RNA–Protein interactions for RNA: ENST00000564480.1

KNOP1-202, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS ALT2 TSL 2

Gene KNOP1, Length 1,020 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-202ENST00000564480 MYL6BP14649 208 aa18.29■□□□□ 0.52
KNOP1-202ENST00000564480 HOXA10P31260 410 aaPredicted RBP18.29■□□□□ 0.52
KNOP1-202ENST00000564480 ZBTB3Q9H5J0 574 aa18.29■□□□□ 0.52
KNOP1-202ENST00000564480 LTBP1Q14766 1721 aa18.29■□□□□ 0.52
KNOP1-202ENST00000564480 LAMB4A4D0S4 1761 aa18.28■□□□□ 0.52
KNOP1-202ENST00000564480 PNMA8AQ86V59 439 aaPredicted RBP18.28■□□□□ 0.52
KNOP1-202ENST00000564480 ZNF34Q8IZ26 560 aa18.28■□□□□ 0.52
KNOP1-202ENST00000564480 PRDM10Q9NQV6 1147 aa18.28■□□□□ 0.52
KNOP1-202ENST00000564480 GJA3Q9Y6H8 435 aa18.28■□□□□ 0.52
KNOP1-202ENST00000564480 KDM3BQ7LBC6 1761 aa18.27■□□□□ 0.52
KNOP1-202ENST00000564480 RASSF10A6NK89 507 aa18.27■□□□□ 0.52
KNOP1-202ENST00000564480 TCERG1O14776 1098 aaKnown RBP18.27■□□□□ 0.52
KNOP1-202ENST00000564480 EPS15P42566 896 aa18.27■□□□□ 0.52
KNOP1-202ENST00000564480 SCNN1DP51172 638 aa18.27■□□□□ 0.52
KNOP1-202ENST00000564480 JDP2Q8WYK2 163 aa18.27■□□□□ 0.52
KNOP1-202ENST00000564480 NYXQ9GZU5 481 aa18.27■□□□□ 0.52
KNOP1-202ENST00000564480 NUP98P52948 1817 aa18.26■□□□□ 0.51
KNOP1-202ENST00000564480 NTSR2O95665 410 aa18.26■□□□□ 0.51
KNOP1-202ENST00000564480 CTCFP49711 727 aaPredicted RBP18.26■□□□□ 0.51
KNOP1-202ENST00000564480 LBX1P52954 281 aa18.26■□□□□ 0.51
KNOP1-202ENST00000564480 DEFB115Q30KQ5 88 aa18.26■□□□□ 0.51
KNOP1-202ENST00000564480 LRP10Q7Z4F1 713 aa18.26■□□□□ 0.51
KNOP1-202ENST00000564480 CC2D2BQ6DHV5 1058 aa18.25■□□□□ 0.51
KNOP1-202ENST00000564480 PNISRQ8TF01 805 aaKnown RBP18.25■□□□□ 0.51
KNOP1-202ENST00000564480 RPGRQ92834 1020 aaKnown RBP18.25■□□□□ 0.51
KNOP1-202ENST00000564480 DLG5Q8TDM6 1919 aa18.25■□□□□ 0.51
KNOP1-202ENST00000564480 RIC1Q4ADV7 1423 aa18.24■□□□□ 0.51
KNOP1-202ENST00000564480 EIF6P56537 245 aaKnown RBP18.24■□□□□ 0.51
KNOP1-202ENST00000564480 PDIA6Q15084 440 aa18.24■□□□□ 0.51
KNOP1-202ENST00000564480 NFE2L2Q16236 605 aa18.24■□□□□ 0.51
KNOP1-202ENST00000564480 KIF6Q6ZMV9 814 aa18.24■□□□□ 0.51
KNOP1-202ENST00000564480 LARGE2Q8N3Y3 721 aa18.24■□□□□ 0.51
KNOP1-202ENST00000564480 CRAMP1Q96RY5 1269 aa18.24■□□□□ 0.51
KNOP1-202ENST00000564480 DDX21Q9NR30 783 aaKnown RBP eCLIP18.24■□□□□ 0.51
KNOP1-202ENST00000564480 WDR33Q9C0J8 1336 aaKnown RBP18.23■□□□□ 0.51
KNOP1-202ENST00000564480 IBTKQ9P2D0 1353 aaPredicted RBP18.23■□□□□ 0.51
KNOP1-202ENST00000564480 TRAF5O00463 557 aa18.23■□□□□ 0.51
KNOP1-202ENST00000564480 PPEF1O14829 653 aaPredicted RBP18.23■□□□□ 0.51
KNOP1-202ENST00000564480 HSPA8P11142 646 aaKnown RBP18.23■□□□□ 0.51
KNOP1-202ENST00000564480 GIGYF2Q6Y7W6 1299 aaKnown RBP18.23■□□□□ 0.51
KNOP1-202ENST00000564480 AIDAQ96BJ3 306 aa18.23■□□□□ 0.51
KNOP1-202ENST00000564480 ANXA1P04083 346 aa18.22■□□□□ 0.51
KNOP1-202ENST00000564480 PROSER3Q2NL68 480 aa18.22■□□□□ 0.51
KNOP1-202ENST00000564480 CST9Q5W186 159 aa18.22■□□□□ 0.51
KNOP1-202ENST00000564480 RBM17Q96I25 401 aaKnown RBP18.22■□□□□ 0.51
KNOP1-202ENST00000564480 ABT1Q9ULW3 272 aaKnown RBP18.22■□□□□ 0.51
KNOP1-202ENST00000564480 AOC3Q16853 763 aa18.2■□□□□ 0.5
KNOP1-202ENST00000564480 SLC10A5Q5PT55 438 aa18.2■□□□□ 0.5
KNOP1-202ENST00000564480 LMOD1P29536 600 aaPredicted RBP18.19■□□□□ 0.5
KNOP1-202ENST00000564480 ATP6V0A2Q9Y487 856 aa18.19■□□□□ 0.5
KNOP1-202ENST00000564480 PPIP5K2O43314 1243 aa18.18■□□□□ 0.5
KNOP1-202ENST00000564480 NEFMP07197 916 aa18.18■□□□□ 0.5
KNOP1-202ENST00000564480 EIF2S2P20042 333 aaKnown RBP18.18■□□□□ 0.5
KNOP1-202ENST00000564480 CXCL9Q07325 125 aa18.18■□□□□ 0.5
KNOP1-202ENST00000564480 GRIPAP1Q4V328 841 aa18.18■□□□□ 0.5
KNOP1-202ENST00000564480 CYP4F22Q6NT55 531 aa18.18■□□□□ 0.5
KNOP1-202ENST00000564480 NIM1KQ8IY84 436 aa18.18■□□□□ 0.5
KNOP1-202ENST00000564480 NLRP3Q96P20 1036 aa18.18■□□□□ 0.5
KNOP1-202ENST00000564480 ABCC4O15439 1325 aa18.18■□□□□ 0.5
KNOP1-202ENST00000564480 ERBB4Q15303 1308 aa18.18■□□□□ 0.5
KNOP1-202ENST00000564480 PARP10Q53GL7 1025 aa18.17■□□□□ 0.5
KNOP1-202ENST00000564480 USP50Q70EL3 339 aaPredicted RBP18.17■□□□□ 0.5
KNOP1-202ENST00000564480 PPP1R42Q7Z4L9 355 aa18.17■□□□□ 0.5
KNOP1-202ENST00000564480 CAPNS2Q96L46 248 aa18.17■□□□□ 0.5
KNOP1-202ENST00000564480 UTP14AQ9BVJ6 771 aaKnown RBP18.17■□□□□ 0.5
KNOP1-202ENST00000564480 GPRC5DQ9NZD1 345 aa18.17■□□□□ 0.5
KNOP1-202ENST00000564480 TSPYL4Q9UJ04 414 aa18.17■□□□□ 0.5
KNOP1-202ENST00000564480 MAP2K1Q02750 393 aaPredicted RBP18.16■□□□□ 0.5
KNOP1-202ENST00000564480 ZNF428Q96B54 188 aa18.16■□□□□ 0.5
KNOP1-202ENST00000564480 HCLS1P14317 486 aaPredicted RBP18.15■□□□□ 0.5
KNOP1-202ENST00000564480 GRM1Q13255 1194 aa18.15■□□□□ 0.5
KNOP1-202ENST00000564480 NECTIN2Q92692 538 aa18.15■□□□□ 0.5
KNOP1-202ENST00000564480 ABHD8Q96I13 439 aa18.15■□□□□ 0.5
KNOP1-202ENST00000564480 RTFDC1Q9BY42 306 aaPredicted RBP18.15■□□□□ 0.5
KNOP1-202ENST00000564480 ZNRF3Q9ULT6 936 aa18.15■□□□□ 0.5
KNOP1-202ENST00000564480 AOC2O75106 756 aa18.14■□□□□ 0.49
KNOP1-202ENST00000564480 GMPSP49915 693 aaPredicted RBP18.14■□□□□ 0.49
KNOP1-202ENST00000564480 HIRAP54198 1017 aaPredicted RBP18.14■□□□□ 0.49
KNOP1-202ENST00000564480 PAXIP1Q6ZW49 1069 aaPredicted RBP18.14■□□□□ 0.49
KNOP1-202ENST00000564480 COPS6Q7L5N1 327 aa18.14■□□□□ 0.49
KNOP1-202ENST00000564480 NLRP10Q86W26 655 aa18.14■□□□□ 0.49
KNOP1-202ENST00000564480 GPR101Q96P66 508 aaPredicted RBP18.14■□□□□ 0.49
KNOP1-202ENST00000564480 ADARB2Q9NS39 739 aaKnown RBP18.14■□□□□ 0.49
KNOP1-202ENST00000564480 TLL2Q9Y6L7 1015 aa18.14■□□□□ 0.49
KNOP1-202ENST00000564480 THSD7BQ9C0I4 1608 aa18.13■□□□□ 0.49
KNOP1-202ENST00000564480 SHTN1A0MZ66 631 aa18.13■□□□□ 0.49
KNOP1-202ENST00000564480 RIPK4P57078 832 aa18.13■□□□□ 0.49
KNOP1-202ENST00000564480 AIMP1Q12904 312 aaKnown RBP18.13■□□□□ 0.49
KNOP1-202ENST00000564480 KRT24Q2M2I5 525 aa18.13■□□□□ 0.49
KNOP1-202ENST00000564480 SP8Q8IXZ3 490 aa18.13■□□□□ 0.49
KNOP1-202ENST00000564480 XAGE3Q8WTP9 111 aa18.13■□□□□ 0.49
KNOP1-202ENST00000564480 GLIS2Q9BZE0 524 aaPredicted RBP18.13■□□□□ 0.49
KNOP1-202ENST00000564480 TSKSQ9UJT2 592 aa18.13■□□□□ 0.49
KNOP1-202ENST00000564480 MAPK8IP3Q9UPT6 1336 aa18.13■□□□□ 0.49
KNOP1-202ENST00000564480 RAD17O75943 681 aa18.12■□□□□ 0.49
KNOP1-202ENST00000564480 VPS33BQ9H267 617 aa18.12■□□□□ 0.49
KNOP1-202ENST00000564480 PGAP2Q9UHJ9 254 aa18.12■□□□□ 0.49
KNOP1-202ENST00000564480 YDJCA8MPS7 323 aa18.11■□□□□ 0.49
KNOP1-202ENST00000564480 BBOX1O75936 387 aa18.11■□□□□ 0.49
KNOP1-202ENST00000564480 KIAA2012Q0VF49 1180 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms