RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 POTECB2RU33 542 aa13.07□□□□□ -0.32
CMTM3-209ENST00000565003 ALDH1B1P30837 517 aa13.07□□□□□ -0.32
CMTM3-209ENST00000565003 PPP1R42Q7Z4L9 355 aa13.07□□□□□ -0.32
CMTM3-209ENST00000565003 SLC51AQ86UW1 340 aa13.07□□□□□ -0.32
CMTM3-209ENST00000565003 CEP350Q5VT06 3117 aa13.07□□□□□ -0.32
CMTM3-209ENST00000565003 WDR90Q96KV7 1748 aa13.07□□□□□ -0.32
CMTM3-209ENST00000565003 VEGFAP15692 232 aaPredicted RBP13.06□□□□□ -0.32
CMTM3-209ENST00000565003 FKBP4Q02790 459 aaKnown RBP eCLIP13.06□□□□□ -0.32
CMTM3-209ENST00000565003 DUSP27Q5VZP5 1158 aa13.06□□□□□ -0.32
CMTM3-209ENST00000565003 RPGRQ92834 1020 aaKnown RBP13.06□□□□□ -0.32
CMTM3-209ENST00000565003 UTP14AQ9BVJ6 771 aaKnown RBP13.06□□□□□ -0.32
CMTM3-209ENST00000565003 ZNF277Q9NRM2 450 aaPredicted RBP13.06□□□□□ -0.32
CMTM3-209ENST00000565003 IFT57Q9NWB7 429 aa13.06□□□□□ -0.32
CMTM3-209ENST00000565003 ZNF316A6NFI3 1004 aaPredicted RBP13.05□□□□□ -0.32
CMTM3-209ENST00000565003 HOXA10P31260 410 aaPredicted RBP13.05□□□□□ -0.32
CMTM3-209ENST00000565003 APLP1P51693 650 aa13.05□□□□□ -0.32
CMTM3-209ENST00000565003 FSTL1Q12841 308 aa13.05□□□□□ -0.32
CMTM3-209ENST00000565003 DPY19L2Q6NUT2 758 aa13.05□□□□□ -0.32
CMTM3-209ENST00000565003 NLRP10Q86W26 655 aa13.05□□□□□ -0.32
CMTM3-209ENST00000565003 DDNO94850 711 aaPredicted RBP13.04□□□□□ -0.32
CMTM3-209ENST00000565003 GNAI1P63096 354 aa13.04□□□□□ -0.32
CMTM3-209ENST00000565003 TCIRG1Q13488 830 aa13.04□□□□□ -0.32
CMTM3-209ENST00000565003 HSP90AB3PQ58FF7 597 aa13.04□□□□□ -0.32
CMTM3-209ENST00000565003 SLC10A5Q5PT55 438 aa13.04□□□□□ -0.32
CMTM3-209ENST00000565003 RTKN2Q8IZC4 609 aa13.04□□□□□ -0.32
CMTM3-209ENST00000565003 SYNE4Q8N205 404 aa13.04□□□□□ -0.32
CMTM3-209ENST00000565003 RBM17Q96I25 401 aaKnown RBP13.04□□□□□ -0.32
CMTM3-209ENST00000565003 DBF4Q9UBU7 674 aaPredicted RBP13.04□□□□□ -0.32
CMTM3-209ENST00000565003 LAMB2P55268 1798 aa13.03□□□□□ -0.32
CMTM3-209ENST00000565003 CALD1Q05682 793 aaKnown RBP13.03□□□□□ -0.32
CMTM3-209ENST00000565003 SMC1BQ8NDV3 1235 aa13.03□□□□□ -0.32
CMTM3-209ENST00000565003 PLBD2Q8NHP8 589 aa13.03□□□□□ -0.32
CMTM3-209ENST00000565003 ZNF428Q96B54 188 aa13.03□□□□□ -0.32
CMTM3-209ENST00000565003 NLRP3Q96P20 1036 aa13.03□□□□□ -0.32
CMTM3-209ENST00000565003 CRAMP1Q96RY5 1269 aa13.03□□□□□ -0.32
CMTM3-209ENST00000565003 RNF123Q5XPI4 1314 aa13.03□□□□□ -0.32
CMTM3-209ENST00000565003 ZNF541Q9H0D2 1346 aa13.03□□□□□ -0.32
CMTM3-209ENST00000565003 COL4A5P29400 1685 aa13.02□□□□□ -0.32
CMTM3-209ENST00000565003 ELL2O00472 640 aaPredicted RBP13.02□□□□□ -0.33
CMTM3-209ENST00000565003 PPEF1O14829 653 aaPredicted RBP13.02□□□□□ -0.33
CMTM3-209ENST00000565003 HCLS1P14317 486 aaPredicted RBP13.02□□□□□ -0.33
CMTM3-209ENST00000565003 IARSP41252 1262 aaKnown RBP13.02□□□□□ -0.33
CMTM3-209ENST00000565003 HTRA3P83110 453 aa13.02□□□□□ -0.33
CMTM3-209ENST00000565003 PSMD1Q99460 953 aa13.02□□□□□ -0.33
CMTM3-209ENST00000565003 HYPKQ9NX55 129 aa13.02□□□□□ -0.33
CMTM3-209ENST00000565003 TRMT112Q9UI30 125 aaKnown RBP13.02□□□□□ -0.33
CMTM3-209ENST00000565003 TCERG1O14776 1098 aaKnown RBP13.01□□□□□ -0.33
CMTM3-209ENST00000565003 CC2D2BQ6DHV5 1058 aa13.01□□□□□ -0.33
CMTM3-209ENST00000565003 ANKRD13DQ6ZTN6 518 aa13.01□□□□□ -0.33
CMTM3-209ENST00000565003 C8orf58Q8NAV2 365 aa13.01□□□□□ -0.33
CMTM3-209ENST00000565003 MRS2Q9HD23 443 aa13.01□□□□□ -0.33
CMTM3-209ENST00000565003 ABCC4O15439 1325 aa13.01□□□□□ -0.33
CMTM3-209ENST00000565003 SH3TC1Q8TE82 1336 aa13.01□□□□□ -0.33
CMTM3-209ENST00000565003 DDX60Q8IY21 1712 aaKnown RBP13□□□□□ -0.33
CMTM3-209ENST00000565003 ATP5J2-PTCD1G3V325 749 aa13□□□□□ -0.33
CMTM3-209ENST00000565003 ANP32CO43423 234 aa13□□□□□ -0.33
CMTM3-209ENST00000565003 DNAJC5GQ8N7S2 189 aa13□□□□□ -0.33
CMTM3-209ENST00000565003 TSPYL6Q8N831 410 aa13□□□□□ -0.33
CMTM3-209ENST00000565003 TSR2Q969E8 191 aaKnown RBP13□□□□□ -0.33
CMTM3-209ENST00000565003 ISCA1Q9BUE6 129 aa13□□□□□ -0.33
CMTM3-209ENST00000565003 PHAXQ9H814 394 aaKnown RBP13□□□□□ -0.33
CMTM3-209ENST00000565003 FZD9O00144 591 aa12.99□□□□□ -0.33
CMTM3-209ENST00000565003 POTEIP0CG38 1075 aa12.99□□□□□ -0.33
CMTM3-209ENST00000565003 POTEJP0CG39 1038 aa12.99□□□□□ -0.33
CMTM3-209ENST00000565003 CCDC27Q2M243 656 aa12.99□□□□□ -0.33
CMTM3-209ENST00000565003 WWC1Q8IX03 1113 aa12.99□□□□□ -0.33
CMTM3-209ENST00000565003 L3MBTL3Q96JM7 780 aaPredicted RBP12.99□□□□□ -0.33
CMTM3-209ENST00000565003 ATP6V0A2Q9Y487 856 aa12.99□□□□□ -0.33
CMTM3-209ENST00000565003 FAM89AQ96GI7 184 aa12.98□□□□□ -0.33
CMTM3-209ENST00000565003 TAF1P21675 1872 aa12.97□□□□□ -0.33
CMTM3-209ENST00000565003 SCN4AP35499 1836 aa12.97□□□□□ -0.33
CMTM3-209ENST00000565003 COL4A1P02462 1669 aa12.97□□□□□ -0.33
CMTM3-209ENST00000565003 GOLGA2Q08379 1002 aa12.97□□□□□ -0.33
CMTM3-209ENST00000565003 GRIPAP1Q4V328 841 aa12.97□□□□□ -0.33
CMTM3-209ENST00000565003 RTL5Q5HYW3 569 aaPredicted RBP12.97□□□□□ -0.33
CMTM3-209ENST00000565003 RIC3Q7Z5B4 369 aa12.97□□□□□ -0.33
CMTM3-209ENST00000565003 JDP2Q8WYK2 163 aa12.97□□□□□ -0.33
CMTM3-209ENST00000565003 IQCA1LA6NCM1 817 aa12.96□□□□□ -0.33
CMTM3-209ENST00000565003 BBOX1O75936 387 aa12.96□□□□□ -0.33
CMTM3-209ENST00000565003 TRIM28Q13263 835 aaKnown RBP12.96□□□□□ -0.33
CMTM3-209ENST00000565003 GRAPQ13588 217 aa12.96□□□□□ -0.33
CMTM3-209ENST00000565003 AOC3Q16853 763 aa12.96□□□□□ -0.33
CMTM3-209ENST00000565003 CCDC30Q5VVM6 783 aa12.96□□□□□ -0.33
CMTM3-209ENST00000565003 DDX46Q7L014 1031 aaKnown RBP12.96□□□□□ -0.33
CMTM3-209ENST00000565003 LARGE2Q8N3Y3 721 aa12.96□□□□□ -0.33
CMTM3-209ENST00000565003 GRAPLQ8TC17 118 aaPredicted RBP12.96□□□□□ -0.33
CMTM3-209ENST00000565003 TAF1DQ9H5J8 278 aaPredicted RBP12.96□□□□□ -0.33
CMTM3-209ENST00000565003 DUOX1Q9NRD9 1551 aa12.95□□□□□ -0.34
CMTM3-209ENST00000565003 PPIP5K2O43314 1243 aa12.95□□□□□ -0.34
CMTM3-209ENST00000565003 CHADLQ6NUI6 762 aa12.95□□□□□ -0.34
CMTM3-209ENST00000565003 SP8Q8IXZ3 490 aa12.95□□□□□ -0.34
CMTM3-209ENST00000565003 GPC2Q8N158 579 aa12.95□□□□□ -0.34
CMTM3-209ENST00000565003 KLRG1Q96E93 195 aa12.95□□□□□ -0.34
CMTM3-209ENST00000565003 MYD88Q99836 296 aa12.95□□□□□ -0.34
CMTM3-209ENST00000565003 RTFDC1Q9BY42 306 aaPredicted RBP12.95□□□□□ -0.34
CMTM3-209ENST00000565003 HACL1Q9UJ83 578 aa12.95□□□□□ -0.34
CMTM3-209ENST00000565003 LRRC37AA6NMS7 1700 aa12.95□□□□□ -0.34
CMTM3-209ENST00000565003 IL16Q14005 1332 aa12.94□□□□□ -0.34
CMTM3-209ENST00000565003 LTBP1Q14766 1721 aa12.94□□□□□ -0.34
CMTM3-209ENST00000565003 IRS4O14654 1257 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms