RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 PPP1R42Q7Z4L9 355 aa12.27□□□□□ -0.45
NSMCE1-203ENST00000562039 NLRP10Q86W26 655 aa12.27□□□□□ -0.45
NSMCE1-203ENST00000562039 JARID2Q92833 1246 aaPredicted RBP12.27□□□□□ -0.45
NSMCE1-203ENST00000562039 RPGRQ92834 1020 aaKnown RBP12.27□□□□□ -0.45
NSMCE1-203ENST00000562039 TAOK3Q9H2K8 898 aa12.27□□□□□ -0.45
NSMCE1-203ENST00000562039 DBF4Q9UBU7 674 aaPredicted RBP12.27□□□□□ -0.45
NSMCE1-203ENST00000562039 KLRG2A4D1S0 409 aaPredicted RBP12.26□□□□□ -0.45
NSMCE1-203ENST00000562039 PARP10Q53GL7 1025 aa12.26□□□□□ -0.45
NSMCE1-203ENST00000562039 CCDC93Q567U6 631 aa12.26□□□□□ -0.45
NSMCE1-203ENST00000562039 ANKRD13DQ6ZTN6 518 aa12.26□□□□□ -0.45
NSMCE1-203ENST00000562039 C7orf43Q8WVR3 580 aa12.26□□□□□ -0.45
NSMCE1-203ENST00000562039 ZNF277Q9NRM2 450 aaPredicted RBP12.26□□□□□ -0.45
NSMCE1-203ENST00000562039 TRMT112Q9UI30 125 aaKnown RBP12.26□□□□□ -0.45
NSMCE1-203ENST00000562039 HOXB7P09629 217 aa12.25□□□□□ -0.45
NSMCE1-203ENST00000562039 HSP90AB3PQ58FF7 597 aa12.25□□□□□ -0.45
NSMCE1-203ENST00000562039 RIC3Q7Z5B4 369 aa12.25□□□□□ -0.45
NSMCE1-203ENST00000562039 PLBD2Q8NHP8 589 aa12.25□□□□□ -0.45
NSMCE1-203ENST00000562039 HYPKQ9NX55 129 aa12.25□□□□□ -0.45
NSMCE1-203ENST00000562039 FER1L6Q2WGJ9 1857 aa12.25□□□□□ -0.45
NSMCE1-203ENST00000562039 GOLGA2Q08379 1002 aa12.24□□□□□ -0.45
NSMCE1-203ENST00000562039 C16orf71Q8IYS4 520 aaPredicted RBP12.24□□□□□ -0.45
NSMCE1-203ENST00000562039 KDM2BQ8NHM5 1336 aa12.24□□□□□ -0.45
NSMCE1-203ENST00000562039 RBM17Q96I25 401 aaKnown RBP12.24□□□□□ -0.45
NSMCE1-203ENST00000562039 NLRP3Q96P20 1036 aa12.24□□□□□ -0.45
NSMCE1-203ENST00000562039 MYD88Q99836 296 aa12.24□□□□□ -0.45
NSMCE1-203ENST00000562039 ANKRD36CQ5JPF3 1778 aa12.23□□□□□ -0.45
NSMCE1-203ENST00000562039 TIAM2Q8IVF5 1701 aa12.23□□□□□ -0.45
NSMCE1-203ENST00000562039 PPEF1O14829 653 aaPredicted RBP12.23□□□□□ -0.45
NSMCE1-203ENST00000562039 ALDH1B1P30837 517 aa12.23□□□□□ -0.45
NSMCE1-203ENST00000562039 CRY2Q49AN0 593 aa12.23□□□□□ -0.45
NSMCE1-203ENST00000562039 FAM89AQ96GI7 184 aa12.23□□□□□ -0.45
NSMCE1-203ENST00000562039 SPINK5Q9NQ38 1064 aaPredicted RBP12.23□□□□□ -0.45
NSMCE1-203ENST00000562039 ARFGEF2Q9Y6D5 1785 aa12.23□□□□□ -0.45
NSMCE1-203ENST00000562039 IBTKQ9P2D0 1353 aaPredicted RBP12.22□□□□□ -0.45
NSMCE1-203ENST00000562039 FANCIQ9NVI1 1328 aa12.22□□□□□ -0.45
NSMCE1-203ENST00000562039 DDNO94850 711 aaPredicted RBP12.22□□□□□ -0.45
NSMCE1-203ENST00000562039 FKBP4Q02790 459 aaKnown RBP eCLIP12.22□□□□□ -0.45
NSMCE1-203ENST00000562039 TWISTNBQ3B726 338 aaPredicted RBP12.22□□□□□ -0.45
NSMCE1-203ENST00000562039 CCDC30Q5VVM6 783 aa12.22□□□□□ -0.45
NSMCE1-203ENST00000562039 G2E3Q7L622 706 aa12.22□□□□□ -0.45
NSMCE1-203ENST00000562039 ISCA1Q9BUE6 129 aa12.22□□□□□ -0.45
NSMCE1-203ENST00000562039 TAF1P21675 1872 aa12.21□□□□□ -0.45
NSMCE1-203ENST00000562039 ABCC4O15439 1325 aa12.21□□□□□ -0.45
NSMCE1-203ENST00000562039 SH3TC1Q8TE82 1336 aa12.21□□□□□ -0.45
NSMCE1-203ENST00000562039 GLTPD2A6NH11 291 aa12.21□□□□□ -0.45
NSMCE1-203ENST00000562039 EXOSC9Q06265 439 aaKnown RBP12.21□□□□□ -0.45
NSMCE1-203ENST00000562039 CCDC27Q2M243 656 aa12.21□□□□□ -0.45
NSMCE1-203ENST00000562039 SOGA3Q5TF21 947 aa12.21□□□□□ -0.45
NSMCE1-203ENST00000562039 CCDC85AQ96PX6 553 aaPredicted RBP12.21□□□□□ -0.45
NSMCE1-203ENST00000562039 ZNF541Q9H0D2 1346 aa12.2□□□□□ -0.46
NSMCE1-203ENST00000562039 TOMM70O94826 608 aa12.2□□□□□ -0.46
NSMCE1-203ENST00000562039 HTRA3P83110 453 aa12.2□□□□□ -0.46
NSMCE1-203ENST00000562039 SLC10A5Q5PT55 438 aa12.2□□□□□ -0.46
NSMCE1-203ENST00000562039 CRAMP1Q96RY5 1269 aa12.2□□□□□ -0.46
NSMCE1-203ENST00000562039 MAP3K2Q9Y2U5 619 aa12.2□□□□□ -0.46
NSMCE1-203ENST00000562039 LAMB2P55268 1798 aa12.2□□□□□ -0.46
NSMCE1-203ENST00000562039 LTBP3Q9NS15 1303 aa12.19□□□□□ -0.46
NSMCE1-203ENST00000562039 POTECB2RU33 542 aa12.19□□□□□ -0.46
NSMCE1-203ENST00000562039 IRS4O14654 1257 aaPredicted RBP12.19□□□□□ -0.46
NSMCE1-203ENST00000562039 SLC4A2P04920 1241 aa12.19□□□□□ -0.46
NSMCE1-203ENST00000562039 HOXA10P31260 410 aaPredicted RBP12.19□□□□□ -0.46
NSMCE1-203ENST00000562039 IARSP41252 1262 aaKnown RBP12.19□□□□□ -0.46
NSMCE1-203ENST00000562039 DPY19L2Q6NUT2 758 aa12.19□□□□□ -0.46
NSMCE1-203ENST00000562039 DDX46Q7L014 1031 aaKnown RBP12.19□□□□□ -0.46
NSMCE1-203ENST00000562039 RTKN2Q8IZC4 609 aa12.19□□□□□ -0.46
NSMCE1-203ENST00000562039 STK31Q9BXU1 1019 aa12.19□□□□□ -0.46
NSMCE1-203ENST00000562039 DICER1Q9UPY3 1922 aaKnown RBP12.18□□□□□ -0.46
NSMCE1-203ENST00000562039 PI4KAP2A4QPH2 592 aa12.18□□□□□ -0.46
NSMCE1-203ENST00000562039 HSPA6P17066 643 aa12.18□□□□□ -0.46
NSMCE1-203ENST00000562039 PI4KAP1Q8N8J0 262 aa12.18□□□□□ -0.46
NSMCE1-203ENST00000562039 CELF1Q92879 486 aaKnown RBP12.18□□□□□ -0.46
NSMCE1-203ENST00000562039 GJA3Q9Y6H8 435 aa12.18□□□□□ -0.46
NSMCE1-203ENST00000562039 RIC1Q4ADV7 1423 aa12.18□□□□□ -0.46
NSMCE1-203ENST00000562039 IL16Q14005 1332 aa12.17□□□□□ -0.46
NSMCE1-203ENST00000562039 DDX58O95786 925 aaKnown RBP12.17□□□□□ -0.46
NSMCE1-203ENST00000562039 POTEIP0CG38 1075 aa12.17□□□□□ -0.46
NSMCE1-203ENST00000562039 POTEJP0CG39 1038 aa12.17□□□□□ -0.46
NSMCE1-203ENST00000562039 VEGFAP15692 232 aaPredicted RBP12.17□□□□□ -0.46
NSMCE1-203ENST00000562039 AOC3Q16853 763 aa12.17□□□□□ -0.46
NSMCE1-203ENST00000562039 CWF19L2Q2TBE0 894 aaKnown RBP12.17□□□□□ -0.46
NSMCE1-203ENST00000562039 WDR63Q8IWG1 891 aa12.17□□□□□ -0.46
NSMCE1-203ENST00000562039 LARGE2Q8N3Y3 721 aa12.17□□□□□ -0.46
NSMCE1-203ENST00000562039 METTL22Q9BUU2 404 aaPredicted RBP12.17□□□□□ -0.46
NSMCE1-203ENST00000562039 TMX4Q9H1E5 349 aaPredicted RBP12.17□□□□□ -0.46
NSMCE1-203ENST00000562039 SEC31BQ9NQW1 1179 aa12.17□□□□□ -0.46
NSMCE1-203ENST00000562039 DDX60Q8IY21 1712 aaKnown RBP12.17□□□□□ -0.46
NSMCE1-203ENST00000562039 COL4A1P02462 1669 aa12.16□□□□□ -0.46
NSMCE1-203ENST00000562039 COL4A5P29400 1685 aa12.16□□□□□ -0.46
NSMCE1-203ENST00000562039 ZC3H4Q9UPT8 1303 aaKnown RBP12.16□□□□□ -0.46
NSMCE1-203ENST00000562039 PPIP5K2O43314 1243 aa12.16□□□□□ -0.46
NSMCE1-203ENST00000562039 VAMP4O75379 141 aa12.16□□□□□ -0.46
NSMCE1-203ENST00000562039 GRAPQ13588 217 aa12.16□□□□□ -0.46
NSMCE1-203ENST00000562039 KSR2Q6VAB6 950 aa12.16□□□□□ -0.46
NSMCE1-203ENST00000562039 RBM46Q8TBY0 533 aaKnown RBP12.16□□□□□ -0.46
NSMCE1-203ENST00000562039 GRAPLQ8TC17 118 aaPredicted RBP12.16□□□□□ -0.46
NSMCE1-203ENST00000562039 GPR101Q96P66 508 aaPredicted RBP12.16□□□□□ -0.46
NSMCE1-203ENST00000562039 CWC25Q9NXE8 425 aaPredicted RBP12.16□□□□□ -0.46
NSMCE1-203ENST00000562039 ATP6V0A2Q9Y487 856 aa12.16□□□□□ -0.46
NSMCE1-203ENST00000562039 RNF123Q5XPI4 1314 aa12.15□□□□□ -0.46
NSMCE1-203ENST00000562039 SNED1Q8TER0 1413 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms