RNA–Protein interactions for RNA: ENST00000563716.5

DUX4-201, Transcript of double homeobox 4, humanhuman

TSL 5

Gene DUX4, Length 285 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4-201ENST00000563716 KRT24Q2M2I5 525 aa12.89□□□□□ -0.35
DUX4-201ENST00000563716 TAF1DQ9H5J8 278 aaPredicted RBP12.89□□□□□ -0.35
DUX4-201ENST00000563716 TSPYL4Q9UJ04 414 aa12.89□□□□□ -0.35
DUX4-201ENST00000563716 RNF123Q5XPI4 1314 aa12.88□□□□□ -0.35
DUX4-201ENST00000563716 FZD9O00144 591 aa12.88□□□□□ -0.35
DUX4-201ENST00000563716 HOXA10P31260 410 aaPredicted RBP12.88□□□□□ -0.35
DUX4-201ENST00000563716 IARSP41252 1262 aaKnown RBP12.88□□□□□ -0.35
DUX4-201ENST00000563716 TMPOP42166 694 aaKnown RBP12.88□□□□□ -0.35
DUX4-201ENST00000563716 RIPK4P57078 832 aa12.88□□□□□ -0.35
DUX4-201ENST00000563716 GIGYF2Q6Y7W6 1299 aaKnown RBP12.88□□□□□ -0.35
DUX4-201ENST00000563716 SYNE4Q8N205 404 aa12.88□□□□□ -0.35
DUX4-201ENST00000563716 NYXQ9GZU5 481 aa12.88□□□□□ -0.35
DUX4-201ENST00000563716 SPEF2Q9C093 1822 aa12.88□□□□□ -0.35
DUX4-201ENST00000563716 GTF2E1P29083 439 aaPredicted RBP12.87□□□□□ -0.35
DUX4-201ENST00000563716 ALDH1B1P30837 517 aa12.87□□□□□ -0.35
DUX4-201ENST00000563716 CCDC146Q8IYE0 955 aa12.87□□□□□ -0.35
DUX4-201ENST00000563716 RTKN2Q8IZC4 609 aa12.87□□□□□ -0.35
DUX4-201ENST00000563716 PSMD1Q99460 953 aa12.87□□□□□ -0.35
DUX4-201ENST00000563716 SCN9AQ15858 1988 aa12.87□□□□□ -0.35
DUX4-201ENST00000563716 PSME4Q14997 1843 aa12.86□□□□□ -0.35
DUX4-201ENST00000563716 HSPA1AP0DMV8 641 aaKnown RBP12.86□□□□□ -0.35
DUX4-201ENST00000563716 HSPA1BP0DMV9 641 aaKnown RBP12.86□□□□□ -0.35
DUX4-201ENST00000563716 EIF2S2P20042 333 aaKnown RBP12.86□□□□□ -0.35
DUX4-201ENST00000563716 RALBP1Q15311 655 aa12.86□□□□□ -0.35
DUX4-201ENST00000563716 LDHDQ86WU2 507 aa12.86□□□□□ -0.35
DUX4-201ENST00000563716 NECTIN2Q92692 538 aa12.86□□□□□ -0.35
DUX4-201ENST00000563716 RPGRQ92834 1020 aaKnown RBP12.86□□□□□ -0.35
DUX4-201ENST00000563716 CREBZFQ9NS37 354 aa12.86□□□□□ -0.35
DUX4-201ENST00000563716 MYH3P11055 1940 aa12.86□□□□□ -0.35
DUX4-201ENST00000563716 MYBBP1AQ9BQG0 1328 aaKnown RBP12.86□□□□□ -0.35
DUX4-201ENST00000563716 POLR2AP24928 1970 aaKnown RBP12.85□□□□□ -0.35
DUX4-201ENST00000563716 CNTNAP1P78357 1384 aa12.85□□□□□ -0.35
DUX4-201ENST00000563716 IQCA1LA6NCM1 817 aa12.85□□□□□ -0.35
DUX4-201ENST00000563716 ITGBL1O95965 494 aaPredicted RBP12.85□□□□□ -0.35
DUX4-201ENST00000563716 MKRN1Q9UHC7 482 aaKnown RBP12.85□□□□□ -0.35
DUX4-201ENST00000563716 TRIM35Q9UPQ4 493 aa12.85□□□□□ -0.35
DUX4-201ENST00000563716 ZNF646O15015 1829 aaPredicted RBP12.85□□□□□ -0.35
DUX4-201ENST00000563716 ABCC4O15439 1325 aa12.85□□□□□ -0.35
DUX4-201ENST00000563716 TCERG1O14776 1098 aaKnown RBP12.84□□□□□ -0.35
DUX4-201ENST00000563716 PPEF1O14829 653 aaPredicted RBP12.84□□□□□ -0.35
DUX4-201ENST00000563716 EPHX2P34913 555 aa12.84□□□□□ -0.35
DUX4-201ENST00000563716 DDX10Q13206 875 aaKnown RBP12.84□□□□□ -0.35
DUX4-201ENST00000563716 EAPPQ56P03 285 aaPredicted RBP12.84□□□□□ -0.35
DUX4-201ENST00000563716 ZNF428Q96B54 188 aa12.84□□□□□ -0.35
DUX4-201ENST00000563716 CRAMP1Q96RY5 1269 aa12.84□□□□□ -0.35
DUX4-201ENST00000563716 HACL1Q9UJ83 578 aa12.84□□□□□ -0.35
DUX4-201ENST00000563716 SCNN1DP51172 638 aa12.83□□□□□ -0.36
DUX4-201ENST00000563716 NEUROD2Q15784 382 aa12.83□□□□□ -0.36
DUX4-201ENST00000563716 PARP10Q53GL7 1025 aa12.83□□□□□ -0.36
DUX4-201ENST00000563716 NLRP10Q86W26 655 aa12.83□□□□□ -0.36
DUX4-201ENST00000563716 GPC2Q8N158 579 aa12.83□□□□□ -0.36
DUX4-201ENST00000563716 XAGE3Q8WTP9 111 aa12.83□□□□□ -0.36
DUX4-201ENST00000563716 PNNQ9H307 717 aaKnown RBP12.83□□□□□ -0.36
DUX4-201ENST00000563716 CHL1O00533 1208 aa12.82□□□□□ -0.36
DUX4-201ENST00000563716 MAP1SQ66K74 1059 aaPredicted RBP12.82□□□□□ -0.36
DUX4-201ENST00000563716 COPS6Q7L5N1 327 aa12.82□□□□□ -0.36
DUX4-201ENST00000563716 RBM17Q96I25 401 aaKnown RBP12.82□□□□□ -0.36
DUX4-201ENST00000563716 BABAM1Q9NWV8 329 aa12.82□□□□□ -0.36
DUX4-201ENST00000563716 CHPF2Q9P2E5 772 aa12.82□□□□□ -0.36
DUX4-201ENST00000563716 HCLS1P14317 486 aaPredicted RBP12.81□□□□□ -0.36
DUX4-201ENST00000563716 FMR1Q06787 632 aaKnown RBP eCLIP12.81□□□□□ -0.36
DUX4-201ENST00000563716 LMOD3Q0VAK6 560 aa12.81□□□□□ -0.36
DUX4-201ENST00000563716 AIMP1Q12904 312 aaKnown RBP12.81□□□□□ -0.36
DUX4-201ENST00000563716 SLC10A5Q5PT55 438 aa12.81□□□□□ -0.36
DUX4-201ENST00000563716 CC2D2BQ6DHV5 1058 aa12.81□□□□□ -0.36
DUX4-201ENST00000563716 PPP1R42Q7Z4L9 355 aa12.81□□□□□ -0.36
DUX4-201ENST00000563716 UTP14AQ9BVJ6 771 aaKnown RBP12.81□□□□□ -0.36
DUX4-201ENST00000563716 GJA3Q9Y6H8 435 aa12.81□□□□□ -0.36
DUX4-201ENST00000563716 EPS15P42566 896 aa12.8□□□□□ -0.36
DUX4-201ENST00000563716 AOC3Q16853 763 aa12.8□□□□□ -0.36
DUX4-201ENST00000563716 LARGE2Q8N3Y3 721 aa12.8□□□□□ -0.36
DUX4-201ENST00000563716 JDP2Q8WYK2 163 aa12.8□□□□□ -0.36
DUX4-201ENST00000563716 RUNDC1Q96C34 613 aa12.8□□□□□ -0.36
DUX4-201ENST00000563716 DDX21Q9NR30 783 aaKnown RBP eCLIP12.8□□□□□ -0.36
DUX4-201ENST00000563716 ADAMTS8Q9UP79 889 aa12.8□□□□□ -0.36
DUX4-201ENST00000563716 ATP6V0A2Q9Y487 856 aa12.8□□□□□ -0.36
DUX4-201ENST00000563716 PPIP5K2O43314 1243 aa12.79□□□□□ -0.36
DUX4-201ENST00000563716 VEGFBP49765 207 aa12.79□□□□□ -0.36
DUX4-201ENST00000563716 TNS4Q8IZW8 715 aa12.79□□□□□ -0.36
DUX4-201ENST00000563716 NLRP3Q96P20 1036 aa12.79□□□□□ -0.36
DUX4-201ENST00000563716 A0A1B0GUL6 1792 aa12.79□□□□□ -0.36
DUX4-201ENST00000563716 TMEM88BA6NKF7 163 aa12.78□□□□□ -0.36
DUX4-201ENST00000563716 FOXN1O15353 648 aa12.78□□□□□ -0.36
DUX4-201ENST00000563716 CAPN15O75808 1086 aa12.78□□□□□ -0.36
DUX4-201ENST00000563716 EIF6P56537 245 aaKnown RBP12.78□□□□□ -0.36
DUX4-201ENST00000563716 TCIRG1Q13488 830 aa12.78□□□□□ -0.36
DUX4-201ENST00000563716 CNTROBQ8N137 903 aa12.78□□□□□ -0.36
DUX4-201ENST00000563716 RTFDC1Q9BY42 306 aaPredicted RBP12.78□□□□□ -0.36
DUX4-201ENST00000563716 CLEC11AQ9Y240 323 aa12.78□□□□□ -0.36
DUX4-201ENST00000563716 LAS1LQ9Y4W2 734 aaKnown RBP12.78□□□□□ -0.36
DUX4-201ENST00000563716 HDGFL1Q5TGJ6 251 aa12.77□□□□□ -0.37
DUX4-201ENST00000563716 PNMA8AQ86V59 439 aaPredicted RBP12.77□□□□□ -0.37
DUX4-201ENST00000563716 NIM1KQ8IY84 436 aa12.77□□□□□ -0.37
DUX4-201ENST00000563716 PRKRIP1Q9H875 184 aaPredicted RBP12.77□□□□□ -0.37
DUX4-201ENST00000563716 MBIPQ9NS73 344 aa12.77□□□□□ -0.37
DUX4-201ENST00000563716 TRMT112Q9UI30 125 aaKnown RBP12.77□□□□□ -0.37
DUX4-201ENST00000563716 SH3TC1Q8TE82 1336 aa12.77□□□□□ -0.37
DUX4-201ENST00000563716 CACNA1FO60840 1977 aa12.76□□□□□ -0.37
DUX4-201ENST00000563716 RASSF10A6NK89 507 aa12.76□□□□□ -0.37
DUX4-201ENST00000563716 TRAF5O00463 557 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms