RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 EPS15P42566 896 aa15.58■□□□□ 0.08
NSMCE1-202ENST00000561960 CTCFP49711 727 aaPredicted RBP15.58■□□□□ 0.08
NSMCE1-202ENST00000561960 UBN2Q6ZU65 1347 aa15.58■□□□□ 0.08
NSMCE1-202ENST00000561960 CASP8AP2Q9UKL3 1982 aa15.57■□□□□ 0.08
NSMCE1-202ENST00000561960 KLRG2A4D1S0 409 aaPredicted RBP15.57■□□□□ 0.08
NSMCE1-202ENST00000561960 FZD9O00144 591 aa15.57■□□□□ 0.08
NSMCE1-202ENST00000561960 HSPA8P11142 646 aaKnown RBP15.57■□□□□ 0.08
NSMCE1-202ENST00000561960 DEFB115Q30KQ5 88 aa15.57■□□□□ 0.08
NSMCE1-202ENST00000561960 RTKN2Q8IZC4 609 aa15.57■□□□□ 0.08
NSMCE1-202ENST00000561960 NPC1L1Q9UHC9 1359 aa15.57■□□□□ 0.08
NSMCE1-202ENST00000561960 SNED1Q8TER0 1413 aa15.57■□□□□ 0.08
NSMCE1-202ENST00000561960 CYP4F22Q6NT55 531 aa15.56■□□□□ 0.08
NSMCE1-202ENST00000561960 RPGRQ92834 1020 aaKnown RBP15.56■□□□□ 0.08
NSMCE1-202ENST00000561960 WBP1LQ9NX94 342 aa15.56■□□□□ 0.08
NSMCE1-202ENST00000561960 NUDCQ9Y266 331 aa15.56■□□□□ 0.08
NSMCE1-202ENST00000561960 WDR33Q9C0J8 1336 aaKnown RBP15.56■□□□□ 0.08
NSMCE1-202ENST00000561960 ANKRD36CQ5JPF3 1778 aa15.55■□□□□ 0.08
NSMCE1-202ENST00000561960 ANXA1P04083 346 aa15.55■□□□□ 0.08
NSMCE1-202ENST00000561960 ALDH1B1P30837 517 aa15.55■□□□□ 0.08
NSMCE1-202ENST00000561960 TAF7Q15545 349 aaPredicted RBP15.55■□□□□ 0.08
NSMCE1-202ENST00000561960 SUSD4Q5VX71 490 aa15.55■□□□□ 0.08
NSMCE1-202ENST00000561960 GPC2Q8N158 579 aa15.55■□□□□ 0.08
NSMCE1-202ENST00000561960 LARGE2Q8N3Y3 721 aa15.55■□□□□ 0.08
NSMCE1-202ENST00000561960 JDP2Q8WYK2 163 aa15.55■□□□□ 0.08
NSMCE1-202ENST00000561960 PRDM10Q9NQV6 1147 aa15.55■□□□□ 0.08
NSMCE1-202ENST00000561960 TNRC18O15417 2968 aaPredicted RBP15.54■□□□□ 0.08
NSMCE1-202ENST00000561960 PPEF1O14829 653 aaPredicted RBP15.54■□□□□ 0.08
NSMCE1-202ENST00000561960 AOC2O75106 756 aa15.54■□□□□ 0.08
NSMCE1-202ENST00000561960 SCNN1DP51172 638 aa15.54■□□□□ 0.08
NSMCE1-202ENST00000561960 EIF6P56537 245 aaKnown RBP15.54■□□□□ 0.08
NSMCE1-202ENST00000561960 AOC3Q16853 763 aa15.54■□□□□ 0.08
NSMCE1-202ENST00000561960 FAM161AQ3B820 660 aa15.54■□□□□ 0.08
NSMCE1-202ENST00000561960 NECTIN2Q92692 538 aa15.54■□□□□ 0.08
NSMCE1-202ENST00000561960 DDX21Q9NR30 783 aaKnown RBP eCLIP15.54■□□□□ 0.08
NSMCE1-202ENST00000561960 POLR2AP24928 1970 aaKnown RBP15.53■□□□□ 0.08
NSMCE1-202ENST00000561960 MAP3K15Q6ZN16 1313 aa15.53■□□□□ 0.08
NSMCE1-202ENST00000561960 RASSF10A6NK89 507 aa15.53■□□□□ 0.08
NSMCE1-202ENST00000561960 LMOD1P29536 600 aaPredicted RBP15.53■□□□□ 0.08
NSMCE1-202ENST00000561960 KIF6Q6ZMV9 814 aa15.53■□□□□ 0.08
NSMCE1-202ENST00000561960 THSD7BQ9C0I4 1608 aa15.53■□□□□ 0.08
NSMCE1-202ENST00000561960 CRY2Q49AN0 593 aa15.52■□□□□ 0.08
NSMCE1-202ENST00000561960 DLK2Q6UY11 383 aa15.52■□□□□ 0.08
NSMCE1-202ENST00000561960 PNMA8AQ86V59 439 aaPredicted RBP15.52■□□□□ 0.08
NSMCE1-202ENST00000561960 ABHD8Q96I13 439 aa15.52■□□□□ 0.08
NSMCE1-202ENST00000561960 CAPNS2Q96L46 248 aa15.52■□□□□ 0.08
NSMCE1-202ENST00000561960 SHTN1A0MZ66 631 aa15.51■□□□□ 0.07
NSMCE1-202ENST00000561960 PPIP5K2O43314 1243 aa15.51■□□□□ 0.07
NSMCE1-202ENST00000561960 PSMD1Q99460 953 aa15.51■□□□□ 0.07
NSMCE1-202ENST00000561960 NYXQ9GZU5 481 aa15.51■□□□□ 0.07
NSMCE1-202ENST00000561960 ZNF408Q9H9D4 720 aa15.51■□□□□ 0.07
NSMCE1-202ENST00000561960 CCDC85CA6NKD9 419 aa15.5■□□□□ 0.07
NSMCE1-202ENST00000561960 NTSR2O95665 410 aa15.5■□□□□ 0.07
NSMCE1-202ENST00000561960 EIF2S2P20042 333 aaKnown RBP15.5■□□□□ 0.07
NSMCE1-202ENST00000561960 EIF4A1P60842 406 aaKnown RBP15.5■□□□□ 0.07
NSMCE1-202ENST00000561960 PROSER3Q2NL68 480 aa15.5■□□□□ 0.07
NSMCE1-202ENST00000561960 CST9Q5W186 159 aa15.5■□□□□ 0.07
NSMCE1-202ENST00000561960 NIM1KQ8IY84 436 aa15.5■□□□□ 0.07
NSMCE1-202ENST00000561960 COL4A1P02462 1669 aa15.49■□□□□ 0.07
NSMCE1-202ENST00000561960 RBM17Q96I25 401 aaKnown RBP15.49■□□□□ 0.07
NSMCE1-202ENST00000561960 CFAP44Q96MT7 982 aa15.49■□□□□ 0.07
NSMCE1-202ENST00000561960 GLIS2Q9BZE0 524 aaPredicted RBP15.49■□□□□ 0.07
NSMCE1-202ENST00000561960 GPR101Q96P66 508 aaPredicted RBP15.48■□□□□ 0.07
NSMCE1-202ENST00000561960 RIC1Q4ADV7 1423 aa15.48■□□□□ 0.07
NSMCE1-202ENST00000561960 DDX60Q8IY21 1712 aaKnown RBP15.48■□□□□ 0.07
NSMCE1-202ENST00000561960 ABCC4O15439 1325 aa15.47■□□□□ 0.07
NSMCE1-202ENST00000561960 RAD17O75943 681 aa15.47■□□□□ 0.07
NSMCE1-202ENST00000561960 HCLS1P14317 486 aaPredicted RBP15.47■□□□□ 0.07
NSMCE1-202ENST00000561960 GMPSP49915 693 aaPredicted RBP15.47■□□□□ 0.07
NSMCE1-202ENST00000561960 MAP2K1Q02750 393 aaPredicted RBP15.47■□□□□ 0.07
NSMCE1-202ENST00000561960 AIMP1Q12904 312 aaKnown RBP15.47■□□□□ 0.07
NSMCE1-202ENST00000561960 ERVV-1B6SEH8 477 aa15.46■□□□□ 0.07
NSMCE1-202ENST00000561960 HTATSF1O43719 755 aaKnown RBP15.46■□□□□ 0.07
NSMCE1-202ENST00000561960 CELF2O95319 508 aaKnown RBP15.46■□□□□ 0.07
NSMCE1-202ENST00000561960 ZNF34Q8IZ26 560 aa15.46■□□□□ 0.07
NSMCE1-202ENST00000561960 HOXA10P31260 410 aaPredicted RBP15.45■□□□□ 0.06
NSMCE1-202ENST00000561960 CXCL9Q07325 125 aa15.45■□□□□ 0.06
NSMCE1-202ENST00000561960 TRPM4Q8TD43 1214 aa15.45■□□□□ 0.06
NSMCE1-202ENST00000561960 GPRC5DQ9NZD1 345 aa15.45■□□□□ 0.06
NSMCE1-202ENST00000561960 TSPYL4Q9UJ04 414 aa15.45■□□□□ 0.06
NSMCE1-202ENST00000561960 NFE2L2Q16236 605 aa15.44■□□□□ 0.06
NSMCE1-202ENST00000561960 KRT24Q2M2I5 525 aa15.44■□□□□ 0.06
NSMCE1-202ENST00000561960 GIGYF2Q6Y7W6 1299 aaKnown RBP15.44■□□□□ 0.06
NSMCE1-202ENST00000561960 CRAMP1Q96RY5 1269 aa15.44■□□□□ 0.06
NSMCE1-202ENST00000561960 PLEKHF1Q96S99 279 aa15.44■□□□□ 0.06
NSMCE1-202ENST00000561960 ZIC5Q96T25 663 aa15.44■□□□□ 0.06
NSMCE1-202ENST00000561960 BEGAINQ9BUH8 593 aa15.44■□□□□ 0.06
NSMCE1-202ENST00000561960 TLL2Q9Y6L7 1015 aa15.44■□□□□ 0.06
NSMCE1-202ENST00000561960 DUOX1Q9NRD9 1551 aa15.44■□□□□ 0.06
NSMCE1-202ENST00000561960 NEFMP07197 916 aa15.43■□□□□ 0.06
NSMCE1-202ENST00000561960 HIRAP54198 1017 aaPredicted RBP15.43■□□□□ 0.06
NSMCE1-202ENST00000561960 USP50Q70EL3 339 aaPredicted RBP15.43■□□□□ 0.06
NSMCE1-202ENST00000561960 NLRP3Q96P20 1036 aa15.43■□□□□ 0.06
NSMCE1-202ENST00000561960 UTP14AQ9BVJ6 771 aaKnown RBP15.43■□□□□ 0.06
NSMCE1-202ENST00000561960 PDIA6Q15084 440 aa15.42■□□□□ 0.06
NSMCE1-202ENST00000561960 RTL5Q5HYW3 569 aaPredicted RBP15.42■□□□□ 0.06
NSMCE1-202ENST00000561960 CC2D2BQ6DHV5 1058 aa15.42■□□□□ 0.06
NSMCE1-202ENST00000561960 DPP8Q6V1X1 898 aaPredicted RBP15.42■□□□□ 0.06
NSMCE1-202ENST00000561960 PPP1R42Q7Z4L9 355 aa15.42■□□□□ 0.06
NSMCE1-202ENST00000561960 PNISRQ8TF01 805 aaKnown RBP15.42■□□□□ 0.06
NSMCE1-202ENST00000561960 BCL2L13Q9BXK5 485 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms