RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 GIGYF1O75420 1035 aaPredicted RBP8.27□□□□□ -1.09
CAPN3-210ENST00000561817 PDIA4P13667 645 aaKnown RBP8.27□□□□□ -1.09
CAPN3-210ENST00000561817 TOM1L2Q6ZVM7 507 aa8.27□□□□□ -1.09
CAPN3-210ENST00000561817 SIRT2Q8IXJ6 389 aa8.27□□□□□ -1.09
CAPN3-210ENST00000561817 DCAF5Q96JK2 942 aa8.27□□□□□ -1.09
CAPN3-210ENST00000561817 ARID3AQ99856 593 aa8.27□□□□□ -1.09
CAPN3-210ENST00000561817 BTG4Q9NY30 223 aa8.27□□□□□ -1.09
CAPN3-210ENST00000561817 RBM19Q9Y4C8 960 aaKnown RBP8.27□□□□□ -1.09
CAPN3-210ENST00000561817 SLIT2O94813 1529 aa8.27□□□□□ -1.09
CAPN3-210ENST00000561817 TOGARAM1Q9Y4F4 1720 aa8.26□□□□□ -1.09
CAPN3-210ENST00000561817 PAPPAQ13219 1627 aa8.26□□□□□ -1.09
CAPN3-210ENST00000561817 HSP90B1P14625 803 aaKnown RBP8.26□□□□□ -1.09
CAPN3-210ENST00000561817 IL2RBP14784 551 aa8.26□□□□□ -1.09
CAPN3-210ENST00000561817 FLIIQ13045 1269 aa8.26□□□□□ -1.09
CAPN3-210ENST00000561817 ZNF772Q68DY9 489 aaPredicted RBP8.26□□□□□ -1.09
CAPN3-210ENST00000561817 SMC5Q8IY18 1101 aa8.26□□□□□ -1.09
CAPN3-210ENST00000561817 ZCRB1Q8TBF4 217 aaKnown RBP8.26□□□□□ -1.09
CAPN3-210ENST00000561817 NECTIN2Q92692 538 aa8.26□□□□□ -1.09
CAPN3-210ENST00000561817 RWDD1Q9H446 243 aaPredicted RBP8.26□□□□□ -1.09
CAPN3-210ENST00000561817 USP35Q9P2H5 1018 aa8.26□□□□□ -1.09
CAPN3-210ENST00000561817 C5P01031 1676 aa8.26□□□□□ -1.09
CAPN3-210ENST00000561817 ATP10DQ9P241 1426 aa8.26□□□□□ -1.09
CAPN3-210ENST00000561817 PXDNLA1KZ92 1463 aa8.26□□□□□ -1.09
CAPN3-210ENST00000561817 UBR2Q8IWV8 1755 aa8.25□□□□□ -1.09
CAPN3-210ENST00000561817 PRAMEF22A3QJZ6 481 aa8.25□□□□□ -1.09
CAPN3-210ENST00000561817 GOLGA8CPA6NN73 597 aa8.25□□□□□ -1.09
CAPN3-210ENST00000561817 BHMG1C9JSJ3 638 aaPredicted RBP8.25□□□□□ -1.09
CAPN3-210ENST00000561817 HSP90AB1P08238 724 aaKnown RBP8.25□□□□□ -1.09
CAPN3-210ENST00000561817 EVA1CP58658 441 aa8.25□□□□□ -1.09
CAPN3-210ENST00000561817 PDIA6Q15084 440 aa8.25□□□□□ -1.09
CAPN3-210ENST00000561817 HDGFL1Q5TGJ6 251 aa8.25□□□□□ -1.09
CAPN3-210ENST00000561817 ZNF790Q6PG37 636 aa8.25□□□□□ -1.09
CAPN3-210ENST00000561817 NFATC2IPQ8NCF5 419 aa8.25□□□□□ -1.09
CAPN3-210ENST00000561817 PCDHGA10Q9Y5H3 936 aa8.25□□□□□ -1.09
CAPN3-210ENST00000561817 PCDH11XQ9BZA7 1347 aa8.25□□□□□ -1.09
CAPN3-210ENST00000561817 PCDH11YQ9BZA8 1340 aa8.25□□□□□ -1.09
CAPN3-210ENST00000561817 ATRNO75882 1429 aa8.24□□□□□ -1.09
CAPN3-210ENST00000561817 TNS2Q63HR2 1409 aa8.24□□□□□ -1.09
CAPN3-210ENST00000561817 ERVV-2B6SEH9 535 aa8.24□□□□□ -1.09
CAPN3-210ENST00000561817 F6X3S4 739 aa8.24□□□□□ -1.09
CAPN3-210ENST00000561817 SLC39A6Q13433 755 aa8.24□□□□□ -1.09
CAPN3-210ENST00000561817 POTEAQ6S8J7 498 aa8.24□□□□□ -1.09
CAPN3-210ENST00000561817 LRP10Q7Z4F1 713 aa8.24□□□□□ -1.09
CAPN3-210ENST00000561817 FBXW7Q969H0 707 aa8.24□□□□□ -1.09
CAPN3-210ENST00000561817 STK31Q9BXU1 1019 aa8.24□□□□□ -1.09
CAPN3-210ENST00000561817 NBPF3Q9H094 633 aa8.24□□□□□ -1.09
CAPN3-210ENST00000561817 CHMP4BQ9H444 224 aaKnown RBP8.24□□□□□ -1.09
CAPN3-210ENST00000561817 PHAXQ9H814 394 aaKnown RBP8.24□□□□□ -1.09
CAPN3-210ENST00000561817 QTRT2Q9H974 415 aaKnown RBP8.24□□□□□ -1.09
CAPN3-210ENST00000561817 TRPC5Q9UL62 973 aaPredicted RBP8.24□□□□□ -1.09
CAPN3-210ENST00000561817 PDZRN3Q9UPQ7 1066 aa8.24□□□□□ -1.09
CAPN3-210ENST00000561817 BCL9LQ86UU0 1499 aa8.24□□□□□ -1.09
CAPN3-210ENST00000561817 KCPQ6ZWJ8 1503 aa8.24□□□□□ -1.09
CAPN3-210ENST00000561817 PHF14O94880 888 aa8.23□□□□□ -1.09
CAPN3-210ENST00000561817 CCT4P50991 539 aaKnown RBP8.23□□□□□ -1.09
CAPN3-210ENST00000561817 CAMK2BQ13554 666 aa8.23□□□□□ -1.09
CAPN3-210ENST00000561817 PROSER3Q2NL68 480 aa8.23□□□□□ -1.09
CAPN3-210ENST00000561817 TYW1BQ6NUM6 668 aa8.23□□□□□ -1.09
CAPN3-210ENST00000561817 UNC5CLQ8IV45 518 aa8.23□□□□□ -1.09
CAPN3-210ENST00000561817 ZNF496Q96IT1 587 aaPredicted RBP8.23□□□□□ -1.09
CAPN3-210ENST00000561817 MEIS3Q99687 375 aa8.23□□□□□ -1.09
CAPN3-210ENST00000561817 BACH2Q9BYV9 841 aa8.23□□□□□ -1.09
CAPN3-210ENST00000561817 C1orf115Q9H7X2 142 aa8.23□□□□□ -1.09
CAPN3-210ENST00000561817 CHPF2Q9P2E5 772 aa8.23□□□□□ -1.09
CAPN3-210ENST00000561817 RGS17Q9UGC6 210 aaPredicted RBP8.23□□□□□ -1.09
CAPN3-210ENST00000561817 KAT6BQ8WYB5 2073 aa8.23□□□□□ -1.09
CAPN3-210ENST00000561817 ADCY9O60503 1353 aa8.22□□□□□ -1.09
CAPN3-210ENST00000561817 THSD7AQ9UPZ6 1657 aa8.22□□□□□ -1.09
CAPN3-210ENST00000561817 PPP1R3GB7ZBB8 358 aa8.22□□□□□ -1.09
CAPN3-210ENST00000561817 EIF2S2P20042 333 aaKnown RBP8.22□□□□□ -1.09
CAPN3-210ENST00000561817 RXRBP28702 533 aa8.22□□□□□ -1.09
CAPN3-210ENST00000561817 PTPN5P54829 565 aa8.22□□□□□ -1.09
CAPN3-210ENST00000561817 ANKRD44Q8N8A2 993 aa8.22□□□□□ -1.09
CAPN3-210ENST00000561817 CHMP4AQ9BY43 222 aa8.22□□□□□ -1.09
CAPN3-210ENST00000561817 LAMB4A4D0S4 1761 aa8.22□□□□□ -1.09
CAPN3-210ENST00000561817 IBTKQ9P2D0 1353 aaPredicted RBP8.22□□□□□ -1.09
CAPN3-210ENST00000561817 ANXA1P04083 346 aa8.21□□□□□ -1.1
CAPN3-210ENST00000561817 CABP4P57796 275 aa8.21□□□□□ -1.1
CAPN3-210ENST00000561817 NUCB1Q02818 461 aa8.21□□□□□ -1.1
CAPN3-210ENST00000561817 FKBP5Q13451 457 aaPredicted RBP8.21□□□□□ -1.1
CAPN3-210ENST00000561817 FAM98CQ17RN3 349 aaKnown RBP8.21□□□□□ -1.1
CAPN3-210ENST00000561817 C8orf34Q49A92 452 aa8.21□□□□□ -1.1
CAPN3-210ENST00000561817 BEND3Q5T5X7 828 aa8.21□□□□□ -1.1
CAPN3-210ENST00000561817 CEP85Q6P2H3 762 aa8.21□□□□□ -1.1
CAPN3-210ENST00000561817 FNBP4Q8N3X1 1017 aaPredicted RBP8.21□□□□□ -1.1
CAPN3-210ENST00000561817 WNT2BQ93097 391 aa8.21□□□□□ -1.1
CAPN3-210ENST00000561817 DDX21Q9NR30 783 aaKnown RBP eCLIP8.21□□□□□ -1.1
CAPN3-210ENST00000561817 DBF4Q9UBU7 674 aaPredicted RBP8.21□□□□□ -1.1
CAPN3-210ENST00000561817 SPATA31A1Q5TZJ5 1347 aa8.21□□□□□ -1.1
CAPN3-210ENST00000561817 ITGB4P16144 1822 aa8.2□□□□□ -1.1
CAPN3-210ENST00000561817 DPYSL4O14531 572 aa8.2□□□□□ -1.1
CAPN3-210ENST00000561817 SNRPA1P09661 255 aaKnown RBP8.2□□□□□ -1.1
CAPN3-210ENST00000561817 RBM6P78332 1123 aaKnown RBP8.2□□□□□ -1.1
CAPN3-210ENST00000561817 THSD4Q6ZMP0 1018 aa8.2□□□□□ -1.1
CAPN3-210ENST00000561817 ILDR2Q71H61 639 aa8.2□□□□□ -1.1
CAPN3-210ENST00000561817 RPAP2Q8IXW5 612 aaPredicted RBP8.2□□□□□ -1.1
CAPN3-210ENST00000561817 EPAS1Q99814 870 aa8.2□□□□□ -1.1
CAPN3-210ENST00000561817 USP44Q9H0E7 712 aa8.2□□□□□ -1.1
CAPN3-210ENST00000561817 DCTPP1Q9H773 170 aa8.2□□□□□ -1.1
CAPN3-210ENST00000561817 USP16Q9Y5T5 823 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms