RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 RPGRQ92834 1020 aaKnown RBP24.68■■□□□ 1.54
KATNB1-202ENST00000562542 COL3A1P02461 1466 aaPredicted RBP24.67■■□□□ 1.54
KATNB1-202ENST00000562542 HLFQ16534 295 aa24.67■■□□□ 1.54
KATNB1-202ENST00000562542 MCOLN1Q9GZU1 580 aa24.67■■□□□ 1.54
KATNB1-202ENST00000562542 COL4A5P29400 1685 aa24.66■■□□□ 1.54
KATNB1-202ENST00000562542 NBPF26B4DH59 902 aa24.66■■□□□ 1.54
KATNB1-202ENST00000562542 CA12O43570 354 aa24.66■■□□□ 1.54
KATNB1-202ENST00000562542 TRIM26Q12899 539 aaPredicted RBP24.66■■□□□ 1.54
KATNB1-202ENST00000562542 NBPF10Q6P3W6 841 aaKnown RBP24.66■■□□□ 1.54
KATNB1-202ENST00000562542 NUTM1Q86Y26 1132 aa24.66■■□□□ 1.54
KATNB1-202ENST00000562542 NIM1KQ8IY84 436 aa24.66■■□□□ 1.54
KATNB1-202ENST00000562542 NBPF15Q8N660 670 aa24.66■■□□□ 1.54
KATNB1-202ENST00000562542 NYXQ9GZU5 481 aa24.66■■□□□ 1.54
KATNB1-202ENST00000562542 SNED1Q8TER0 1413 aa24.66■■□□□ 1.54
KATNB1-202ENST00000562542 CLSPNQ9HAW4 1339 aa24.65■■□□□ 1.54
KATNB1-202ENST00000562542 PRKAR2BP31323 418 aa24.65■■□□□ 1.54
KATNB1-202ENST00000562542 CRY2Q49AN0 593 aa24.65■■□□□ 1.54
KATNB1-202ENST00000562542 RTF1Q92541 710 aaKnown RBP24.65■■□□□ 1.54
KATNB1-202ENST00000562542 PHACTR3Q96KR7 559 aa24.65■■□□□ 1.54
KATNB1-202ENST00000562542 ABCC12Q96J65 1359 aa24.65■■□□□ 1.54
KATNB1-202ENST00000562542 TCERG1O14776 1098 aaKnown RBP24.64■■□□□ 1.54
KATNB1-202ENST00000562542 PCGF6Q9BYE7 350 aa24.64■■□□□ 1.54
KATNB1-202ENST00000562542 TRPM7Q96QT4 1865 aa24.64■■□□□ 1.53
KATNB1-202ENST00000562542 CELF2O95319 508 aaKnown RBP24.63■■□□□ 1.53
KATNB1-202ENST00000562542 GRIPAP1Q4V328 841 aa24.63■■□□□ 1.53
KATNB1-202ENST00000562542 KIF7Q2M1P5 1343 aa24.62■■□□□ 1.53
KATNB1-202ENST00000562542 MCM10Q7L590 875 aa24.62■■□□□ 1.53
KATNB1-202ENST00000562542 NGEFQ8N5V2 710 aa24.62■■□□□ 1.53
KATNB1-202ENST00000562542 ADARB2Q9NS39 739 aaKnown RBP24.62■■□□□ 1.53
KATNB1-202ENST00000562542 PPIP5K2O43314 1243 aa24.61■■□□□ 1.53
KATNB1-202ENST00000562542 DGKZQ13574 1117 aa24.61■■□□□ 1.53
KATNB1-202ENST00000562542 SAPCD2Q86UD0 394 aa24.61■■□□□ 1.53
KATNB1-202ENST00000562542 PPEF1O14829 653 aaPredicted RBP24.6■■□□□ 1.53
KATNB1-202ENST00000562542 RBM17Q96I25 401 aaKnown RBP24.6■■□□□ 1.53
KATNB1-202ENST00000562542 TMX4Q9H1E5 349 aaPredicted RBP24.6■■□□□ 1.53
KATNB1-202ENST00000562542 ZNF408Q9H9D4 720 aa24.6■■□□□ 1.53
KATNB1-202ENST00000562542 GPRC5DQ9NZD1 345 aa24.6■■□□□ 1.53
KATNB1-202ENST00000562542 PER1O15534 1290 aaPredicted RBP24.59■■□□□ 1.53
KATNB1-202ENST00000562542 BRPF1P55201 1214 aaPredicted RBP24.59■■□□□ 1.53
KATNB1-202ENST00000562542 HOXA10P31260 410 aaPredicted RBP24.58■■□□□ 1.53
KATNB1-202ENST00000562542 GLIS2Q9BZE0 524 aaPredicted RBP24.58■■□□□ 1.53
KATNB1-202ENST00000562542 RSPH6AQ9H0K4 717 aa24.58■■□□□ 1.53
KATNB1-202ENST00000562542 GPTP24298 496 aa24.57■■□□□ 1.52
KATNB1-202ENST00000562542 AOC3Q16853 763 aa24.57■■□□□ 1.52
KATNB1-202ENST00000562542 CIAPIN1Q6FI81 312 aa24.57■■□□□ 1.52
KATNB1-202ENST00000562542 SLC51AQ86UW1 340 aa24.57■■□□□ 1.52
KATNB1-202ENST00000562542 DCTN1Q14203 1278 aa24.56■■□□□ 1.52
KATNB1-202ENST00000562542 KIF6Q6ZMV9 814 aa24.56■■□□□ 1.52
KATNB1-202ENST00000562542 HHIPL1Q96JK4 782 aa24.56■■□□□ 1.52
KATNB1-202ENST00000562542 CFAP53Q96M91 514 aa24.56■■□□□ 1.52
KATNB1-202ENST00000562542 CRAMP1Q96RY5 1269 aa24.56■■□□□ 1.52
KATNB1-202ENST00000562542 CASP8AP2Q9UKL3 1982 aa24.55■■□□□ 1.52
KATNB1-202ENST00000562542 ERVV-1B6SEH8 477 aa24.55■■□□□ 1.52
KATNB1-202ENST00000562542 NPC1L1Q9UHC9 1359 aa24.54■■□□□ 1.52
KATNB1-202ENST00000562542 GMPSP49915 693 aaPredicted RBP24.54■■□□□ 1.52
KATNB1-202ENST00000562542 MAP3K15Q6ZN16 1313 aa24.54■■□□□ 1.52
KATNB1-202ENST00000562542 RIC1Q4ADV7 1423 aa24.53■■□□□ 1.52
KATNB1-202ENST00000562542 CXCL9Q07325 125 aa24.53■■□□□ 1.52
KATNB1-202ENST00000562542 ZNRF3Q9ULT6 936 aa24.53■■□□□ 1.52
KATNB1-202ENST00000562542 NUDCQ9Y266 331 aa24.53■■□□□ 1.52
KATNB1-202ENST00000562542 BCL2L13Q9BXK5 485 aa24.52■■□□□ 1.52
KATNB1-202ENST00000562542 RRP7AQ9Y3A4 280 aaKnown RBP24.52■■□□□ 1.52
KATNB1-202ENST00000562542 U2AF1L5P0DN76 240 aaPredicted RBP24.51■■□□□ 1.51
KATNB1-202ENST00000562542 U2AF1Q01081 240 aaKnown RBP eCLIP24.51■■□□□ 1.51
KATNB1-202ENST00000562542 NOGQ13253 232 aa24.51■■□□□ 1.51
KATNB1-202ENST00000562542 TAF7Q15545 349 aaPredicted RBP24.51■■□□□ 1.51
KATNB1-202ENST00000562542 SUSD4Q5VX71 490 aa24.51■■□□□ 1.51
KATNB1-202ENST00000562542 SUPT20HQ8NEM7 779 aa24.51■■□□□ 1.51
KATNB1-202ENST00000562542 ZBTB3Q9H5J0 574 aa24.51■■□□□ 1.51
KATNB1-202ENST00000562542 MIS18AQ9NYP9 233 aa24.51■■□□□ 1.51
KATNB1-202ENST00000562542 UBN2Q6ZU65 1347 aa24.51■■□□□ 1.51
KATNB1-202ENST00000562542 IBTKQ9P2D0 1353 aaPredicted RBP24.51■■□□□ 1.51
KATNB1-202ENST00000562542 TTLL7Q6ZT98 887 aa24.5■■□□□ 1.51
KATNB1-202ENST00000562542 VPS33BQ9H267 617 aa24.5■■□□□ 1.51
KATNB1-202ENST00000562542 TNRC18O15417 2968 aaPredicted RBP24.5■■□□□ 1.51
KATNB1-202ENST00000562542 MYL6BP14649 208 aa24.49■■□□□ 1.51
KATNB1-202ENST00000562542 C3orf67Q6ZVT6 689 aa24.49■■□□□ 1.51
KATNB1-202ENST00000562542 CDC37L1Q7L3B6 337 aa24.49■■□□□ 1.51
KATNB1-202ENST00000562542 ATP6V0A2Q9Y487 856 aa24.49■■□□□ 1.51
KATNB1-202ENST00000562542 LAMB4A4D0S4 1761 aa24.49■■□□□ 1.51
KATNB1-202ENST00000562542 NUP98P52948 1817 aa24.48■■□□□ 1.51
KATNB1-202ENST00000562542 HUNKP57058 714 aa24.48■■□□□ 1.51
KATNB1-202ENST00000562542 ZC3H15Q8WU90 426 aaKnown RBP24.48■■□□□ 1.51
KATNB1-202ENST00000562542 NLRP3Q96P20 1036 aa24.48■■□□□ 1.51
KATNB1-202ENST00000562542 PGAP2Q9UHJ9 254 aa24.48■■□□□ 1.51
KATNB1-202ENST00000562542 CDHR2Q9BYE9 1310 aa24.47■■□□□ 1.51
KATNB1-202ENST00000562542 HTATSF1O43719 755 aaKnown RBP24.47■■□□□ 1.51
KATNB1-202ENST00000562542 RAD17O75943 681 aa24.47■■□□□ 1.51
KATNB1-202ENST00000562542 DPP8Q6V1X1 898 aaPredicted RBP24.47■■□□□ 1.51
KATNB1-202ENST00000562542 ZIC5Q96T25 663 aa24.47■■□□□ 1.51
KATNB1-202ENST00000562542 NTSR2O95665 410 aa24.46■■□□□ 1.51
KATNB1-202ENST00000562542 SOX10P56693 466 aa24.46■■□□□ 1.51
KATNB1-202ENST00000562542 TNIP1Q15025 636 aa24.46■■□□□ 1.51
KATNB1-202ENST00000562542 PPP1R42Q7Z4L9 355 aa24.46■■□□□ 1.51
KATNB1-202ENST00000562542 TRPM4Q8TD43 1214 aa24.46■■□□□ 1.51
KATNB1-202ENST00000562542 HIRAP54198 1017 aaPredicted RBP24.45■■□□□ 1.5
KATNB1-202ENST00000562542 USP48Q86UV5 1035 aa24.44■■□□□ 1.5
KATNB1-202ENST00000562542 ZNF34Q8IZ26 560 aa24.44■■□□□ 1.5
KATNB1-202ENST00000562542 ABCC4O15439 1325 aa24.43■■□□□ 1.5
KATNB1-202ENST00000562542 H7C1D1 291 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms