RNA–Protein interactions for RNA: ENST00000565626.1

NSMCE1-210, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 259 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-210ENST00000565626 SOGA3Q5TF21 947 aa14.23□□□□□ -0.13
NSMCE1-210ENST00000565626 PPP1R42Q7Z4L9 355 aa14.23□□□□□ -0.13
NSMCE1-210ENST00000565626 NLRP10Q86W26 655 aa14.23□□□□□ -0.13
NSMCE1-210ENST00000565626 C16orf71Q8IYS4 520 aaPredicted RBP14.23□□□□□ -0.13
NSMCE1-210ENST00000565626 ZNF277Q9NRM2 450 aaPredicted RBP14.23□□□□□ -0.13
NSMCE1-210ENST00000565626 POTECB2RU33 542 aa14.22□□□□□ -0.13
NSMCE1-210ENST00000565626 TCERG1O14776 1098 aaKnown RBP14.22□□□□□ -0.13
NSMCE1-210ENST00000565626 HCLS1P14317 486 aaPredicted RBP14.22□□□□□ -0.13
NSMCE1-210ENST00000565626 ALDH1B1P30837 517 aa14.22□□□□□ -0.13
NSMCE1-210ENST00000565626 HOXA10P31260 410 aaPredicted RBP14.22□□□□□ -0.13
NSMCE1-210ENST00000565626 GNAI1P63096 354 aa14.22□□□□□ -0.13
NSMCE1-210ENST00000565626 TCIRG1Q13488 830 aa14.22□□□□□ -0.13
NSMCE1-210ENST00000565626 C8orf58Q8NAV2 365 aa14.22□□□□□ -0.13
NSMCE1-210ENST00000565626 RBM46Q8TBY0 533 aaKnown RBP14.22□□□□□ -0.13
NSMCE1-210ENST00000565626 RPGRQ92834 1020 aaKnown RBP14.22□□□□□ -0.13
NSMCE1-210ENST00000565626 MRS2Q9HD23 443 aa14.22□□□□□ -0.13
NSMCE1-210ENST00000565626 ARFGEF2Q9Y6D5 1785 aa14.22□□□□□ -0.13
NSMCE1-210ENST00000565626 TIAM2Q8IVF5 1701 aa14.21□□□□□ -0.13
NSMCE1-210ENST00000565626 ANP32CO43423 234 aa14.21□□□□□ -0.13
NSMCE1-210ENST00000565626 FKBP4Q02790 459 aaKnown RBP eCLIP14.21□□□□□ -0.13
NSMCE1-210ENST00000565626 HSP90AB3PQ58FF7 597 aa14.21□□□□□ -0.13
NSMCE1-210ENST00000565626 SLC10A5Q5PT55 438 aa14.21□□□□□ -0.13
NSMCE1-210ENST00000565626 DBF4Q9UBU7 674 aaPredicted RBP14.21□□□□□ -0.13
NSMCE1-210ENST00000565626 RIC1Q4ADV7 1423 aa14.21□□□□□ -0.13
NSMCE1-210ENST00000565626 ATP5J2-PTCD1G3V325 749 aa14.2□□□□□ -0.14
NSMCE1-210ENST00000565626 DDNO94850 711 aaPredicted RBP14.2□□□□□ -0.14
NSMCE1-210ENST00000565626 VEGFAP15692 232 aaPredicted RBP14.2□□□□□ -0.14
NSMCE1-210ENST00000565626 CALD1Q05682 793 aaKnown RBP14.2□□□□□ -0.14
NSMCE1-210ENST00000565626 DPY19L2Q6NUT2 758 aa14.2□□□□□ -0.14
NSMCE1-210ENST00000565626 ANKRD13DQ6ZTN6 518 aa14.2□□□□□ -0.14
NSMCE1-210ENST00000565626 PLBD2Q8NHP8 589 aa14.2□□□□□ -0.14
NSMCE1-210ENST00000565626 TSR2Q969E8 191 aaKnown RBP14.2□□□□□ -0.14
NSMCE1-210ENST00000565626 NLRP3Q96P20 1036 aa14.2□□□□□ -0.14
NSMCE1-210ENST00000565626 TRMT112Q9UI30 125 aaKnown RBP14.2□□□□□ -0.14
NSMCE1-210ENST00000565626 SNED1Q8TER0 1413 aa14.2□□□□□ -0.14
NSMCE1-210ENST00000565626 HTRA3P83110 453 aa14.19□□□□□ -0.14
NSMCE1-210ENST00000565626 RTKN2Q8IZC4 609 aa14.19□□□□□ -0.14
NSMCE1-210ENST00000565626 TSPYL6Q8N831 410 aa14.19□□□□□ -0.14
NSMCE1-210ENST00000565626 RBM17Q96I25 401 aaKnown RBP14.19□□□□□ -0.14
NSMCE1-210ENST00000565626 CRAMP1Q96RY5 1269 aa14.19□□□□□ -0.14
NSMCE1-210ENST00000565626 PHAXQ9H814 394 aaKnown RBP14.19□□□□□ -0.14
NSMCE1-210ENST00000565626 HYPKQ9NX55 129 aa14.19□□□□□ -0.14
NSMCE1-210ENST00000565626 ZNF541Q9H0D2 1346 aa14.18□□□□□ -0.14
NSMCE1-210ENST00000565626 PPEF1O14829 653 aaPredicted RBP14.18□□□□□ -0.14
NSMCE1-210ENST00000565626 WWC1Q8IX03 1113 aa14.18□□□□□ -0.14
NSMCE1-210ENST00000565626 ISCA1Q9BUE6 129 aa14.18□□□□□ -0.14
NSMCE1-210ENST00000565626 SALL2Q9Y467 1007 aaPredicted RBP14.18□□□□□ -0.14
NSMCE1-210ENST00000565626 PCNTO95613 3336 aa14.18□□□□□ -0.14
NSMCE1-210ENST00000565626 ABCC4O15439 1325 aa14.17□□□□□ -0.14
NSMCE1-210ENST00000565626 SH3TC1Q8TE82 1336 aa14.17□□□□□ -0.14
NSMCE1-210ENST00000565626 IARSP41252 1262 aaKnown RBP14.17□□□□□ -0.14
NSMCE1-210ENST00000565626 APLP1P51693 650 aa14.17□□□□□ -0.14
NSMCE1-210ENST00000565626 FSTL1Q12841 308 aa14.17□□□□□ -0.14
NSMCE1-210ENST00000565626 RTL5Q5HYW3 569 aaPredicted RBP14.17□□□□□ -0.14
NSMCE1-210ENST00000565626 DICER1Q9UPY3 1922 aaKnown RBP14.17□□□□□ -0.14
NSMCE1-210ENST00000565626 POTEIP0CG38 1075 aa14.16□□□□□ -0.14
NSMCE1-210ENST00000565626 POTEJP0CG39 1038 aa14.16□□□□□ -0.14
NSMCE1-210ENST00000565626 SMC1BQ8NDV3 1235 aa14.16□□□□□ -0.14
NSMCE1-210ENST00000565626 FAM89AQ96GI7 184 aa14.16□□□□□ -0.14
NSMCE1-210ENST00000565626 PSMD1Q99460 953 aa14.16□□□□□ -0.14
NSMCE1-210ENST00000565626 RNF123Q5XPI4 1314 aa14.15□□□□□ -0.14
NSMCE1-210ENST00000565626 ANKRD36CQ5JPF3 1778 aa14.15□□□□□ -0.14
NSMCE1-210ENST00000565626 COL4A5P29400 1685 aa14.15□□□□□ -0.14
NSMCE1-210ENST00000565626 CCDC27Q2M243 656 aa14.15□□□□□ -0.14
NSMCE1-210ENST00000565626 CC2D2BQ6DHV5 1058 aa14.15□□□□□ -0.14
NSMCE1-210ENST00000565626 RIC3Q7Z5B4 369 aa14.15□□□□□ -0.14
NSMCE1-210ENST00000565626 WDR90Q96KV7 1748 aa14.15□□□□□ -0.14
NSMCE1-210ENST00000565626 FZD9O00144 591 aa14.14□□□□□ -0.15
NSMCE1-210ENST00000565626 GOLGA2Q08379 1002 aa14.14□□□□□ -0.15
NSMCE1-210ENST00000565626 DNAJC5GQ8N7S2 189 aa14.14□□□□□ -0.15
NSMCE1-210ENST00000565626 ATP6V0A2Q9Y487 856 aa14.14□□□□□ -0.15
NSMCE1-210ENST00000565626 TRIM28Q13263 835 aaKnown RBP14.13□□□□□ -0.15
NSMCE1-210ENST00000565626 CCDC30Q5VVM6 783 aa14.13□□□□□ -0.15
NSMCE1-210ENST00000565626 DDX46Q7L014 1031 aaKnown RBP14.13□□□□□ -0.15
NSMCE1-210ENST00000565626 JARID2Q92833 1246 aaPredicted RBP14.13□□□□□ -0.15
NSMCE1-210ENST00000565626 MYD88Q99836 296 aa14.13□□□□□ -0.15
NSMCE1-210ENST00000565626 FAM9BQ8IZU0 186 aa14.12□□□□□ -0.15
NSMCE1-210ENST00000565626 LARGE2Q8N3Y3 721 aa14.12□□□□□ -0.15
NSMCE1-210ENST00000565626 JDP2Q8WYK2 163 aa14.12□□□□□ -0.15
NSMCE1-210ENST00000565626 L3MBTL3Q96JM7 780 aaPredicted RBP14.12□□□□□ -0.15
NSMCE1-210ENST00000565626 LAMB2P55268 1798 aa14.11□□□□□ -0.15
NSMCE1-210ENST00000565626 IRS4O14654 1257 aaPredicted RBP14.11□□□□□ -0.15
NSMCE1-210ENST00000565626 BBOX1O75936 387 aa14.11□□□□□ -0.15
NSMCE1-210ENST00000565626 GRAPQ13588 217 aa14.11□□□□□ -0.15
NSMCE1-210ENST00000565626 AOC3Q16853 763 aa14.11□□□□□ -0.15
NSMCE1-210ENST00000565626 TWISTNBQ3B726 338 aaPredicted RBP14.11□□□□□ -0.15
NSMCE1-210ENST00000565626 G2E3Q7L622 706 aa14.11□□□□□ -0.15
NSMCE1-210ENST00000565626 GRAPLQ8TC17 118 aaPredicted RBP14.11□□□□□ -0.15
NSMCE1-210ENST00000565626 CELF1Q92879 486 aaKnown RBP14.11□□□□□ -0.15
NSMCE1-210ENST00000565626 TAF1DQ9H5J8 278 aaPredicted RBP14.11□□□□□ -0.15
NSMCE1-210ENST00000565626 FANCIQ9NVI1 1328 aa14.11□□□□□ -0.15
NSMCE1-210ENST00000565626 COL4A1P02462 1669 aa14.1□□□□□ -0.15
NSMCE1-210ENST00000565626 PPIP5K2O43314 1243 aa14.1□□□□□ -0.15
NSMCE1-210ENST00000565626 SF3B3Q15393 1217 aaKnown RBP14.1□□□□□ -0.15
NSMCE1-210ENST00000565626 SP8Q8IXZ3 490 aa14.1□□□□□ -0.15
NSMCE1-210ENST00000565626 TMX4Q9H1E5 349 aaPredicted RBP14.1□□□□□ -0.15
NSMCE1-210ENST00000565626 SPINK5Q9NQ38 1064 aaPredicted RBP14.1□□□□□ -0.15
NSMCE1-210ENST00000565626 MAP3K2Q9Y2U5 619 aa14.1□□□□□ -0.15
NSMCE1-210ENST00000565626 GJA3Q9Y6H8 435 aa14.1□□□□□ -0.15
NSMCE1-210ENST00000565626 IL16Q14005 1332 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms