RNA–Protein interactions for RNA: ENST00000565738.1

KARS-205, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-205ENST00000565738 INPP5BP32019 993 aa10.67□□□□□ -0.7
KARS-205ENST00000565738 MAPK8P45983 427 aa10.67□□□□□ -0.7
KARS-205ENST00000565738 NLRP8Q86W28 1048 aa10.67□□□□□ -0.7
KARS-205ENST00000565738 NIF3L1Q9GZT8 377 aa10.67□□□□□ -0.7
KARS-205ENST00000565738 GGNBP2Q9H3C7 697 aa10.67□□□□□ -0.7
KARS-205ENST00000565738 RTCBQ9Y3I0 505 aaKnown RBP10.67□□□□□ -0.7
KARS-205ENST00000565738 TREHO43280 583 aa10.66□□□□□ -0.7
KARS-205ENST00000565738 PLCB3Q01970 1234 aa10.66□□□□□ -0.7
KARS-205ENST00000565738 EAPPQ56P03 285 aaPredicted RBP10.66□□□□□ -0.7
KARS-205ENST00000565738 CCDC155Q8N6L0 562 aa10.66□□□□□ -0.7
KARS-205ENST00000565738 NUCKS1Q9H1E3 243 aaKnown RBP10.66□□□□□ -0.7
KARS-205ENST00000565738 BRD7Q9NPI1 651 aa10.66□□□□□ -0.7
KARS-205ENST00000565738 RBM47A0AV96 593 aaKnown RBP10.65□□□□□ -0.7
KARS-205ENST00000565738 SNRPBP14678 240 aaKnown RBP10.65□□□□□ -0.7
KARS-205ENST00000565738 EPB42P16452 691 aa10.65□□□□□ -0.7
KARS-205ENST00000565738 TAGLNQ01995 201 aaKnown RBP10.65□□□□□ -0.7
KARS-205ENST00000565738 EHHADHQ08426 723 aa10.65□□□□□ -0.7
KARS-205ENST00000565738 ZCCHC2Q9C0B9 1178 aaKnown RBP10.65□□□□□ -0.7
KARS-205ENST00000565738 DCDC2BA2VCK2 349 aa10.64□□□□□ -0.71
KARS-205ENST00000565738 UBAP1LF5GYI3 381 aa10.64□□□□□ -0.71
KARS-205ENST00000565738 ATXN7O15265 892 aaPredicted RBP10.64□□□□□ -0.71
KARS-205ENST00000565738 RPLP1P05386 114 aaKnown RBP10.64□□□□□ -0.71
KARS-205ENST00000565738 ZNF16P17020 682 aaPredicted RBP10.64□□□□□ -0.71
KARS-205ENST00000565738 CUEDC1Q9NWM3 386 aaPredicted RBP10.64□□□□□ -0.71
KARS-205ENST00000565738 KHNYNO15037 678 aaKnown RBP10.63□□□□□ -0.71
KARS-205ENST00000565738 IGHA2P01877 340 aa10.63□□□□□ -0.71
KARS-205ENST00000565738 THBS1P07996 1170 aa10.63□□□□□ -0.71
KARS-205ENST00000565738 TRIP4Q15650 581 aaPredicted RBP10.63□□□□□ -0.71
KARS-205ENST00000565738 ZNF326Q5BKZ1 582 aaKnown RBP10.63□□□□□ -0.71
KARS-205ENST00000565738 SAMD5Q5TGI4 173 aa10.63□□□□□ -0.71
KARS-205ENST00000565738 FIGNL1Q6PIW4 674 aa10.63□□□□□ -0.71
KARS-205ENST00000565738 FBXO33Q7Z6M2 555 aa10.63□□□□□ -0.71
KARS-205ENST00000565738 FNDC3AQ9Y2H6 1198 aaKnown RBP10.63□□□□□ -0.71
KARS-205ENST00000565738 C11orf95C9JLR9 678 aaPredicted RBP10.62□□□□□ -0.71
KARS-205ENST00000565738 H7C1W4 665 aa10.62□□□□□ -0.71
KARS-205ENST00000565738 FMR1Q06787 632 aaKnown RBP eCLIP10.62□□□□□ -0.71
KARS-205ENST00000565738 DSC3Q14574 896 aa10.62□□□□□ -0.71
KARS-205ENST00000565738 LBRQ14739 615 aaKnown RBP10.62□□□□□ -0.71
KARS-205ENST00000565738 DBN1Q16643 649 aa10.62□□□□□ -0.71
KARS-205ENST00000565738 KCNMB2Q9Y691 235 aa10.62□□□□□ -0.71
KARS-205ENST00000565738 UNCXA6NJT0 531 aa10.61□□□□□ -0.71
KARS-205ENST00000565738 GRNP28799 593 aaKnown RBP10.61□□□□□ -0.71
KARS-205ENST00000565738 COL19A1Q14993 1142 aa10.61□□□□□ -0.71
KARS-205ENST00000565738 ZNF438Q7Z4V0 828 aa10.61□□□□□ -0.71
KARS-205ENST00000565738 ALKBH8Q96BT7 664 aaKnown RBP10.61□□□□□ -0.71
KARS-205ENST00000565738 PCDHGC4Q9Y5F7 938 aa10.61□□□□□ -0.71
KARS-205ENST00000565738 XYLBO75191 536 aa10.6□□□□□ -0.71
KARS-205ENST00000565738 ITGA6P23229 1130 aa10.6□□□□□ -0.71
KARS-205ENST00000565738 SFSWAPQ12872 951 aaKnown RBP10.6□□□□□ -0.71
KARS-205ENST00000565738 ORC1Q13415 861 aa10.6□□□□□ -0.71
KARS-205ENST00000565738 TRIM22Q8IYM9 498 aa10.6□□□□□ -0.71
KARS-205ENST00000565738 KCNH4Q9UQ05 1017 aa10.6□□□□□ -0.71
KARS-205ENST00000565738 PNMA6FA0A0J9YX94 578 aa10.59□□□□□ -0.71
KARS-205ENST00000565738 E9PSI1 815 aa10.59□□□□□ -0.71
KARS-205ENST00000565738 LDHBP07195 334 aaKnown RBP10.59□□□□□ -0.71
KARS-205ENST00000565738 FAM157BP0CG42 384 aa10.59□□□□□ -0.71
KARS-205ENST00000565738 GTPBP3Q969Y2 492 aaKnown RBP10.59□□□□□ -0.71
KARS-205ENST00000565738 CDC14CA4D256 554 aa10.58□□□□□ -0.72
KARS-205ENST00000565738 LCE2BO14633 110 aa10.58□□□□□ -0.72
KARS-205ENST00000565738 ATP2B2Q01814 1243 aa10.58□□□□□ -0.72
KARS-205ENST00000565738 KRT25Q7Z3Z0 450 aa10.58□□□□□ -0.72
KARS-205ENST00000565738 ZNF837Q96EG3 531 aaPredicted RBP10.58□□□□□ -0.72
KARS-205ENST00000565738 ABHD17AQ96GS6 310 aa10.58□□□□□ -0.72
KARS-205ENST00000565738 SETDB2Q96T68 719 aa10.58□□□□□ -0.72
KARS-205ENST00000565738 FOXD3Q9UJU5 478 aaPredicted RBP10.58□□□□□ -0.72
KARS-205ENST00000565738 WWC3Q9ULE0 1092 aa10.58□□□□□ -0.72
KARS-205ENST00000565738 MAPTP10636 758 aaKnown RBP10.57□□□□□ -0.72
KARS-205ENST00000565738 MRRFQ96E11 262 aaKnown RBP10.57□□□□□ -0.72
KARS-205ENST00000565738 CSRNP1Q96S65 589 aa10.57□□□□□ -0.72
KARS-205ENST00000565738 BNIP3LO60238 219 aa10.56□□□□□ -0.72
KARS-205ENST00000565738 NEFLP07196 543 aa10.56□□□□□ -0.72
KARS-205ENST00000565738 TNP2Q05952 138 aa10.56□□□□□ -0.72
KARS-205ENST00000565738 UBAP2LQ14157 1087 aaKnown RBP10.56□□□□□ -0.72
KARS-205ENST00000565738 PDE12Q6L8Q7 609 aaKnown RBP10.56□□□□□ -0.72
KARS-205ENST00000565738 ELP3Q9H9T3 547 aa10.56□□□□□ -0.72
KARS-205ENST00000565738 STRN4Q9NRL3 753 aa10.56□□□□□ -0.72
KARS-205ENST00000565738 TMEM63CQ9P1W3 806 aa10.56□□□□□ -0.72
KARS-205ENST00000565738 EIF1AYO14602 144 aaKnown RBP10.55□□□□□ -0.72
KARS-205ENST00000565738 EFSO43281 561 aa10.55□□□□□ -0.72
KARS-205ENST00000565738 TNFRSF21O75509 655 aa10.55□□□□□ -0.72
KARS-205ENST00000565738 GRIN2CQ14957 1233 aa10.55□□□□□ -0.72
KARS-205ENST00000565738 ENOX2Q16206 610 aaKnown RBP10.55□□□□□ -0.72
KARS-205ENST00000565738 POTECB2RU33 542 aa10.54□□□□□ -0.72
KARS-205ENST00000565738 GPR25O00155 361 aa10.54□□□□□ -0.72
KARS-205ENST00000565738 PPFIA3O75145 1194 aa10.54□□□□□ -0.72
KARS-205ENST00000565738 PHACTR2O75167 634 aa10.54□□□□□ -0.72
KARS-205ENST00000565738 SASH3O75995 380 aa10.54□□□□□ -0.72
KARS-205ENST00000565738 CD33P20138 364 aa10.54□□□□□ -0.72
KARS-205ENST00000565738 SNX29Q8TEQ0 813 aa10.54□□□□□ -0.72
KARS-205ENST00000565738 MARK1Q9P0L2 795 aa10.54□□□□□ -0.72
KARS-205ENST00000565738 CPNE3O75131 537 aaKnown RBP10.53□□□□□ -0.72
KARS-205ENST00000565738 PRPF40AO75400 957 aaKnown RBP10.53□□□□□ -0.72
KARS-205ENST00000565738 KCNQ4P56696 695 aa10.53□□□□□ -0.72
KARS-205ENST00000565738 CCINQ13939 588 aa10.53□□□□□ -0.72
KARS-205ENST00000565738 XKR5Q6UX68 686 aa10.53□□□□□ -0.72
KARS-205ENST00000565738 NLRP13Q86W25 1043 aa10.53□□□□□ -0.72
KARS-205ENST00000565738 VWA5B2Q8N398 1253 aa10.53□□□□□ -0.72
KARS-205ENST00000565738 GMCL1Q96IK5 515 aa10.53□□□□□ -0.72
KARS-205ENST00000565738 PNMA5Q96PV4 448 aa10.53□□□□□ -0.72
KARS-205ENST00000565738 DUSP9Q99956 384 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms