RNA–Protein interactions for RNA: ENST00000563720.1

MAP1LC3B-204, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 3

Gene MAP1LC3B, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-204ENST00000563720 VEGFBP49765 207 aa22.75■■□□□ 1.23
MAP1LC3B-204ENST00000563720 KRT24Q2M2I5 525 aa22.75■■□□□ 1.23
MAP1LC3B-204ENST00000563720 PROSER3Q2NL68 480 aa22.75■■□□□ 1.23
MAP1LC3B-204ENST00000563720 CCDC184Q52MB2 194 aa22.75■■□□□ 1.23
MAP1LC3B-204ENST00000563720 ZBTB3Q9H5J0 574 aa22.75■■□□□ 1.23
MAP1LC3B-204ENST00000563720 CLEC11AQ9Y240 323 aa22.75■■□□□ 1.23
MAP1LC3B-204ENST00000563720 LAS1LQ9Y4W2 734 aaKnown RBP22.75■■□□□ 1.23
MAP1LC3B-204ENST00000563720 KLRG2A4D1S0 409 aaPredicted RBP22.74■■□□□ 1.23
MAP1LC3B-204ENST00000563720 APAF1O14727 1248 aa22.74■■□□□ 1.23
MAP1LC3B-204ENST00000563720 NPR1P16066 1061 aa22.74■■□□□ 1.23
MAP1LC3B-204ENST00000563720 FKBP4Q02790 459 aaKnown RBP eCLIP22.74■■□□□ 1.23
MAP1LC3B-204ENST00000563720 C7orf43Q8WVR3 580 aa22.74■■□□□ 1.23
MAP1LC3B-204ENST00000563720 HACL1Q9UJ83 578 aa22.74■■□□□ 1.23
MAP1LC3B-204ENST00000563720 ANXA1P04083 346 aa22.73■■□□□ 1.23
MAP1LC3B-204ENST00000563720 ZNF277Q9NRM2 450 aaPredicted RBP22.73■■□□□ 1.23
MAP1LC3B-204ENST00000563720 ZNF541Q9H0D2 1346 aa22.73■■□□□ 1.23
MAP1LC3B-204ENST00000563720 SCN4AP35499 1836 aa22.73■■□□□ 1.23
MAP1LC3B-204ENST00000563720 ITGBL1O95965 494 aaPredicted RBP22.72■■□□□ 1.23
MAP1LC3B-204ENST00000563720 CFAP44Q96MT7 982 aa22.72■■□□□ 1.23
MAP1LC3B-204ENST00000563720 UBN2Q6ZU65 1347 aa22.72■■□□□ 1.23
MAP1LC3B-204ENST00000563720 GPTP24298 496 aa22.71■■□□□ 1.23
MAP1LC3B-204ENST00000563720 EPHX2P34913 555 aa22.71■■□□□ 1.23
MAP1LC3B-204ENST00000563720 GIGYF2Q6Y7W6 1299 aaKnown RBP22.71■■□□□ 1.23
MAP1LC3B-204ENST00000563720 ZNF34Q8IZ26 560 aa22.71■■□□□ 1.23
MAP1LC3B-204ENST00000563720 NECTIN2Q92692 538 aa22.71■■□□□ 1.23
MAP1LC3B-204ENST00000563720 ABCC12Q96J65 1359 aa22.71■■□□□ 1.23
MAP1LC3B-204ENST00000563720 IBTKQ9P2D0 1353 aaPredicted RBP22.71■■□□□ 1.23
MAP1LC3B-204ENST00000563720 RTKN2Q8IZC4 609 aa22.7■■□□□ 1.22
MAP1LC3B-204ENST00000563720 NYXQ9GZU5 481 aa22.7■■□□□ 1.22
MAP1LC3B-204ENST00000563720 ZNF853P0CG23 659 aa22.69■■□□□ 1.22
MAP1LC3B-204ENST00000563720 GTF2E1P29083 439 aaPredicted RBP22.69■■□□□ 1.22
MAP1LC3B-204ENST00000563720 LBX1P52954 281 aa22.69■■□□□ 1.22
MAP1LC3B-204ENST00000563720 PNMA8AQ86V59 439 aaPredicted RBP22.69■■□□□ 1.22
MAP1LC3B-204ENST00000563720 NUTM1Q86Y26 1132 aa22.69■■□□□ 1.22
MAP1LC3B-204ENST00000563720 MBIPQ9NS73 344 aa22.69■■□□□ 1.22
MAP1LC3B-204ENST00000563720 WBP1LQ9NX94 342 aa22.69■■□□□ 1.22
MAP1LC3B-204ENST00000563720 LAMB2P55268 1798 aa22.68■■□□□ 1.22
MAP1LC3B-204ENST00000563720 RIC1Q4ADV7 1423 aa22.68■■□□□ 1.22
MAP1LC3B-204ENST00000563720 RNF123Q5XPI4 1314 aa22.68■■□□□ 1.22
MAP1LC3B-204ENST00000563720 SUSD4Q5VX71 490 aa22.68■■□□□ 1.22
MAP1LC3B-204ENST00000563720 OLFM4Q6UX06 510 aa22.68■■□□□ 1.22
MAP1LC3B-204ENST00000563720 CNTROBQ8N137 903 aa22.68■■□□□ 1.22
MAP1LC3B-204ENST00000563720 DDX21Q9NR30 783 aaKnown RBP eCLIP22.68■■□□□ 1.22
MAP1LC3B-204ENST00000563720 HOXB7P09629 217 aa22.67■■□□□ 1.22
MAP1LC3B-204ENST00000563720 DEFB115Q30KQ5 88 aa22.67■■□□□ 1.22
MAP1LC3B-204ENST00000563720 COPS6Q7L5N1 327 aa22.67■■□□□ 1.22
MAP1LC3B-204ENST00000563720 ALDH1B1P30837 517 aa22.66■■□□□ 1.22
MAP1LC3B-204ENST00000563720 IARSP41252 1262 aaKnown RBP22.66■■□□□ 1.22
MAP1LC3B-204ENST00000563720 MAP1SQ66K74 1059 aaPredicted RBP22.66■■□□□ 1.22
MAP1LC3B-204ENST00000563720 SYNE4Q8N205 404 aa22.66■■□□□ 1.22
MAP1LC3B-204ENST00000563720 XAGE3Q8WTP9 111 aa22.66■■□□□ 1.22
MAP1LC3B-204ENST00000563720 CHPF2Q9P2E5 772 aa22.66■■□□□ 1.22
MAP1LC3B-204ENST00000563720 RASSF10A6NK89 507 aa22.65■■□□□ 1.22
MAP1LC3B-204ENST00000563720 NTSR2O95665 410 aa22.65■■□□□ 1.22
MAP1LC3B-204ENST00000563720 CRY2Q49AN0 593 aa22.65■■□□□ 1.22
MAP1LC3B-204ENST00000563720 HDGFL1Q5TGJ6 251 aa22.65■■□□□ 1.22
MAP1LC3B-204ENST00000563720 IFT57Q9NWB7 429 aa22.65■■□□□ 1.22
MAP1LC3B-204ENST00000563720 FZD9O00144 591 aa22.64■■□□□ 1.21
MAP1LC3B-204ENST00000563720 AIMP1Q12904 312 aaKnown RBP22.64■■□□□ 1.21
MAP1LC3B-204ENST00000563720 PARP10Q53GL7 1025 aa22.64■■□□□ 1.21
MAP1LC3B-204ENST00000563720 DUSP27Q5VZP5 1158 aa22.64■■□□□ 1.21
MAP1LC3B-204ENST00000563720 GPC2Q8N158 579 aa22.64■■□□□ 1.21
MAP1LC3B-204ENST00000563720 JDP2Q8WYK2 163 aa22.64■■□□□ 1.21
MAP1LC3B-204ENST00000563720 ABT1Q9ULW3 272 aaKnown RBP22.64■■□□□ 1.21
MAP1LC3B-204ENST00000563720 GNAI1P63096 354 aa22.63■■□□□ 1.21
MAP1LC3B-204ENST00000563720 MAP2K1Q02750 393 aaPredicted RBP22.63■■□□□ 1.21
MAP1LC3B-204ENST00000563720 CALD1Q05682 793 aaKnown RBP22.63■■□□□ 1.21
MAP1LC3B-204ENST00000563720 WDR33Q9C0J8 1336 aaKnown RBP22.62■■□□□ 1.21
MAP1LC3B-204ENST00000563720 ANP32CO43423 234 aa22.62■■□□□ 1.21
MAP1LC3B-204ENST00000563720 HSPA8P11142 646 aaKnown RBP22.62■■□□□ 1.21
MAP1LC3B-204ENST00000563720 PPP1R42Q7Z4L9 355 aa22.62■■□□□ 1.21
MAP1LC3B-204ENST00000563720 ADAMTSL1Q8N6G6 1762 aa22.61■■□□□ 1.21
MAP1LC3B-204ENST00000563720 EIF6P56537 245 aaKnown RBP22.61■■□□□ 1.21
MAP1LC3B-204ENST00000563720 DBF4Q9UBU7 674 aaPredicted RBP22.61■■□□□ 1.21
MAP1LC3B-204ENST00000563720 GJA3Q9Y6H8 435 aa22.61■■□□□ 1.21
MAP1LC3B-204ENST00000563720 HOXA10P31260 410 aaPredicted RBP22.6■■□□□ 1.21
MAP1LC3B-204ENST00000563720 HSP90AB3PQ58FF7 597 aa22.6■■□□□ 1.21
MAP1LC3B-204ENST00000563720 PSMD1Q99460 953 aa22.6■■□□□ 1.21
MAP1LC3B-204ENST00000563720 UTP14AQ9BVJ6 771 aaKnown RBP22.6■■□□□ 1.21
MAP1LC3B-204ENST00000563720 MRS2Q9HD23 443 aa22.6■■□□□ 1.21
MAP1LC3B-204ENST00000563720 DDX60Q8IY21 1712 aaKnown RBP22.6■■□□□ 1.21
MAP1LC3B-204ENST00000563720 SNED1Q8TER0 1413 aa22.59■■□□□ 1.21
MAP1LC3B-204ENST00000563720 LMOD1P29536 600 aaPredicted RBP22.59■■□□□ 1.21
MAP1LC3B-204ENST00000563720 TCIRG1Q13488 830 aa22.59■■□□□ 1.21
MAP1LC3B-204ENST00000563720 C3orf67Q6ZVT6 689 aa22.59■■□□□ 1.21
MAP1LC3B-204ENST00000563720 NLRP10Q86W26 655 aa22.59■■□□□ 1.21
MAP1LC3B-204ENST00000563720 ABHD8Q96I13 439 aa22.59■■□□□ 1.21
MAP1LC3B-204ENST00000563720 TAF1P21675 1872 aa22.58■■□□□ 1.21
MAP1LC3B-204ENST00000563720 SLC10A5Q5PT55 438 aa22.58■■□□□ 1.21
MAP1LC3B-204ENST00000563720 PAXIP1Q6ZW49 1069 aaPredicted RBP22.58■■□□□ 1.21
MAP1LC3B-204ENST00000563720 RPGRQ92834 1020 aaKnown RBP22.58■■□□□ 1.21
MAP1LC3B-204ENST00000563720 CCDC27Q2M243 656 aa22.57■■□□□ 1.2
MAP1LC3B-204ENST00000563720 CC2D2BQ6DHV5 1058 aa22.57■■□□□ 1.2
MAP1LC3B-204ENST00000563720 PLBD2Q8NHP8 589 aa22.57■■□□□ 1.2
MAP1LC3B-204ENST00000563720 HYPKQ9NX55 129 aa22.57■■□□□ 1.2
MAP1LC3B-204ENST00000563720 ELL2O00472 640 aaPredicted RBP22.56■■□□□ 1.2
MAP1LC3B-204ENST00000563720 ANKRD13DQ6ZTN6 518 aa22.56■■□□□ 1.2
MAP1LC3B-204ENST00000563720 C8orf58Q8NAV2 365 aa22.56■■□□□ 1.2
MAP1LC3B-204ENST00000563720 BEGAINQ9BUH8 593 aa22.56■■□□□ 1.2
MAP1LC3B-204ENST00000563720 GRM1Q13255 1194 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms