RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 WASLO00401 505 aaPredicted RBP12.93□□□□□ -0.34
RPAP1-204ENST00000562303 BIN1O00499 593 aa12.93□□□□□ -0.34
RPAP1-204ENST00000562303 FERP16591 822 aa12.93□□□□□ -0.34
RPAP1-204ENST00000562303 UBE3BQ7Z3V4 1068 aa12.93□□□□□ -0.34
RPAP1-204ENST00000562303 KIF18AQ8NI77 898 aa12.93□□□□□ -0.34
RPAP1-204ENST00000562303 NAA15Q9BXJ9 866 aaKnown RBP12.93□□□□□ -0.34
RPAP1-204ENST00000562303 ECHDC1Q9NTX5 307 aa12.93□□□□□ -0.34
RPAP1-204ENST00000562303 STX8Q9UNK0 236 aa12.93□□□□□ -0.34
RPAP1-204ENST00000562303 PLEKHH1Q9ULM0 1364 aa12.93□□□□□ -0.34
RPAP1-204ENST00000562303 F8W031 263 aaPredicted RBP12.93□□□□□ -0.34
RPAP1-204ENST00000562303 PPM1EQ8WY54 764 aa12.93□□□□□ -0.34
RPAP1-204ENST00000562303 PYM1Q9BRP8 204 aaKnown RBP12.93□□□□□ -0.34
RPAP1-204ENST00000562303 ABCC11Q96J66 1382 aa12.93□□□□□ -0.34
RPAP1-204ENST00000562303 CEBPAP49715 358 aaPredicted RBP12.93□□□□□ -0.34
RPAP1-204ENST00000562303 NCOA7Q8NI08 942 aa12.93□□□□□ -0.34
RPAP1-204ENST00000562303 ERMNQ8TAM6 284 aa12.93□□□□□ -0.34
RPAP1-204ENST00000562303 FSD2A1L4K1 749 aa12.93□□□□□ -0.34
RPAP1-204ENST00000562303 UQCRFS1P1P0C7P4 283 aa12.93□□□□□ -0.34
RPAP1-204ENST00000562303 TSPY3P0CV98 308 aa12.93□□□□□ -0.34
RPAP1-204ENST00000562303 TSPY8P0CW00 308 aa12.93□□□□□ -0.34
RPAP1-204ENST00000562303 GIGYF2Q6Y7W6 1299 aaKnown RBP12.93□□□□□ -0.34
RPAP1-204ENST00000562303 MRPS9P82933 396 aaKnown RBP12.93□□□□□ -0.34
RPAP1-204ENST00000562303 PDCL2Q8N4E4 241 aa12.92□□□□□ -0.34
RPAP1-204ENST00000562303 OGFOD1Q8N543 542 aa12.92□□□□□ -0.34
RPAP1-204ENST00000562303 ORC3Q9UBD5 711 aaPredicted RBP12.92□□□□□ -0.34
RPAP1-204ENST00000562303 CHRNA2Q15822 529 aa12.92□□□□□ -0.34
RPAP1-204ENST00000562303 JARID2Q92833 1246 aaPredicted RBP12.92□□□□□ -0.34
RPAP1-204ENST00000562303 PHACTR2O75167 634 aa12.91□□□□□ -0.34
RPAP1-204ENST00000562303 ANKRD24Q8TF21 1146 aa12.91□□□□□ -0.34
RPAP1-204ENST00000562303 EXOC1Q9NV70 894 aa12.91□□□□□ -0.34
RPAP1-204ENST00000562303 PTPRCP08575 1304 aa12.91□□□□□ -0.34
RPAP1-204ENST00000562303 RARSP54136 660 aaKnown RBP12.91□□□□□ -0.34
RPAP1-204ENST00000562303 C16orf71Q8IYS4 520 aaPredicted RBP12.91□□□□□ -0.34
RPAP1-204ENST00000562303 SETDB2Q96T68 719 aa12.91□□□□□ -0.34
RPAP1-204ENST00000562303 SNRPA1P09661 255 aaKnown RBP12.91□□□□□ -0.34
RPAP1-204ENST00000562303 GJB2P29033 226 aa12.91□□□□□ -0.34
RPAP1-204ENST00000562303 LRRC45Q96CN5 670 aa12.91□□□□□ -0.34
RPAP1-204ENST00000562303 SNAPC4Q5SXM2 1469 aa12.91□□□□□ -0.34
RPAP1-204ENST00000562303 TFIP11Q9UBB9 837 aaKnown RBP12.91□□□□□ -0.34
RPAP1-204ENST00000562303 PICALMQ13492 652 aa12.9□□□□□ -0.34
RPAP1-204ENST00000562303 TMC6Q7Z403 805 aa12.9□□□□□ -0.34
RPAP1-204ENST00000562303 ACSBG1Q96GR2 724 aa12.9□□□□□ -0.34
RPAP1-204ENST00000562303 IKBKGQ9Y6K9 419 aa12.9□□□□□ -0.34
RPAP1-204ENST00000562303 POLA1P09884 1462 aaPredicted RBP12.9□□□□□ -0.34
RPAP1-204ENST00000562303 PPFIA3O75145 1194 aa12.9□□□□□ -0.34
RPAP1-204ENST00000562303 TRAF1Q13077 416 aa12.9□□□□□ -0.34
RPAP1-204ENST00000562303 KANK3Q6NY19 840 aa12.9□□□□□ -0.34
RPAP1-204ENST00000562303 TBC1D5Q92609 795 aa12.9□□□□□ -0.34
RPAP1-204ENST00000562303 NEK1Q96PY6 1258 aa12.9□□□□□ -0.34
RPAP1-204ENST00000562303 DDX19AQ9NUU7 478 aaKnown RBP12.9□□□□□ -0.34
RPAP1-204ENST00000562303 TRMT1Q9NXH9 659 aaKnown RBP12.9□□□□□ -0.34
RPAP1-204ENST00000562303 CCDC172P0C7W6 258 aa12.9□□□□□ -0.34
RPAP1-204ENST00000562303 CCDC175P0C221 793 aa12.9□□□□□ -0.34
RPAP1-204ENST00000562303 NBPF7P0C2Y1 421 aaPredicted RBP12.9□□□□□ -0.34
RPAP1-204ENST00000562303 CYP7A1P22680 504 aa12.9□□□□□ -0.34
RPAP1-204ENST00000562303 ATP6V1AP38606 617 aa12.9□□□□□ -0.34
RPAP1-204ENST00000562303 USP37Q86T82 979 aa12.9□□□□□ -0.34
RPAP1-204ENST00000562303 PPP1R14CQ8TAE6 165 aa12.9□□□□□ -0.34
RPAP1-204ENST00000562303 TRIM47Q96LD4 638 aa12.9□□□□□ -0.34
RPAP1-204ENST00000562303 TTC21BQ7Z4L5 1316 aa12.9□□□□□ -0.34
RPAP1-204ENST00000562303 CD109Q6YHK3 1445 aa12.9□□□□□ -0.34
RPAP1-204ENST00000562303 HECW1Q76N89 1606 aa12.9□□□□□ -0.34
RPAP1-204ENST00000562303 WTAPQ15007 396 aa12.9□□□□□ -0.35
RPAP1-204ENST00000562303 ISM2Q6H9L7 571 aa12.9□□□□□ -0.35
RPAP1-204ENST00000562303 ZGPATQ8N5A5 531 aaKnown RBP12.9□□□□□ -0.35
RPAP1-204ENST00000562303 ESPNB1AK53 854 aa12.89□□□□□ -0.35
RPAP1-204ENST00000562303 STX1AQ16623 288 aa12.89□□□□□ -0.35
RPAP1-204ENST00000562303 RNF187Q5TA31 235 aaPredicted RBP12.89□□□□□ -0.35
RPAP1-204ENST00000562303 PLS1Q14651 629 aa12.89□□□□□ -0.35
RPAP1-204ENST00000562303 PPP4R3BQ5MIZ7 849 aa12.89□□□□□ -0.35
RPAP1-204ENST00000562303 FBXO31Q5XUX0 539 aaPredicted RBP12.89□□□□□ -0.35
RPAP1-204ENST00000562303 ARL1P40616 181 aaPredicted RBP12.89□□□□□ -0.35
RPAP1-204ENST00000562303 PI4KAP2A4QPH2 592 aa12.88□□□□□ -0.35
RPAP1-204ENST00000562303 ECM2O94769 699 aaPredicted RBP12.88□□□□□ -0.35
RPAP1-204ENST00000562303 KRT13P13646 458 aa12.88□□□□□ -0.35
RPAP1-204ENST00000562303 CCDC102BQ68D86 513 aa12.88□□□□□ -0.35
RPAP1-204ENST00000562303 PI4KAP1Q8N8J0 262 aa12.88□□□□□ -0.35
RPAP1-204ENST00000562303 GIMAP7Q8NHV1 300 aa12.88□□□□□ -0.35
RPAP1-204ENST00000562303 IFIT1BQ5T764 474 aaKnown RBP12.88□□□□□ -0.35
RPAP1-204ENST00000562303 CADPS2Q86UW7 1296 aa12.88□□□□□ -0.35
RPAP1-204ENST00000562303 HEATR3Q7Z4Q2 680 aa12.88□□□□□ -0.35
RPAP1-204ENST00000562303 MAATS1Q7Z4T9 603 aa12.88□□□□□ -0.35
RPAP1-204ENST00000562303 KRT23Q9C075 422 aa12.88□□□□□ -0.35
RPAP1-204ENST00000562303 VEZTQ9HBM0 779 aa12.88□□□□□ -0.35
RPAP1-204ENST00000562303 IQSEC3Q9UPP2 1182 aaPredicted RBP12.88□□□□□ -0.35
RPAP1-204ENST00000562303 SLC4A4Q9Y6R1 1079 aa12.88□□□□□ -0.35
RPAP1-204ENST00000562303 IFI16Q16666 785 aaKnown RBP12.88□□□□□ -0.35
RPAP1-204ENST00000562303 SMARCC2Q8TAQ2 1214 aa12.88□□□□□ -0.35
RPAP1-204ENST00000562303 PIK3R4Q99570 1358 aa12.88□□□□□ -0.35
RPAP1-204ENST00000562303 UBAP1LF5GYI3 381 aa12.88□□□□□ -0.35
RPAP1-204ENST00000562303 MCM5P33992 734 aa12.88□□□□□ -0.35
RPAP1-204ENST00000562303 ANKRD13DQ6ZTN6 518 aa12.88□□□□□ -0.35
RPAP1-204ENST00000562303 RGS22Q8NE09 1264 aa12.88□□□□□ -0.35
RPAP1-204ENST00000562303 NLRP3Q96P20 1036 aa12.88□□□□□ -0.35
RPAP1-204ENST00000562303 JADE2Q9NQC1 790 aa12.88□□□□□ -0.35
RPAP1-204ENST00000562303 RMND1Q9NWS8 449 aa12.88□□□□□ -0.35
RPAP1-204ENST00000562303 RBM26Q5T8P6 1007 aaKnown RBP12.87□□□□□ -0.35
RPAP1-204ENST00000562303 ZSCAN30Q86W11 494 aa12.87□□□□□ -0.35
RPAP1-204ENST00000562303 OTUD6BQ8N6M0 293 aa12.87□□□□□ -0.35
RPAP1-204ENST00000562303 GSDMDP57764 484 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms