RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 SSH1Q8WYL5 1049 aa12.38□□□□□ -0.43
UBFD1-203ENST00000564106 ARHGAP45Q92619 1136 aa12.38□□□□□ -0.43
UBFD1-203ENST00000564106 ZNF622Q969S3 477 aaKnown RBP eCLIP12.38□□□□□ -0.43
UBFD1-203ENST00000564106 CRBNQ96SW2 442 aa12.38□□□□□ -0.43
UBFD1-203ENST00000564106 UBN2Q6ZU65 1347 aa12.37□□□□□ -0.43
UBFD1-203ENST00000564106 WDR90Q96KV7 1748 aa12.37□□□□□ -0.43
UBFD1-203ENST00000564106 POTECB2RU33 542 aa12.37□□□□□ -0.43
UBFD1-203ENST00000564106 H0YIN7 160 aa12.37□□□□□ -0.43
UBFD1-203ENST00000564106 SRGNP10124 158 aa12.37□□□□□ -0.43
UBFD1-203ENST00000564106 PDIA6Q15084 440 aa12.37□□□□□ -0.43
UBFD1-203ENST00000564106 SETDB2Q96T68 719 aa12.37□□□□□ -0.43
UBFD1-203ENST00000564106 CHMP4BQ9H444 224 aaKnown RBP12.37□□□□□ -0.43
UBFD1-203ENST00000564106 COL4A5P29400 1685 aa12.37□□□□□ -0.43
UBFD1-203ENST00000564106 SNED1Q8TER0 1413 aa12.37□□□□□ -0.43
UBFD1-203ENST00000564106 PRPF40BQ6NWY9 871 aaKnown RBP12.36□□□□□ -0.43
UBFD1-203ENST00000564106 ATF7IPQ6VMQ6 1270 aa12.36□□□□□ -0.43
UBFD1-203ENST00000564106 C3orf67Q6ZVT6 689 aa12.36□□□□□ -0.43
UBFD1-203ENST00000564106 DZIP1LQ8IYY4 767 aaKnown RBP12.36□□□□□ -0.43
UBFD1-203ENST00000564106 C7orf43Q8WVR3 580 aa12.36□□□□□ -0.43
UBFD1-203ENST00000564106 BCL2L13Q9BXK5 485 aa12.36□□□□□ -0.43
UBFD1-203ENST00000564106 RRAGCQ9HB90 399 aa12.36□□□□□ -0.43
UBFD1-203ENST00000564106 NIP7Q9Y221 180 aaKnown RBP eCLIP12.36□□□□□ -0.43
UBFD1-203ENST00000564106 COL4A1P02462 1669 aa12.35□□□□□ -0.43
UBFD1-203ENST00000564106 HOXB7P09629 217 aa12.35□□□□□ -0.43
UBFD1-203ENST00000564106 MYL6BP14649 208 aa12.35□□□□□ -0.43
UBFD1-203ENST00000564106 C20orf194Q5TEA3 1177 aa12.35□□□□□ -0.43
UBFD1-203ENST00000564106 B4GALNT3Q6L9W6 998 aa12.35□□□□□ -0.43
UBFD1-203ENST00000564106 NUTM1Q86Y26 1132 aa12.35□□□□□ -0.43
UBFD1-203ENST00000564106 ZBTB3Q9H5J0 574 aa12.35□□□□□ -0.43
UBFD1-203ENST00000564106 LAMB2P55268 1798 aa12.35□□□□□ -0.43
UBFD1-203ENST00000564106 ANKRD36CQ5JPF3 1778 aa12.34□□□□□ -0.43
UBFD1-203ENST00000564106 KLRG2A4D1S0 409 aaPredicted RBP12.34□□□□□ -0.43
UBFD1-203ENST00000564106 LMNB1P20700 586 aa12.34□□□□□ -0.43
UBFD1-203ENST00000564106 GPTP24298 496 aa12.34□□□□□ -0.43
UBFD1-203ENST00000564106 NBPF5PQ86XG9 351 aaPredicted RBP12.34□□□□□ -0.43
UBFD1-203ENST00000564106 C8orf58Q8NAV2 365 aa12.34□□□□□ -0.43
UBFD1-203ENST00000564106 DDX19BQ9UMR2 479 aa12.34□□□□□ -0.43
UBFD1-203ENST00000564106 PTPRCP08575 1304 aa12.34□□□□□ -0.43
UBFD1-203ENST00000564106 TOMM70O94826 608 aa12.33□□□□□ -0.44
UBFD1-203ENST00000564106 PDE6BP35913 854 aa12.33□□□□□ -0.44
UBFD1-203ENST00000564106 MVPQ14764 893 aaKnown RBP12.33□□□□□ -0.44
UBFD1-203ENST00000564106 ERFEQ4G0M1 354 aa12.33□□□□□ -0.44
UBFD1-203ENST00000564106 CLEC4GQ6UXB4 293 aa12.33□□□□□ -0.44
UBFD1-203ENST00000564106 MRPL50Q8N5N7 158 aaKnown RBP12.33□□□□□ -0.44
UBFD1-203ENST00000564106 TSPYL6Q8N831 410 aa12.33□□□□□ -0.44
UBFD1-203ENST00000564106 NECTIN2Q92692 538 aa12.33□□□□□ -0.44
UBFD1-203ENST00000564106 STK31Q9BXU1 1019 aa12.33□□□□□ -0.44
UBFD1-203ENST00000564106 API5Q9BZZ5 524 aaKnown RBP12.33□□□□□ -0.44
UBFD1-203ENST00000564106 NOB1Q9ULX3 412 aaKnown RBP12.33□□□□□ -0.44
UBFD1-203ENST00000564106 TAF1P21675 1872 aa12.33□□□□□ -0.44
UBFD1-203ENST00000564106 MAP3K15Q6ZN16 1313 aa12.33□□□□□ -0.44
UBFD1-203ENST00000564106 ELL2O00472 640 aaPredicted RBP12.32□□□□□ -0.44
UBFD1-203ENST00000564106 POTEIP0CG38 1075 aa12.32□□□□□ -0.44
UBFD1-203ENST00000564106 POTEJP0CG39 1038 aa12.32□□□□□ -0.44
UBFD1-203ENST00000564106 TRIM27P14373 513 aa12.32□□□□□ -0.44
UBFD1-203ENST00000564106 ST5P78524 1137 aa12.32□□□□□ -0.44
UBFD1-203ENST00000564106 CCDC30Q5VVM6 783 aa12.32□□□□□ -0.44
UBFD1-203ENST00000564106 SUSD4Q5VX71 490 aa12.32□□□□□ -0.44
UBFD1-203ENST00000564106 STYK1Q6J9G0 422 aa12.32□□□□□ -0.44
UBFD1-203ENST00000564106 DNAJC5GQ8N7S2 189 aa12.32□□□□□ -0.44
UBFD1-203ENST00000564106 CLUAP1Q96AJ1 413 aa12.32□□□□□ -0.44
UBFD1-203ENST00000564106 MASTLQ96GX5 879 aa12.32□□□□□ -0.44
UBFD1-203ENST00000564106 GLTPD2A6NH11 291 aa12.31□□□□□ -0.44
UBFD1-203ENST00000564106 NTSR2O95665 410 aa12.31□□□□□ -0.44
UBFD1-203ENST00000564106 EIF2S2P20042 333 aaKnown RBP12.31□□□□□ -0.44
UBFD1-203ENST00000564106 SYNE4Q8N205 404 aa12.31□□□□□ -0.44
UBFD1-203ENST00000564106 PANK1Q8TE04 598 aa12.31□□□□□ -0.44
UBFD1-203ENST00000564106 COG6Q9Y2V7 657 aa12.31□□□□□ -0.44
UBFD1-203ENST00000564106 CENPQQ7L2Z9 268 aaPredicted RBP12.3□□□□□ -0.44
UBFD1-203ENST00000564106 ZNF34Q8IZ26 560 aa12.3□□□□□ -0.44
UBFD1-203ENST00000564106 RBM46Q8TBY0 533 aaKnown RBP12.3□□□□□ -0.44
UBFD1-203ENST00000564106 LTBP1Q14766 1721 aa12.3□□□□□ -0.44
UBFD1-203ENST00000564106 ZNF541Q9H0D2 1346 aa12.3□□□□□ -0.44
UBFD1-203ENST00000564106 DDX60Q8IY21 1712 aaKnown RBP12.29□□□□□ -0.44
UBFD1-203ENST00000564106 CRY2Q49AN0 593 aa12.29□□□□□ -0.44
UBFD1-203ENST00000564106 CNKSR1Q969H4 720 aa12.29□□□□□ -0.44
UBFD1-203ENST00000564106 TAOK3Q9H2K8 898 aa12.29□□□□□ -0.44
UBFD1-203ENST00000564106 ZNF277Q9NRM2 450 aaPredicted RBP12.29□□□□□ -0.44
UBFD1-203ENST00000564106 ZNF652Q9Y2D9 606 aa12.29□□□□□ -0.44
UBFD1-203ENST00000564106 ABCC4O15439 1325 aa12.29□□□□□ -0.44
UBFD1-203ENST00000564106 KDM2BQ8NHM5 1336 aa12.29□□□□□ -0.44
UBFD1-203ENST00000564106 LTBP3Q9NS15 1303 aa12.29□□□□□ -0.44
UBFD1-203ENST00000564106 ERVV-1B6SEH8 477 aa12.28□□□□□ -0.44
UBFD1-203ENST00000564106 RGL2O15211 777 aa12.28□□□□□ -0.44
UBFD1-203ENST00000564106 NPHP1O15259 732 aa12.28□□□□□ -0.44
UBFD1-203ENST00000564106 DDNO94850 711 aaPredicted RBP12.28□□□□□ -0.44
UBFD1-203ENST00000564106 NPR1P16066 1061 aa12.28□□□□□ -0.44
UBFD1-203ENST00000564106 TPTE2Q6XPS3 522 aa12.28□□□□□ -0.44
UBFD1-203ENST00000564106 NPM2Q86SE8 214 aaKnown RBP12.28□□□□□ -0.44
UBFD1-203ENST00000564106 ITPRIPQ8IWB1 547 aa12.28□□□□□ -0.44
UBFD1-203ENST00000564106 ZC3H4Q9UPT8 1303 aaKnown RBP12.28□□□□□ -0.44
UBFD1-203ENST00000564106 RIC1Q4ADV7 1423 aa12.28□□□□□ -0.44
UBFD1-203ENST00000564106 PCNTO95613 3336 aa12.27□□□□□ -0.44
UBFD1-203ENST00000564106 RLBP1P12271 317 aa12.27□□□□□ -0.45
UBFD1-203ENST00000564106 GIGYF2Q6Y7W6 1299 aaKnown RBP12.27□□□□□ -0.45
UBFD1-203ENST00000564106 XAGE3Q8WTP9 111 aa12.27□□□□□ -0.45
UBFD1-203ENST00000564106 PDZRN3Q9UPQ7 1066 aa12.27□□□□□ -0.45
UBFD1-203ENST00000564106 ADAMTSL1Q8N6G6 1762 aa12.27□□□□□ -0.45
UBFD1-203ENST00000564106 SLC4A2P04920 1241 aa12.26□□□□□ -0.45
UBFD1-203ENST00000564106 APLP1P51693 650 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms