RNA–Protein interactions for RNA: ENST00000563840.1

SIRPB1-207, Transcript of signal regulatory protein beta 1, humanhuman

TSL 3

Gene SIRPB1, Length 583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1-207ENST00000563840 NCBP3Q53F19 620 aaKnown RBP11.85□□□□□ -0.51
SIRPB1-207ENST00000563840 ANKRD13DQ6ZTN6 518 aa11.85□□□□□ -0.51
SIRPB1-207ENST00000563840 PLBD2Q8NHP8 589 aa11.85□□□□□ -0.51
SIRPB1-207ENST00000563840 ATP5J2-PTCD1G3V325 749 aa11.84□□□□□ -0.51
SIRPB1-207ENST00000563840 PARP10Q53GL7 1025 aa11.84□□□□□ -0.51
SIRPB1-207ENST00000563840 PPP1R42Q7Z4L9 355 aa11.84□□□□□ -0.51
SIRPB1-207ENST00000563840 UTP14AQ9BVJ6 771 aaKnown RBP11.84□□□□□ -0.51
SIRPB1-207ENST00000563840 NMRK2Q9NPI5 230 aa11.84□□□□□ -0.51
SIRPB1-207ENST00000563840 HYPKQ9NX55 129 aa11.84□□□□□ -0.51
SIRPB1-207ENST00000563840 CACNA1SQ13698 1873 aa11.84□□□□□ -0.51
SIRPB1-207ENST00000563840 IL16Q14005 1332 aa11.84□□□□□ -0.51
SIRPB1-207ENST00000563840 LMNB1P20700 586 aa11.83□□□□□ -0.52
SIRPB1-207ENST00000563840 SLC10A5Q5PT55 438 aa11.83□□□□□ -0.52
SIRPB1-207ENST00000563840 ISCA1Q9BUE6 129 aa11.83□□□□□ -0.52
SIRPB1-207ENST00000563840 RIC1Q4ADV7 1423 aa11.83□□□□□ -0.52
SIRPB1-207ENST00000563840 SNED1Q8TER0 1413 aa11.83□□□□□ -0.52
SIRPB1-207ENST00000563840 FANCIQ9NVI1 1328 aa11.83□□□□□ -0.52
SIRPB1-207ENST00000563840 FER1L6Q2WGJ9 1857 aa11.83□□□□□ -0.52
SIRPB1-207ENST00000563840 ARFGEF2Q9Y6D5 1785 aa11.82□□□□□ -0.52
SIRPB1-207ENST00000563840 HCLS1P14317 486 aaPredicted RBP11.82□□□□□ -0.52
SIRPB1-207ENST00000563840 HOXA10P31260 410 aaPredicted RBP11.82□□□□□ -0.52
SIRPB1-207ENST00000563840 HSP90AB3PQ58FF7 597 aa11.82□□□□□ -0.52
SIRPB1-207ENST00000563840 ANKRD36CQ5JPF3 1778 aa11.82□□□□□ -0.52
SIRPB1-207ENST00000563840 TWISTNBQ3B726 338 aaPredicted RBP11.81□□□□□ -0.52
SIRPB1-207ENST00000563840 CCDC30Q5VVM6 783 aa11.81□□□□□ -0.52
SIRPB1-207ENST00000563840 G2E3Q7L622 706 aa11.81□□□□□ -0.52
SIRPB1-207ENST00000563840 WDR63Q8IWG1 891 aa11.81□□□□□ -0.52
SIRPB1-207ENST00000563840 TAOK3Q9H2K8 898 aa11.81□□□□□ -0.52
SIRPB1-207ENST00000563840 TRMT112Q9UI30 125 aaKnown RBP11.81□□□□□ -0.52
SIRPB1-207ENST00000563840 ZNF521Q96K83 1311 aa11.81□□□□□ -0.52
SIRPB1-207ENST00000563840 LTBP3Q9NS15 1303 aa11.81□□□□□ -0.52
SIRPB1-207ENST00000563840 ALDH1B1P30837 517 aa11.8□□□□□ -0.52
SIRPB1-207ENST00000563840 EXOSC9Q06265 439 aaKnown RBP11.8□□□□□ -0.52
SIRPB1-207ENST00000563840 FAM89AQ96GI7 184 aa11.8□□□□□ -0.52
SIRPB1-207ENST00000563840 NLRP3Q96P20 1036 aa11.8□□□□□ -0.52
SIRPB1-207ENST00000563840 CCDC88AQ3V6T2 1871 aa11.79□□□□□ -0.52
SIRPB1-207ENST00000563840 COL4A1P02462 1669 aa11.79□□□□□ -0.52
SIRPB1-207ENST00000563840 POTECB2RU33 542 aa11.79□□□□□ -0.52
SIRPB1-207ENST00000563840 VAMP4O75379 141 aa11.79□□□□□ -0.52
SIRPB1-207ENST00000563840 TRIM28Q13263 835 aaKnown RBP11.79□□□□□ -0.52
SIRPB1-207ENST00000563840 CCDC93Q567U6 631 aa11.79□□□□□ -0.52
SIRPB1-207ENST00000563840 RTL5Q5HYW3 569 aaPredicted RBP11.79□□□□□ -0.52
SIRPB1-207ENST00000563840 RIC3Q7Z5B4 369 aa11.79□□□□□ -0.52
SIRPB1-207ENST00000563840 JARID2Q92833 1246 aaPredicted RBP11.79□□□□□ -0.52
SIRPB1-207ENST00000563840 RPGRQ92834 1020 aaKnown RBP11.79□□□□□ -0.52
SIRPB1-207ENST00000563840 RBM17Q96I25 401 aaKnown RBP11.79□□□□□ -0.52
SIRPB1-207ENST00000563840 CRAMP1Q96RY5 1269 aa11.79□□□□□ -0.52
SIRPB1-207ENST00000563840 MYD88Q99836 296 aa11.79□□□□□ -0.52
SIRPB1-207ENST00000563840 RRAGCQ9HB90 399 aa11.79□□□□□ -0.52
SIRPB1-207ENST00000563840 ZNF277Q9NRM2 450 aaPredicted RBP11.79□□□□□ -0.52
SIRPB1-207ENST00000563840 ABCC4O15439 1325 aa11.79□□□□□ -0.52
SIRPB1-207ENST00000563840 SH3TC1Q8TE82 1336 aa11.79□□□□□ -0.52
SIRPB1-207ENST00000563840 TIAM2Q8IVF5 1701 aa11.78□□□□□ -0.52
SIRPB1-207ENST00000563840 LAMB2P55268 1798 aa11.78□□□□□ -0.52
SIRPB1-207ENST00000563840 GLTPD2A6NH11 291 aa11.78□□□□□ -0.52
SIRPB1-207ENST00000563840 FKBP4Q02790 459 aaKnown RBP eCLIP11.78□□□□□ -0.52
SIRPB1-207ENST00000563840 GOLGA2Q08379 1002 aa11.78□□□□□ -0.52
SIRPB1-207ENST00000563840 SOGA3Q5TF21 947 aa11.78□□□□□ -0.52
SIRPB1-207ENST00000563840 RNF123Q5XPI4 1314 aa11.78□□□□□ -0.52
SIRPB1-207ENST00000563840 COL4A5P29400 1685 aa11.78□□□□□ -0.52
SIRPB1-207ENST00000563840 DDX60Q8IY21 1712 aaKnown RBP11.77□□□□□ -0.52
SIRPB1-207ENST00000563840 PI4KAP2A4QPH2 592 aa11.77□□□□□ -0.53
SIRPB1-207ENST00000563840 PPEF1O14829 653 aaPredicted RBP11.77□□□□□ -0.53
SIRPB1-207ENST00000563840 SLC4A2P04920 1241 aa11.77□□□□□ -0.53
SIRPB1-207ENST00000563840 IGKV5-2P06315 115 aa11.77□□□□□ -0.53
SIRPB1-207ENST00000563840 PI4KAP1Q8N8J0 262 aa11.77□□□□□ -0.53
SIRPB1-207ENST00000563840 METTL22Q9BUU2 404 aaPredicted RBP11.77□□□□□ -0.53
SIRPB1-207ENST00000563840 MAP3K2Q9Y2U5 619 aa11.77□□□□□ -0.53
SIRPB1-207ENST00000563840 ZC3H4Q9UPT8 1303 aaKnown RBP11.77□□□□□ -0.53
SIRPB1-207ENST00000563840 CEP350Q5VT06 3117 aa11.77□□□□□ -0.53
SIRPB1-207ENST00000563840 KSR2Q6VAB6 950 aa11.76□□□□□ -0.53
SIRPB1-207ENST00000563840 RTKN2Q8IZC4 609 aa11.76□□□□□ -0.53
SIRPB1-207ENST00000563840 KDM2BQ8NHM5 1336 aa11.76□□□□□ -0.53
SIRPB1-207ENST00000563840 TAF1P21675 1872 aa11.75□□□□□ -0.53
SIRPB1-207ENST00000563840 IRS4O14654 1257 aaPredicted RBP11.75□□□□□ -0.53
SIRPB1-207ENST00000563840 DDNO94850 711 aaPredicted RBP11.75□□□□□ -0.53
SIRPB1-207ENST00000563840 CWF19L2Q2TBE0 894 aaKnown RBP11.75□□□□□ -0.53
SIRPB1-207ENST00000563840 ZBTB38Q8NAP3 1195 aaPredicted RBP11.75□□□□□ -0.53
SIRPB1-207ENST00000563840 CELF1Q92879 486 aaKnown RBP11.75□□□□□ -0.53
SIRPB1-207ENST00000563840 PSMD1Q99460 953 aa11.75□□□□□ -0.53
SIRPB1-207ENST00000563840 STK31Q9BXU1 1019 aa11.75□□□□□ -0.53
SIRPB1-207ENST00000563840 ATP6V0A2Q9Y487 856 aa11.75□□□□□ -0.53
SIRPB1-207ENST00000563840 DICER1Q9UPY3 1922 aaKnown RBP11.75□□□□□ -0.53
SIRPB1-207ENST00000563840 ZNF541Q9H0D2 1346 aa11.75□□□□□ -0.53
SIRPB1-207ENST00000563840 TOMM70O94826 608 aa11.74□□□□□ -0.53
SIRPB1-207ENST00000563840 IARSP41252 1262 aaKnown RBP11.74□□□□□ -0.53
SIRPB1-207ENST00000563840 FLIIQ13045 1269 aa11.74□□□□□ -0.53
SIRPB1-207ENST00000563840 GRAPQ13588 217 aa11.74□□□□□ -0.53
SIRPB1-207ENST00000563840 SF3B3Q15393 1217 aaKnown RBP11.74□□□□□ -0.53
SIRPB1-207ENST00000563840 CCDC191Q8NCU4 936 aa11.74□□□□□ -0.53
SIRPB1-207ENST00000563840 GRAPLQ8TC17 118 aaPredicted RBP11.74□□□□□ -0.53
SIRPB1-207ENST00000563840 CCER2I3L3R5 266 aa11.73□□□□□ -0.53
SIRPB1-207ENST00000563840 FZD9O00144 591 aa11.73□□□□□ -0.53
SIRPB1-207ENST00000563840 DDX58O95786 925 aaKnown RBP11.73□□□□□ -0.53
SIRPB1-207ENST00000563840 PCCAP05165 728 aaPredicted RBP11.73□□□□□ -0.53
SIRPB1-207ENST00000563840 CC2D2BQ6DHV5 1058 aa11.73□□□□□ -0.53
SIRPB1-207ENST00000563840 DDX46Q7L014 1031 aaKnown RBP11.73□□□□□ -0.53
SIRPB1-207ENST00000563840 SP8Q8IXZ3 490 aa11.73□□□□□ -0.53
SIRPB1-207ENST00000563840 CDCA7LQ96GN5 454 aa11.73□□□□□ -0.53
SIRPB1-207ENST00000563840 SEC31BQ9NQW1 1179 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms