RNA–Protein interactions for RNA: ENST00000563888.6

TCF4-221, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-221ENST00000563888 NFAT5O94916 1531 aa10.39□□□□□ -0.75
TCF4-221ENST00000563888 KDM4AO75164 1064 aa10.39□□□□□ -0.75
TCF4-221ENST00000563888 STAC3Q96MF2 364 aa10.39□□□□□ -0.75
TCF4-221ENST00000563888 TK2O00142 265 aa10.38□□□□□ -0.75
TCF4-221ENST00000563888 SSFA2P28290 1259 aa10.38□□□□□ -0.75
TCF4-221ENST00000563888 CSPP1Q1MSJ5 1256 aa10.38□□□□□ -0.75
TCF4-221ENST00000563888 LAPTM4BQ86VI4 370 aa10.38□□□□□ -0.75
TCF4-221ENST00000563888 NME9Q86XW9 330 aa10.38□□□□□ -0.75
TCF4-221ENST00000563888 SLF2Q8IX21 1173 aa10.38□□□□□ -0.75
TCF4-221ENST00000563888 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.38□□□□□ -0.75
TCF4-221ENST00000563888 TNRC18O15417 2968 aaPredicted RBP10.37□□□□□ -0.75
TCF4-221ENST00000563888 RNF40O75150 1001 aa10.37□□□□□ -0.75
TCF4-221ENST00000563888 KCNA3P22001 575 aa10.37□□□□□ -0.75
TCF4-221ENST00000563888 GCGRP47871 477 aa10.37□□□□□ -0.75
TCF4-221ENST00000563888 USP46P62068 366 aa10.37□□□□□ -0.75
TCF4-221ENST00000563888 DALRD3Q5D0E6 543 aaKnown RBP10.37□□□□□ -0.75
TCF4-221ENST00000563888 ADGRD1Q6QNK2 874 aa10.37□□□□□ -0.75
TCF4-221ENST00000563888 C10orf71Q711Q0 1435 aa10.37□□□□□ -0.75
TCF4-221ENST00000563888 PIM2Q9P1W9 311 aa10.37□□□□□ -0.75
TCF4-221ENST00000563888 LIMD1Q9UGP4 676 aa10.37□□□□□ -0.75
TCF4-221ENST00000563888 KTN1Q86UP2 1357 aaKnown RBP10.37□□□□□ -0.75
TCF4-221ENST00000563888 LY75O60449 1722 aa10.36□□□□□ -0.75
TCF4-221ENST00000563888 MOXD2PA6NHM9 499 aa10.36□□□□□ -0.75
TCF4-221ENST00000563888 SPTLC1O15269 473 aa10.36□□□□□ -0.75
TCF4-221ENST00000563888 MRPL50Q8N5N7 158 aaKnown RBP10.36□□□□□ -0.75
TCF4-221ENST00000563888 LINC00116Q8NCU8 138 aa10.36□□□□□ -0.75
TCF4-221ENST00000563888 CCDC87Q9NVE4 849 aa10.36□□□□□ -0.75
TCF4-221ENST00000563888 EVC2Q86UK5 1308 aa10.35□□□□□ -0.75
TCF4-221ENST00000563888 GLTPD2A6NH11 291 aa10.35□□□□□ -0.75
TCF4-221ENST00000563888 NDUFV2P19404 249 aa10.35□□□□□ -0.75
TCF4-221ENST00000563888 TMF1P82094 1093 aa10.35□□□□□ -0.75
TCF4-221ENST00000563888 RSBN1LQ6PCB5 846 aaPredicted RBP10.35□□□□□ -0.75
TCF4-221ENST00000563888 SAMD7Q7Z3H4 446 aa10.35□□□□□ -0.75
TCF4-221ENST00000563888 IP6K1Q92551 441 aa10.35□□□□□ -0.75
TCF4-221ENST00000563888 DCAF5Q96JK2 942 aa10.35□□□□□ -0.75
TCF4-221ENST00000563888 DOT1LQ8TEK3 1739 aa10.34□□□□□ -0.75
TCF4-221ENST00000563888 GJA5P36382 358 aa10.34□□□□□ -0.75
TCF4-221ENST00000563888 RFC5P40937 340 aa10.34□□□□□ -0.75
TCF4-221ENST00000563888 VEGFBP49765 207 aa10.34□□□□□ -0.75
TCF4-221ENST00000563888 RGS19P49795 217 aa10.34□□□□□ -0.75
TCF4-221ENST00000563888 RASSF7Q02833 373 aa10.34□□□□□ -0.75
TCF4-221ENST00000563888 GRIPAP1Q4V328 841 aa10.34□□□□□ -0.75
TCF4-221ENST00000563888 TMEM259Q4ZIN3 620 aa10.34□□□□□ -0.75
TCF4-221ENST00000563888 NLGN1Q8N2Q7 840 aa10.34□□□□□ -0.75
TCF4-221ENST00000563888 USHBP1Q8N6Y0 703 aa10.34□□□□□ -0.75
TCF4-221ENST00000563888 SMARCC1Q92922 1105 aaPredicted RBP10.34□□□□□ -0.75
TCF4-221ENST00000563888 PARP3Q9Y6F1 533 aa10.34□□□□□ -0.75
TCF4-221ENST00000563888 NSD3Q9BZ95 1437 aa10.33□□□□□ -0.76
TCF4-221ENST00000563888 GOLGA8CPA6NN73 597 aa10.33□□□□□ -0.76
TCF4-221ENST00000563888 SLC10A3P09131 477 aa10.33□□□□□ -0.76
TCF4-221ENST00000563888 TUSC1Q2TAM9 212 aa10.33□□□□□ -0.76
TCF4-221ENST00000563888 TRAPPC3LQ5T215 181 aa10.33□□□□□ -0.76
TCF4-221ENST00000563888 WBP1LQ9NX94 342 aa10.33□□□□□ -0.76
TCF4-221ENST00000563888 LOC102724428A0A0B4J2F2 783 aa10.32□□□□□ -0.76
TCF4-221ENST00000563888 RAD21O60216 631 aa10.32□□□□□ -0.76
TCF4-221ENST00000563888 HSPA8P11142 646 aaKnown RBP10.32□□□□□ -0.76
TCF4-221ENST00000563888 CHRNA5P30532 468 aa10.32□□□□□ -0.76
TCF4-221ENST00000563888 SIK1P57059 783 aa10.32□□□□□ -0.76
TCF4-221ENST00000563888 RAPGEF4Q8WZA2 1011 aa10.32□□□□□ -0.76
TCF4-221ENST00000563888 ZFRQ96KR1 1074 aaKnown RBP10.32□□□□□ -0.76
TCF4-221ENST00000563888 N4BP2Q86UW6 1770 aaPredicted RBP10.31□□□□□ -0.76
TCF4-221ENST00000563888 C5P01031 1676 aa10.31□□□□□ -0.76
TCF4-221ENST00000563888 CNTNAP1P78357 1384 aa10.31□□□□□ -0.76
TCF4-221ENST00000563888 USP31Q70CQ4 1352 aa10.31□□□□□ -0.76
TCF4-221ENST00000563888 POTECB2RU33 542 aa10.31□□□□□ -0.76
TCF4-221ENST00000563888 ATP6V1AP38606 617 aa10.31□□□□□ -0.76
TCF4-221ENST00000563888 AMPHP49418 695 aa10.31□□□□□ -0.76
TCF4-221ENST00000563888 ITPK1Q13572 414 aa10.31□□□□□ -0.76
TCF4-221ENST00000563888 BANK1Q8NDB2 785 aa10.31□□□□□ -0.76
TCF4-221ENST00000563888 PIGBQ92521 554 aa10.31□□□□□ -0.76
TCF4-221ENST00000563888 NECTIN2Q92692 538 aa10.31□□□□□ -0.76
TCF4-221ENST00000563888 MEGF6O75095 1541 aa10.31□□□□□ -0.76
TCF4-221ENST00000563888 USP54Q70EL1 1684 aa10.31□□□□□ -0.76
TCF4-221ENST00000563888 QRICH2Q9H0J4 1663 aa10.31□□□□□ -0.76
TCF4-221ENST00000563888 C4BP0C0L5 1744 aa10.3□□□□□ -0.76
TCF4-221ENST00000563888 BHMG1C9JSJ3 638 aaPredicted RBP10.3□□□□□ -0.76
TCF4-221ENST00000563888 FDX1P10109 184 aa10.3□□□□□ -0.76
TCF4-221ENST00000563888 LMNB1P20700 586 aa10.3□□□□□ -0.76
TCF4-221ENST00000563888 FBLN1P23142 703 aa10.3□□□□□ -0.76
TCF4-221ENST00000563888 MCM6Q14566 821 aa10.3□□□□□ -0.76
TCF4-221ENST00000563888 NBPF6Q5VWK0 638 aa10.3□□□□□ -0.76
TCF4-221ENST00000563888 PPP2R2DQ66LE6 453 aa10.3□□□□□ -0.76
TCF4-221ENST00000563888 TMC1Q8TDI8 760 aa10.3□□□□□ -0.76
TCF4-221ENST00000563888 NBPF4Q96M43 638 aa10.3□□□□□ -0.76
TCF4-221ENST00000563888 RTCBQ9Y3I0 505 aaKnown RBP10.3□□□□□ -0.76
TCF4-221ENST00000563888 HOXA2O43364 376 aa10.29□□□□□ -0.76
TCF4-221ENST00000563888 TATP17735 454 aaPredicted RBP10.29□□□□□ -0.76
TCF4-221ENST00000563888 RFC4P35249 363 aa10.29□□□□□ -0.76
TCF4-221ENST00000563888 KMT5BQ4FZB7 885 aa10.29□□□□□ -0.76
TCF4-221ENST00000563888 LRCH3Q96II8 777 aa10.29□□□□□ -0.76
TCF4-221ENST00000563888 ZBTB3Q9H5J0 574 aa10.29□□□□□ -0.76
TCF4-221ENST00000563888 PCDHB15Q9Y5E8 787 aa10.29□□□□□ -0.76
TCF4-221ENST00000563888 SPDYE5A6NIY4 337 aa10.28□□□□□ -0.76
TCF4-221ENST00000563888 HRO43593 1189 aa10.28□□□□□ -0.76
TCF4-221ENST00000563888 CFHP08603 1231 aa10.28□□□□□ -0.76
TCF4-221ENST00000563888 GYS1P13807 737 aa10.28□□□□□ -0.76
TCF4-221ENST00000563888 HOXC9P31274 260 aa10.28□□□□□ -0.76
TCF4-221ENST00000563888 PRPF38BQ5VTL8 546 aaKnown RBP10.28□□□□□ -0.76
TCF4-221ENST00000563888 ASAP1Q9ULH1 1129 aa10.28□□□□□ -0.76
TCF4-221ENST00000563888 ZC3H4Q9UPT8 1303 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms