RNA–Protein interactions for RNA: ENST00000561743.5

USB1-205, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 3 BASIC

Gene USB1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-205ENST00000561743 PARP10Q53GL7 1025 aa17.6■□□□□ 0.41
USB1-205ENST00000561743 PPP1R42Q7Z4L9 355 aa17.6■□□□□ 0.41
USB1-205ENST00000561743 SNED1Q8TER0 1413 aa17.6■□□□□ 0.41
USB1-205ENST00000561743 DDX60Q8IY21 1712 aaKnown RBP17.59■□□□□ 0.41
USB1-205ENST00000561743 HDGFL1Q5TGJ6 251 aa17.59■□□□□ 0.41
USB1-205ENST00000561743 HOXA10P31260 410 aaPredicted RBP17.58■□□□□ 0.4
USB1-205ENST00000561743 FKBP4Q02790 459 aaKnown RBP eCLIP17.58■□□□□ 0.4
USB1-205ENST00000561743 C3orf67Q6ZVT6 689 aa17.58■□□□□ 0.4
USB1-205ENST00000561743 IFT57Q9NWB7 429 aa17.58■□□□□ 0.4
USB1-205ENST00000561743 ZNF316A6NFI3 1004 aaPredicted RBP17.57■□□□□ 0.4
USB1-205ENST00000561743 VEGFAP15692 232 aaPredicted RBP17.57■□□□□ 0.4
USB1-205ENST00000561743 HSP90AB3PQ58FF7 597 aa17.57■□□□□ 0.4
USB1-205ENST00000561743 DUSP27Q5VZP5 1158 aa17.57■□□□□ 0.4
USB1-205ENST00000561743 DPY19L2Q6NUT2 758 aa17.57■□□□□ 0.4
USB1-205ENST00000561743 RPGRQ92834 1020 aaKnown RBP17.57■□□□□ 0.4
USB1-205ENST00000561743 UTP14AQ9BVJ6 771 aaKnown RBP17.57■□□□□ 0.4
USB1-205ENST00000561743 TAF1P21675 1872 aa17.56■□□□□ 0.4
USB1-205ENST00000561743 POTECB2RU33 542 aa17.56■□□□□ 0.4
USB1-205ENST00000561743 APLP1P51693 650 aa17.56■□□□□ 0.4
USB1-205ENST00000561743 CALD1Q05682 793 aaKnown RBP17.56■□□□□ 0.4
USB1-205ENST00000561743 FSTL1Q12841 308 aa17.56■□□□□ 0.4
USB1-205ENST00000561743 RTKN2Q8IZC4 609 aa17.56■□□□□ 0.4
USB1-205ENST00000561743 DBF4Q9UBU7 674 aaPredicted RBP17.56■□□□□ 0.4
USB1-205ENST00000561743 SCN4AP35499 1836 aa17.56■□□□□ 0.4
USB1-205ENST00000561743 RNF123Q5XPI4 1314 aa17.55■□□□□ 0.4
USB1-205ENST00000561743 GNAI1P63096 354 aa17.55■□□□□ 0.4
USB1-205ENST00000561743 TCIRG1Q13488 830 aa17.55■□□□□ 0.4
USB1-205ENST00000561743 SLC10A5Q5PT55 438 aa17.55■□□□□ 0.4
USB1-205ENST00000561743 NLRP10Q86W26 655 aa17.55■□□□□ 0.4
USB1-205ENST00000561743 ZNF277Q9NRM2 450 aaPredicted RBP17.55■□□□□ 0.4
USB1-205ENST00000561743 PLBD2Q8NHP8 589 aa17.54■□□□□ 0.4
USB1-205ENST00000561743 RBM17Q96I25 401 aaKnown RBP17.54■□□□□ 0.4
USB1-205ENST00000561743 NLRP3Q96P20 1036 aa17.54■□□□□ 0.4
USB1-205ENST00000561743 CRAMP1Q96RY5 1269 aa17.54■□□□□ 0.4
USB1-205ENST00000561743 COL4A5P29400 1685 aa17.54■□□□□ 0.4
USB1-205ENST00000561743 DDNO94850 711 aaPredicted RBP17.53■□□□□ 0.4
USB1-205ENST00000561743 ANKRD13DQ6ZTN6 518 aa17.53■□□□□ 0.4
USB1-205ENST00000561743 SLC51AQ86UW1 340 aa17.53■□□□□ 0.4
USB1-205ENST00000561743 SYNE4Q8N205 404 aa17.53■□□□□ 0.4
USB1-205ENST00000561743 SMC1BQ8NDV3 1235 aa17.53■□□□□ 0.4
USB1-205ENST00000561743 HYPKQ9NX55 129 aa17.53■□□□□ 0.4
USB1-205ENST00000561743 CC2D2BQ6DHV5 1058 aa17.52■□□□□ 0.4
USB1-205ENST00000561743 PSMD1Q99460 953 aa17.52■□□□□ 0.4
USB1-205ENST00000561743 SH3TC1Q8TE82 1336 aa17.51■□□□□ 0.39
USB1-205ENST00000561743 LRRC37AA6NMS7 1700 aa17.51■□□□□ 0.39
USB1-205ENST00000561743 ELL2O00472 640 aaPredicted RBP17.51■□□□□ 0.39
USB1-205ENST00000561743 PPEF1O14829 653 aaPredicted RBP17.51■□□□□ 0.39
USB1-205ENST00000561743 HCLS1P14317 486 aaPredicted RBP17.51■□□□□ 0.39
USB1-205ENST00000561743 IARSP41252 1262 aaKnown RBP17.51■□□□□ 0.39
USB1-205ENST00000561743 C8orf58Q8NAV2 365 aa17.51■□□□□ 0.39
USB1-205ENST00000561743 TRMT112Q9UI30 125 aaKnown RBP17.51■□□□□ 0.39
USB1-205ENST00000561743 ABCC4O15439 1325 aa17.5■□□□□ 0.39
USB1-205ENST00000561743 ZNF541Q9H0D2 1346 aa17.5■□□□□ 0.39
USB1-205ENST00000561743 ANP32CO43423 234 aa17.5■□□□□ 0.39
USB1-205ENST00000561743 ZNF428Q96B54 188 aa17.5■□□□□ 0.39
USB1-205ENST00000561743 ISCA1Q9BUE6 129 aa17.5■□□□□ 0.39
USB1-205ENST00000561743 MRS2Q9HD23 443 aa17.5■□□□□ 0.39
USB1-205ENST00000561743 TCERG1O14776 1098 aaKnown RBP17.49■□□□□ 0.39
USB1-205ENST00000561743 CCDC27Q2M243 656 aa17.49■□□□□ 0.39
USB1-205ENST00000561743 GRIPAP1Q4V328 841 aa17.49■□□□□ 0.39
USB1-205ENST00000561743 L3MBTL3Q96JM7 780 aaPredicted RBP17.49■□□□□ 0.39
USB1-205ENST00000561743 PHAXQ9H814 394 aaKnown RBP17.49■□□□□ 0.39
USB1-205ENST00000561743 ATP5J2-PTCD1G3V325 749 aa17.48■□□□□ 0.39
USB1-205ENST00000561743 FZD9O00144 591 aa17.48■□□□□ 0.39
USB1-205ENST00000561743 HTRA3P83110 453 aa17.48■□□□□ 0.39
USB1-205ENST00000561743 WWC1Q8IX03 1113 aa17.48■□□□□ 0.39
USB1-205ENST00000561743 DNAJC5GQ8N7S2 189 aa17.48■□□□□ 0.39
USB1-205ENST00000561743 TSPYL6Q8N831 410 aa17.48■□□□□ 0.39
USB1-205ENST00000561743 TSR2Q969E8 191 aaKnown RBP17.48■□□□□ 0.39
USB1-205ENST00000561743 COL4A1P02462 1669 aa17.48■□□□□ 0.39
USB1-205ENST00000561743 ADAMTSL1Q8N6G6 1762 aa17.48■□□□□ 0.39
USB1-205ENST00000561743 ATP6V0A2Q9Y487 856 aa17.47■□□□□ 0.39
USB1-205ENST00000561743 FAM89AQ96GI7 184 aa17.46■□□□□ 0.39
USB1-205ENST00000561743 DUOX1Q9NRD9 1551 aa17.45■□□□□ 0.38
USB1-205ENST00000561743 LTBP1Q14766 1721 aa17.45■□□□□ 0.38
USB1-205ENST00000561743 IQCA1LA6NCM1 817 aa17.45■□□□□ 0.38
USB1-205ENST00000561743 POTEIP0CG38 1075 aa17.45■□□□□ 0.38
USB1-205ENST00000561743 POTEJP0CG39 1038 aa17.45■□□□□ 0.38
USB1-205ENST00000561743 GOLGA2Q08379 1002 aa17.45■□□□□ 0.38
USB1-205ENST00000561743 TRIM28Q13263 835 aaKnown RBP17.45■□□□□ 0.38
USB1-205ENST00000561743 CCDC30Q5VVM6 783 aa17.45■□□□□ 0.38
USB1-205ENST00000561743 RIC3Q7Z5B4 369 aa17.45■□□□□ 0.38
USB1-205ENST00000561743 JDP2Q8WYK2 163 aa17.45■□□□□ 0.38
USB1-205ENST00000561743 CACNA1FO60840 1977 aa17.45■□□□□ 0.38
USB1-205ENST00000561743 BBOX1O75936 387 aa17.44■□□□□ 0.38
USB1-205ENST00000561743 GRAPQ13588 217 aa17.44■□□□□ 0.38
USB1-205ENST00000561743 NCBP3Q53F19 620 aaKnown RBP17.44■□□□□ 0.38
USB1-205ENST00000561743 DDX46Q7L014 1031 aaKnown RBP17.44■□□□□ 0.38
USB1-205ENST00000561743 GRAPLQ8TC17 118 aaPredicted RBP17.44■□□□□ 0.38
USB1-205ENST00000561743 TAF1DQ9H5J8 278 aaPredicted RBP17.44■□□□□ 0.38
USB1-205ENST00000561743 IL16Q14005 1332 aa17.44■□□□□ 0.38
USB1-205ENST00000561743 RTL5Q5HYW3 569 aaPredicted RBP17.43■□□□□ 0.38
USB1-205ENST00000561743 SP8Q8IXZ3 490 aa17.43■□□□□ 0.38
USB1-205ENST00000561743 GPC2Q8N158 579 aa17.43■□□□□ 0.38
USB1-205ENST00000561743 LARGE2Q8N3Y3 721 aa17.43■□□□□ 0.38
USB1-205ENST00000561743 TMX4Q9H1E5 349 aaPredicted RBP17.43■□□□□ 0.38
USB1-205ENST00000561743 MYH3P11055 1940 aa17.43■□□□□ 0.38
USB1-205ENST00000561743 CHADLQ6NUI6 762 aa17.42■□□□□ 0.38
USB1-205ENST00000561743 MYD88Q99836 296 aa17.42■□□□□ 0.38
USB1-205ENST00000561743 RTFDC1Q9BY42 306 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms