RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 ARHGAP27Q6ZUM4 889 aa26.07■■□□□ 1.76
CMTM3-206ENST00000563672 RNF123Q5XPI4 1314 aa26.07■■□□□ 1.76
CMTM3-206ENST00000563672 COL11A2P13942 1736 aaPredicted RBP26.06■■□□□ 1.76
CMTM3-206ENST00000563672 NPR1P16066 1061 aa26.06■■□□□ 1.76
CMTM3-206ENST00000563672 SLFN5Q08AF3 891 aa26.06■■□□□ 1.76
CMTM3-206ENST00000563672 CRY2Q49AN0 593 aa26.06■■□□□ 1.76
CMTM3-206ENST00000563672 SLC10A5Q5PT55 438 aa26.06■■□□□ 1.76
CMTM3-206ENST00000563672 CNKSR1Q969H4 720 aa26.06■■□□□ 1.76
CMTM3-206ENST00000563672 ARFGEF1Q9Y6D6 1849 aa26.05■■□□□ 1.76
CMTM3-206ENST00000563672 DDX58O95786 925 aaKnown RBP26.05■■□□□ 1.76
CMTM3-206ENST00000563672 G2E3Q7L622 706 aa26.05■■□□□ 1.76
CMTM3-206ENST00000563672 ATP5J2-PTCD1G3V325 749 aa26.04■■□□□ 1.76
CMTM3-206ENST00000563672 ANKRD36CQ5JPF3 1778 aa26.03■■□□□ 1.76
CMTM3-206ENST00000563672 KSR2Q6VAB6 950 aa26.03■■□□□ 1.76
CMTM3-206ENST00000563672 TRMT112Q9UI30 125 aaKnown RBP26.03■■□□□ 1.76
CMTM3-206ENST00000563672 CDCA7LQ96GN5 454 aa26.02■■□□□ 1.76
CMTM3-206ENST00000563672 METTL22Q9BUU2 404 aaPredicted RBP26.02■■□□□ 1.76
CMTM3-206ENST00000563672 PI4KAP2A4QPH2 592 aa26.01■■□□□ 1.75
CMTM3-206ENST00000563672 PRPF40BQ6NWY9 871 aaKnown RBP26.01■■□□□ 1.75
CMTM3-206ENST00000563672 TRMT2AQ8IZ69 625 aaKnown RBP26.01■■□□□ 1.75
CMTM3-206ENST00000563672 SYNE4Q8N205 404 aa26.01■■□□□ 1.75
CMTM3-206ENST00000563672 PI4KAP1Q8N8J0 262 aa26.01■■□□□ 1.75
CMTM3-206ENST00000563672 MAP3K2Q9Y2U5 619 aa26.01■■□□□ 1.75
CMTM3-206ENST00000563672 TNRC6CQ9HCJ0 1690 aaKnown RBP26■■□□□ 1.75
CMTM3-206ENST00000563672 ADCY9O60503 1353 aa26■■□□□ 1.75
CMTM3-206ENST00000563672 SH3TC1Q8TE82 1336 aa26■■□□□ 1.75
CMTM3-206ENST00000563672 HOXA10P31260 410 aaPredicted RBP26■■□□□ 1.75
CMTM3-206ENST00000563672 FLIIQ13045 1269 aa26■■□□□ 1.75
CMTM3-206ENST00000563672 C3orf67Q6ZVT6 689 aa26■■□□□ 1.75
CMTM3-206ENST00000563672 NLRP3Q96P20 1036 aa26■■□□□ 1.75
CMTM3-206ENST00000563672 MYD88Q99836 296 aa26■■□□□ 1.75
CMTM3-206ENST00000563672 ARFGEF2Q9Y6D5 1785 aa26■■□□□ 1.75
CMTM3-206ENST00000563672 C21orf2O43822 256 aa25.99■■□□□ 1.75
CMTM3-206ENST00000563672 ALDH1B1P30837 517 aa25.99■■□□□ 1.75
CMTM3-206ENST00000563672 C7orf43Q8WVR3 580 aa25.99■■□□□ 1.75
CMTM3-206ENST00000563672 ZNF784Q8NCA9 323 aaPredicted RBP25.98■■□□□ 1.75
CMTM3-206ENST00000563672 CCDC191Q8NCU4 936 aa25.98■■□□□ 1.75
CMTM3-206ENST00000563672 ZNF428Q96B54 188 aa25.98■■□□□ 1.75
CMTM3-206ENST00000563672 HCLS1P14317 486 aaPredicted RBP25.97■■□□□ 1.75
CMTM3-206ENST00000563672 FAM89AQ96GI7 184 aa25.97■■□□□ 1.75
CMTM3-206ENST00000563672 ZNF219Q9P2Y4 722 aaPredicted RBP25.97■■□□□ 1.75
CMTM3-206ENST00000563672 RPGRQ92834 1020 aaKnown RBP25.96■■□□□ 1.75
CMTM3-206ENST00000563672 SLX4Q8IY92 1834 aa25.95■■□□□ 1.75
CMTM3-206ENST00000563672 IGKV5-2P06315 115 aa25.95■■□□□ 1.74
CMTM3-206ENST00000563672 CRAMP1Q96RY5 1269 aa25.95■■□□□ 1.74
CMTM3-206ENST00000563672 NFKBIEO00221 500 aa25.94■■□□□ 1.74
CMTM3-206ENST00000563672 FKBP5Q13451 457 aaPredicted RBP25.94■■□□□ 1.74
CMTM3-206ENST00000563672 SOGA3Q5TF21 947 aa25.94■■□□□ 1.74
CMTM3-206ENST00000563672 ZBTB38Q8NAP3 1195 aaPredicted RBP25.94■■□□□ 1.74
CMTM3-206ENST00000563672 RBM17Q96I25 401 aaKnown RBP25.94■■□□□ 1.74
CMTM3-206ENST00000563672 CWC25Q9NXE8 425 aaPredicted RBP25.94■■□□□ 1.74
CMTM3-206ENST00000563672 RASSF7Q02833 373 aa25.93■■□□□ 1.74
CMTM3-206ENST00000563672 C9orf131Q5VYM1 1079 aa25.93■■□□□ 1.74
CMTM3-206ENST00000563672 PRELPP51888 382 aa25.92■■□□□ 1.74
CMTM3-206ENST00000563672 NEXNQ0ZGT2 675 aa25.92■■□□□ 1.74
CMTM3-206ENST00000563672 CACNA1FO60840 1977 aa25.91■■□□□ 1.74
CMTM3-206ENST00000563672 IRS4O14654 1257 aaPredicted RBP25.91■■□□□ 1.74
CMTM3-206ENST00000563672 PCCAP05165 728 aaPredicted RBP25.91■■□□□ 1.74
CMTM3-206ENST00000563672 RTL5Q5HYW3 569 aaPredicted RBP25.91■■□□□ 1.74
CMTM3-206ENST00000563672 DNAAF4Q8WXU2 420 aa25.91■■□□□ 1.74
CMTM3-206ENST00000563672 LTBP3Q9NS15 1303 aa25.89■■□□□ 1.74
CMTM3-206ENST00000563672 NEURL1BA8MQ27 555 aa25.89■■□□□ 1.74
CMTM3-206ENST00000563672 LMNB1P20700 586 aa25.89■■□□□ 1.74
CMTM3-206ENST00000563672 HNRNPUQ00839 825 aaKnown RBP eCLIP25.89■■□□□ 1.74
CMTM3-206ENST00000563672 SF3B3Q15393 1217 aaKnown RBP25.89■■□□□ 1.74
CMTM3-206ENST00000563672 CWF19L2Q2TBE0 894 aaKnown RBP25.89■■□□□ 1.74
CMTM3-206ENST00000563672 CCDC93Q567U6 631 aa25.89■■□□□ 1.74
CMTM3-206ENST00000563672 RNF181Q9P0P0 153 aa25.89■■□□□ 1.74
CMTM3-206ENST00000563672 OLFM4Q6UX06 510 aa25.88■■□□□ 1.73
CMTM3-206ENST00000563672 MRPL50Q8N5N7 158 aaKnown RBP25.88■■□□□ 1.73
CMTM3-206ENST00000563672 ABCC4O15439 1325 aa25.88■■□□□ 1.73
CMTM3-206ENST00000563672 SSH1Q8WYL5 1049 aa25.87■■□□□ 1.73
CMTM3-206ENST00000563672 TAOK3Q9H2K8 898 aa25.87■■□□□ 1.73
CMTM3-206ENST00000563672 F6X3S4 739 aa25.86■■□□□ 1.73
CMTM3-206ENST00000563672 CT47B1P0C2W7 299 aaPredicted RBP25.86■■□□□ 1.73
CMTM3-206ENST00000563672 HSP90B1P14625 803 aaKnown RBP25.86■■□□□ 1.73
CMTM3-206ENST00000563672 CC2D2BQ6DHV5 1058 aa25.86■■□□□ 1.73
CMTM3-206ENST00000563672 DDX46Q7L014 1031 aaKnown RBP25.86■■□□□ 1.73
CMTM3-206ENST00000563672 RTKN2Q8IZC4 609 aa25.86■■□□□ 1.73
CMTM3-206ENST00000563672 LINS1Q8NG48 757 aa25.86■■□□□ 1.73
CMTM3-206ENST00000563672 JARID2Q92833 1246 aaPredicted RBP25.86■■□□□ 1.73
CMTM3-206ENST00000563672 BBOX1O75936 387 aa25.85■■□□□ 1.73
CMTM3-206ENST00000563672 SNED1Q8TER0 1413 aa25.85■■□□□ 1.73
CMTM3-206ENST00000563672 DDX60Q8IY21 1712 aaKnown RBP25.85■■□□□ 1.73
CMTM3-206ENST00000563672 CACNA1SQ13698 1873 aa25.85■■□□□ 1.73
CMTM3-206ENST00000563672 FER1L6Q2WGJ9 1857 aa25.85■■□□□ 1.73
CMTM3-206ENST00000563672 CDHR2Q9BYE9 1310 aa25.85■■□□□ 1.73
CMTM3-206ENST00000563672 H7C1W4 665 aa25.84■■□□□ 1.73
CMTM3-206ENST00000563672 PPEF1O14829 653 aaPredicted RBP25.84■■□□□ 1.73
CMTM3-206ENST00000563672 SBF1O95248 1867 aa25.84■■□□□ 1.73
CMTM3-206ENST00000563672 GCKRQ14397 625 aa25.84■■□□□ 1.73
CMTM3-206ENST00000563672 ALDH1L2Q3SY69 923 aa25.84■■□□□ 1.73
CMTM3-206ENST00000563672 LAMB2P55268 1798 aa25.83■■□□□ 1.73
CMTM3-206ENST00000563672 PDE8AO60658 829 aa25.83■■□□□ 1.73
CMTM3-206ENST00000563672 FKBP4Q02790 459 aaKnown RBP eCLIP25.83■■□□□ 1.73
CMTM3-206ENST00000563672 GRAPQ13588 217 aa25.83■■□□□ 1.73
CMTM3-206ENST00000563672 BEND3Q5T5X7 828 aa25.83■■□□□ 1.73
CMTM3-206ENST00000563672 GRAPLQ8TC17 118 aaPredicted RBP25.83■■□□□ 1.73
CMTM3-206ENST00000563672 ATP6V0A2Q9Y487 856 aa25.82■■□□□ 1.72
CMTM3-206ENST00000563672 GRIPAP1Q4V328 841 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms