RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 CRAMP1Q96RY5 1269 aa21.91■■□□□ 1.1
CCNF-203ENST00000564236 CACNA1SQ13698 1873 aa21.91■■□□□ 1.1
CCNF-203ENST00000564236 DDNO94850 711 aaPredicted RBP21.9■■□□□ 1.1
CCNF-203ENST00000564236 EIF2S2P20042 333 aaKnown RBP21.9■■□□□ 1.1
CCNF-203ENST00000564236 OLFM4Q6UX06 510 aa21.9■■□□□ 1.1
CCNF-203ENST00000564236 DDX21Q9NR30 783 aaKnown RBP eCLIP21.89■■□□□ 1.09
CCNF-203ENST00000564236 FZD9O00144 591 aa21.88■■□□□ 1.09
CCNF-203ENST00000564236 ZNF277Q9NRM2 450 aaPredicted RBP21.88■■□□□ 1.09
CCNF-203ENST00000564236 IQCA1LA6NCM1 817 aa21.87■■□□□ 1.09
CCNF-203ENST00000564236 IARSP41252 1262 aaKnown RBP21.87■■□□□ 1.09
CCNF-203ENST00000564236 HTRA3P83110 453 aa21.87■■□□□ 1.09
CCNF-203ENST00000564236 NEUROD2Q15784 382 aa21.87■■□□□ 1.09
CCNF-203ENST00000564236 HSP90AB3PQ58FF7 597 aa21.87■■□□□ 1.09
CCNF-203ENST00000564236 SYNE4Q8N205 404 aa21.87■■□□□ 1.09
CCNF-203ENST00000564236 RPGRQ92834 1020 aaKnown RBP21.87■■□□□ 1.09
CCNF-203ENST00000564236 ANXA1P04083 346 aa21.86■■□□□ 1.09
CCNF-203ENST00000564236 COPS6Q7L5N1 327 aa21.86■■□□□ 1.09
CCNF-203ENST00000564236 RBM17Q96I25 401 aaKnown RBP21.86■■□□□ 1.09
CCNF-203ENST00000564236 CFAP44Q96MT7 982 aa21.86■■□□□ 1.09
CCNF-203ENST00000564236 UTP14AQ9BVJ6 771 aaKnown RBP21.86■■□□□ 1.09
CCNF-203ENST00000564236 KRT24Q2M2I5 525 aa21.85■■□□□ 1.09
CCNF-203ENST00000564236 C3orf67Q6ZVT6 689 aa21.85■■□□□ 1.09
CCNF-203ENST00000564236 XAGE3Q8WTP9 111 aa21.85■■□□□ 1.09
CCNF-203ENST00000564236 ZNF541Q9H0D2 1346 aa21.84■■□□□ 1.09
CCNF-203ENST00000564236 ZNF853P0CG23 659 aa21.84■■□□□ 1.09
CCNF-203ENST00000564236 TCIRG1Q13488 830 aa21.84■■□□□ 1.09
CCNF-203ENST00000564236 IFFO2Q5TF58 517 aa21.84■■□□□ 1.09
CCNF-203ENST00000564236 CHADLQ6NUI6 762 aa21.84■■□□□ 1.09
CCNF-203ENST00000564236 NLRP10Q86W26 655 aa21.84■■□□□ 1.09
CCNF-203ENST00000564236 NLRP3Q96P20 1036 aa21.84■■□□□ 1.09
CCNF-203ENST00000564236 SCN4AP35499 1836 aa21.83■■□□□ 1.09
CCNF-203ENST00000564236 TAF1DQ9H5J8 278 aaPredicted RBP21.83■■□□□ 1.09
CCNF-203ENST00000564236 PPEF1O14829 653 aaPredicted RBP21.82■■□□□ 1.08
CCNF-203ENST00000564236 LDHDQ86WU2 507 aa21.82■■□□□ 1.08
CCNF-203ENST00000564236 CHPF2Q9P2E5 772 aa21.82■■□□□ 1.08
CCNF-203ENST00000564236 POTEIP0CG38 1075 aa21.81■■□□□ 1.08
CCNF-203ENST00000564236 POTEJP0CG39 1038 aa21.81■■□□□ 1.08
CCNF-203ENST00000564236 GPC2Q8N158 579 aa21.81■■□□□ 1.08
CCNF-203ENST00000564236 VPS33BQ9H267 617 aa21.81■■□□□ 1.08
CCNF-203ENST00000564236 DBF4Q9UBU7 674 aaPredicted RBP21.81■■□□□ 1.08
CCNF-203ENST00000564236 ANKRD36CQ5JPF3 1778 aa21.81■■□□□ 1.08
CCNF-203ENST00000564236 COL4A5P29400 1685 aa21.8■■□□□ 1.08
CCNF-203ENST00000564236 HDGFL1Q5TGJ6 251 aa21.8■■□□□ 1.08
CCNF-203ENST00000564236 PLBD2Q8NHP8 589 aa21.8■■□□□ 1.08
CCNF-203ENST00000564236 NECTIN2Q92692 538 aa21.8■■□□□ 1.08
CCNF-203ENST00000564236 ATP6V0A2Q9Y487 856 aa21.8■■□□□ 1.08
CCNF-203ENST00000564236 PASKQ96RG2 1323 aa21.8■■□□□ 1.08
CCNF-203ENST00000564236 AIMP1Q12904 312 aaKnown RBP21.79■■□□□ 1.08
CCNF-203ENST00000564236 JDP2Q8WYK2 163 aa21.79■■□□□ 1.08
CCNF-203ENST00000564236 MBIPQ9NS73 344 aa21.79■■□□□ 1.08
CCNF-203ENST00000564236 IFT57Q9NWB7 429 aa21.79■■□□□ 1.08
CCNF-203ENST00000564236 HACL1Q9UJ83 578 aa21.79■■□□□ 1.08
CCNF-203ENST00000564236 LAS1LQ9Y4W2 734 aaKnown RBP21.79■■□□□ 1.08
CCNF-203ENST00000564236 ADAMTSL1Q8N6G6 1762 aa21.79■■□□□ 1.08
CCNF-203ENST00000564236 ABCC4O15439 1325 aa21.79■■□□□ 1.08
CCNF-203ENST00000564236 BBOX1O75936 387 aa21.78■■□□□ 1.08
CCNF-203ENST00000564236 ISCA1Q9BUE6 129 aa21.78■■□□□ 1.08
CCNF-203ENST00000564236 RTFDC1Q9BY42 306 aaPredicted RBP21.78■■□□□ 1.08
CCNF-203ENST00000564236 CREBZFQ9NS37 354 aa21.78■■□□□ 1.08
CCNF-203ENST00000564236 SH3TC1Q8TE82 1336 aa21.78■■□□□ 1.08
CCNF-203ENST00000564236 PCNTO95613 3336 aa21.77■■□□□ 1.08
CCNF-203ENST00000564236 APAF1O14727 1248 aa21.77■■□□□ 1.08
CCNF-203ENST00000564236 CALD1Q05682 793 aaKnown RBP21.77■■□□□ 1.08
CCNF-203ENST00000564236 DUSP27Q5VZP5 1158 aa21.77■■□□□ 1.08
CCNF-203ENST00000564236 ANKRD13DQ6ZTN6 518 aa21.77■■□□□ 1.08
CCNF-203ENST00000564236 PNMA8AQ86V59 439 aaPredicted RBP21.77■■□□□ 1.08
CCNF-203ENST00000564236 HYPKQ9NX55 129 aa21.77■■□□□ 1.08
CCNF-203ENST00000564236 EPHX2P34913 555 aa21.76■■□□□ 1.07
CCNF-203ENST00000564236 TRIM28Q13263 835 aaKnown RBP21.76■■□□□ 1.07
CCNF-203ENST00000564236 TRMT112Q9UI30 125 aaKnown RBP21.76■■□□□ 1.07
CCNF-203ENST00000564236 SLC51AQ86UW1 340 aa21.75■■□□□ 1.07
CCNF-203ENST00000564236 SP8Q8IXZ3 490 aa21.75■■□□□ 1.07
CCNF-203ENST00000564236 ITGBL1O95965 494 aaPredicted RBP21.74■■□□□ 1.07
CCNF-203ENST00000564236 HCLS1P14317 486 aaPredicted RBP21.74■■□□□ 1.07
CCNF-203ENST00000564236 EIF6P56537 245 aaKnown RBP21.74■■□□□ 1.07
CCNF-203ENST00000564236 GNAI1P63096 354 aa21.74■■□□□ 1.07
CCNF-203ENST00000564236 LARGE2Q8N3Y3 721 aa21.74■■□□□ 1.07
CCNF-203ENST00000564236 GRAPQ13588 217 aa21.73■■□□□ 1.07
CCNF-203ENST00000564236 TMC4Q7Z404 712 aa21.73■■□□□ 1.07
CCNF-203ENST00000564236 SUPT20HQ8NEM7 779 aa21.73■■□□□ 1.07
CCNF-203ENST00000564236 GRAPLQ8TC17 118 aaPredicted RBP21.73■■□□□ 1.07
CCNF-203ENST00000564236 TMX4Q9H1E5 349 aaPredicted RBP21.73■■□□□ 1.07
CCNF-203ENST00000564236 LAMB2P55268 1798 aa21.72■■□□□ 1.07
CCNF-203ENST00000564236 DDX46Q7L014 1031 aaKnown RBP21.72■■□□□ 1.07
CCNF-203ENST00000564236 SCNN1DP51172 638 aa21.71■■□□□ 1.07
CCNF-203ENST00000564236 SF3B3Q15393 1217 aaKnown RBP21.71■■□□□ 1.07
CCNF-203ENST00000564236 PPIP5K2O43314 1243 aa21.7■■□□□ 1.06
CCNF-203ENST00000564236 NIM1KQ8IY84 436 aa21.7■■□□□ 1.06
CCNF-203ENST00000564236 LTBP1Q14766 1721 aa21.69■■□□□ 1.06
CCNF-203ENST00000564236 TCERG1O14776 1098 aaKnown RBP21.69■■□□□ 1.06
CCNF-203ENST00000564236 KIAA2012Q0VF49 1180 aa21.69■■□□□ 1.06
CCNF-203ENST00000564236 AOC3Q16853 763 aa21.69■■□□□ 1.06
CCNF-203ENST00000564236 CCDC27Q2M243 656 aa21.69■■□□□ 1.06
CCNF-203ENST00000564236 NCBP3Q53F19 620 aaKnown RBP21.69■■□□□ 1.06
CCNF-203ENST00000564236 EAPPQ56P03 285 aaPredicted RBP21.69■■□□□ 1.06
CCNF-203ENST00000564236 CHMP4AQ9BY43 222 aa21.69■■□□□ 1.06
CCNF-203ENST00000564236 LRRC37AA6NMS7 1700 aa21.69■■□□□ 1.06
CCNF-203ENST00000564236 DPP8Q6V1X1 898 aaPredicted RBP21.68■■□□□ 1.06
CCNF-203ENST00000564236 MPNDQ8N594 471 aa21.68■■□□□ 1.06
CCNF-203ENST00000564236 CNTNAP1P78357 1384 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms