RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 ELOA3DA6NLF2 546 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P33-201ENST00000563485 TGFBR3LH3BV60 316 aa7.06□□□□□ -1.28
HMGB1P33-201ENST00000563485 ITGB2P05107 769 aa7.06□□□□□ -1.28
HMGB1P33-201ENST00000563485 PLA2G4EQ3MJ16 856 aa7.06□□□□□ -1.28
HMGB1P33-201ENST00000563485 ELOA3BQ3SY89 546 aa7.06□□□□□ -1.28
HMGB1P33-201ENST00000563485 IER5Q5VY09 327 aa7.06□□□□□ -1.28
HMGB1P33-201ENST00000563485 ELOA3Q8NG57 546 aa7.06□□□□□ -1.28
HMGB1P33-201ENST00000563485 ADARB2-AS1A8MUL3 147 aa7.05□□□□□ -1.28
HMGB1P33-201ENST00000563485 GNB5O14775 395 aa7.05□□□□□ -1.28
HMGB1P33-201ENST00000563485 DGKZQ13574 1117 aa7.05□□□□□ -1.28
HMGB1P33-201ENST00000563485 BHMTQ93088 406 aa7.05□□□□□ -1.28
HMGB1P33-201ENST00000563485 VTI1AQ96AJ9 217 aa7.05□□□□□ -1.28
HMGB1P33-201ENST00000563485 PRIMPOLQ96LW4 560 aa7.05□□□□□ -1.28
HMGB1P33-201ENST00000563485 DMGDHQ9UI17 866 aaKnown RBP7.05□□□□□ -1.28
HMGB1P33-201ENST00000563485 ACIN1Q9UKV3 1341 aaKnown RBP7.04□□□□□ -1.28
HMGB1P33-201ENST00000563485 KRBA1A5PL33 1030 aa7.04□□□□□ -1.28
HMGB1P33-201ENST00000563485 PRMT3O60678 531 aa7.04□□□□□ -1.28
HMGB1P33-201ENST00000563485 FKBP5Q13451 457 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P33-201ENST00000563485 ELOAQ14241 798 aaKnown RBP7.04□□□□□ -1.28
HMGB1P33-201ENST00000563485 TNFRSF25Q93038 417 aa7.04□□□□□ -1.28
HMGB1P33-201ENST00000563485 CCDC97Q96F63 343 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P33-201ENST00000563485 ALAS2P22557 587 aa7.03□□□□□ -1.28
HMGB1P33-201ENST00000563485 GRNP28799 593 aaKnown RBP7.03□□□□□ -1.28
HMGB1P33-201ENST00000563485 ADH7P40394 386 aa7.03□□□□□ -1.28
HMGB1P33-201ENST00000563485 FAM69CQ0P6D2 419 aa7.03□□□□□ -1.28
HMGB1P33-201ENST00000563485 NEUROD1Q13562 356 aa7.03□□□□□ -1.28
HMGB1P33-201ENST00000563485 SWI5Q1ZZU3 235 aa7.03□□□□□ -1.28
HMGB1P33-201ENST00000563485 PIK3R2O00459 728 aa7.02□□□□□ -1.29
HMGB1P33-201ENST00000563485 ATG7O95352 703 aa7.02□□□□□ -1.29
HMGB1P33-201ENST00000563485 IGHA1P01876 353 aa7.02□□□□□ -1.29
HMGB1P33-201ENST00000563485 IDH3AP50213 366 aa7.02□□□□□ -1.29
HMGB1P33-201ENST00000563485 OCLNQ16625 522 aa7.02□□□□□ -1.29
HMGB1P33-201ENST00000563485 TRIM11Q96F44 468 aa7.02□□□□□ -1.29
HMGB1P33-201ENST00000563485 MYO19Q96H55 970 aa7.02□□□□□ -1.29
HMGB1P33-201ENST00000563485 LRFN2Q9ULH4 789 aa7.02□□□□□ -1.29
HMGB1P33-201ENST00000563485 STARD13Q9Y3M8 1113 aa7.02□□□□□ -1.29
HMGB1P33-201ENST00000563485 INPP5BP32019 993 aa7.01□□□□□ -1.29
HMGB1P33-201ENST00000563485 TBC1D8BQ0IIM8 1120 aa7.01□□□□□ -1.29
HMGB1P33-201ENST00000563485 C11orf91Q3C1V1 193 aa7.01□□□□□ -1.29
HMGB1P33-201ENST00000563485 TMEM164Q5U3C3 297 aa7.01□□□□□ -1.29
HMGB1P33-201ENST00000563485 ALYREFQ86V81 257 aaKnown RBP7.01□□□□□ -1.29
HMGB1P33-201ENST00000563485 PBXIP1Q96AQ6 731 aa7.01□□□□□ -1.29
HMGB1P33-201ENST00000563485 GSX2Q9BZM3 304 aa7.01□□□□□ -1.29
HMGB1P33-201ENST00000563485 SERPINA10Q9UK55 444 aa7.01□□□□□ -1.29
HMGB1P33-201ENST00000563485 M0R082 166 aa7□□□□□ -1.29
HMGB1P33-201ENST00000563485 MSTNO14793 375 aa7□□□□□ -1.29
HMGB1P33-201ENST00000563485 MICAL2O94851 1124 aa7□□□□□ -1.29
HMGB1P33-201ENST00000563485 ALBP02768 609 aa7□□□□□ -1.29
HMGB1P33-201ENST00000563485 C8orf86Q6ZUL3 223 aa7□□□□□ -1.29
HMGB1P33-201ENST00000563485 ZNF417Q8TAU3 575 aa7□□□□□ -1.29
HMGB1P33-201ENST00000563485 ZNF587Q96SQ5 575 aaPredicted RBP7□□□□□ -1.29
HMGB1P33-201ENST00000563485 SPOCK3Q9BQ16 436 aa7□□□□□ -1.29
HMGB1P33-201ENST00000563485 UBE2OQ9C0C9 1292 aaKnown RBP7□□□□□ -1.29
HMGB1P33-201ENST00000563485 NOP53Q9NZM5 478 aaKnown RBP7□□□□□ -1.29
HMGB1P33-201ENST00000563485 PROCP04070 461 aa6.99□□□□□ -1.29
HMGB1P33-201ENST00000563485 NFKB1P19838 968 aa6.99□□□□□ -1.29
HMGB1P33-201ENST00000563485 ARSDP51689 593 aa6.99□□□□□ -1.29
HMGB1P33-201ENST00000563485 CCINQ13939 588 aa6.99□□□□□ -1.29
HMGB1P33-201ENST00000563485 COX20Q5RI15 118 aa6.99□□□□□ -1.29
HMGB1P33-201ENST00000563485 IFT43Q96FT9 208 aa6.99□□□□□ -1.29
HMGB1P33-201ENST00000563485 PNMA5Q96PV4 448 aa6.99□□□□□ -1.29
HMGB1P33-201ENST00000563485 PLVAPQ9BX97 442 aa6.99□□□□□ -1.29
HMGB1P33-201ENST00000563485 IGFLR1Q9H665 355 aa6.99□□□□□ -1.29
HMGB1P33-201ENST00000563485 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.99□□□□□ -1.29
HMGB1P33-201ENST00000563485 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P33-201ENST00000563485 EPB42P16452 691 aa6.98□□□□□ -1.29
HMGB1P33-201ENST00000563485 COL9A3Q14050 684 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P33-201ENST00000563485 CAPN12Q6ZSI9 719 aa6.98□□□□□ -1.29
HMGB1P33-201ENST00000563485 KRT25Q7Z3Z0 450 aa6.98□□□□□ -1.29
HMGB1P33-201ENST00000563485 MICALL1Q8N3F8 863 aa6.98□□□□□ -1.29
HMGB1P33-201ENST00000563485 MKNK1Q9BUB5 465 aa6.98□□□□□ -1.29
HMGB1P33-201ENST00000563485 SAP130Q9H0E3 1048 aa6.98□□□□□ -1.29
HMGB1P33-201ENST00000563485 CXXC1Q9P0U4 656 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P33-201ENST00000563485 SLC6A14Q9UN76 642 aa6.98□□□□□ -1.29
HMGB1P33-201ENST00000563485 USP20Q9Y2K6 914 aa6.98□□□□□ -1.29
HMGB1P33-201ENST00000563485 CCDC82Q8N4S0 544 aa6.97□□□□□ -1.29
HMGB1P33-201ENST00000563485 EFCC1Q9HA90 598 aa6.97□□□□□ -1.29
HMGB1P33-201ENST00000563485 DNAJB12Q9NXW2 375 aaKnown RBP6.97□□□□□ -1.29
HMGB1P33-201ENST00000563485 SLAIN2Q9P270 581 aa6.97□□□□□ -1.29
HMGB1P33-201ENST00000563485 OPLAHO14841 1288 aa6.96□□□□□ -1.3
HMGB1P33-201ENST00000563485 C16orf46Q6P387 395 aa6.96□□□□□ -1.3
HMGB1P33-201ENST00000563485 C20orf204Q6ZNR8 217 aa6.96□□□□□ -1.3
HMGB1P33-201ENST00000563485 TREML1Q86YW5 311 aa6.96□□□□□ -1.3
HMGB1P33-201ENST00000563485 CLP1Q92989 425 aaKnown RBP6.96□□□□□ -1.3
HMGB1P33-201ENST00000563485 PRDM6Q9NQX0 595 aa6.96□□□□□ -1.3
HMGB1P33-201ENST00000563485 ZFATQ9P243 1243 aa6.96□□□□□ -1.3
HMGB1P33-201ENST00000563485 NAGPAQ9UK23 515 aa6.96□□□□□ -1.3
HMGB1P33-201ENST00000563485 C1QTNF9BB2RNN3 333 aa6.95□□□□□ -1.3
HMGB1P33-201ENST00000563485 CHRNA4P43681 627 aa6.95□□□□□ -1.3
HMGB1P33-201ENST00000563485 NAA30Q147X3 362 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P33-201ENST00000563485 SUZ12Q15022 739 aaKnown RBP6.95□□□□□ -1.3
HMGB1P33-201ENST00000563485 FAM26DQ5JW98 314 aa6.95□□□□□ -1.3
HMGB1P33-201ENST00000563485 CD163Q86VB7 1156 aa6.95□□□□□ -1.3
HMGB1P33-201ENST00000563485 ETFBKMTQ8IXQ9 262 aa6.95□□□□□ -1.3
HMGB1P33-201ENST00000563485 COL26A1Q96A83 441 aa6.95□□□□□ -1.3
HMGB1P33-201ENST00000563485 C1orf115Q9H7X2 142 aa6.95□□□□□ -1.3
HMGB1P33-201ENST00000563485 RTCBQ9Y3I0 505 aaKnown RBP6.95□□□□□ -1.3
HMGB1P33-201ENST00000563485 FAM229AH3BQW9 127 aa6.94□□□□□ -1.3
HMGB1P33-201ENST00000563485 TNFRSF10BO14763 440 aa6.94□□□□□ -1.3
HMGB1P33-201ENST00000563485 SASH3O75995 380 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms