRCIN1Q9C0H9 1055 aa26.71■■□□□ 1.87
SHCBP1-205ENST00000566016 NOB1Q9ULX3 412 aaKnown RBP26.71■■□□□ 1.87
SHCBP1-205ENST00000566016 UBE3BQ7Z3V4 1068 aa26.7■■□□□ 1.87
SHCBP1-205ENST00000566016 API5Q9BZZ5 524 aaKnown RBP26.7■■□□□ 1.87
SHCBP1-205ENST00000566016 SBF1O95248 1867 aa26.7■■□□□ 1.86
SHCBP1-205ENST00000566016 TAF1P21675 1872 aa26.7■■□□□ 1.86
SHCBP1-205ENST00000566016 PDE8AO60658 829 aa26.69■■□□□ 1.86
SHCBP1-205ENST00000566016 SOGA3Q5TF21 947 aa26.69■■□□□ 1.86
SHCBP1-205ENST00000566016 CASP7P55210 303 aa26.68■■□□□ 1.86
SHCBP1-205ENST00000566016 C7orf43Q8WVR3 580 aa26.68■■□□□ 1.86
SHCBP1-205ENST00000566016 IPO8O15397 1037 aaKnown RBP26.68■■□□□ 1.86
SHCBP1-205ENST00000566016 PLA2G12BQ9BX93 195 aa26.68■■□□□ 1.86
SHCBP1-205ENST00000566016 LRRC37AA6NMS7 1700 aa26.67■■□□□ 1.86
SHCBP1-205ENST00000566016 ABCC4O15439 1325 aa26.67■■□□□ 1.86
SHCBP1-205ENST00000566016 GRM8O00222 908 aa26.67■■□□□ 1.86
SHCBP1-205ENST00000566016 BCAR3O75815 825 aa26.67■■□□□ 1.86
SHCBP1-205ENST00000566016 DDX46Q7L014 1031 aaKnown RBP26.66■■□□□ 1.86
SHCBP1-205ENST00000566016 C21orf2O43822 256 aa26.65■■□□□ 1.86
SHCBP1-205ENST00000566016 JARID2Q92833 1246 aaPredicted RBP26.65■■□□□ 1.86
SHCBP1-205ENST00000566016 SNED1Q8TER0 1413 aa26.64■■□□□ 1.86
SHCBP1-205ENST00000566016 RTL9Q8NET4 1388 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms