RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 GLTPD2A6NH11 291 aa9.52□□□□□ -0.89
TPM1-231ENST00000561395 NKX1-1Q15270 411 aaPredicted RBP9.52□□□□□ -0.89
TPM1-231ENST00000561395 PDE4DIPQ5VU43 2346 aa9.52□□□□□ -0.89
TPM1-231ENST00000561395 CENPQQ7L2Z9 268 aaPredicted RBP9.52□□□□□ -0.89
TPM1-231ENST00000561395 ANKRD31Q8N7Z5 1873 aa9.52□□□□□ -0.89
TPM1-231ENST00000561395 STK31Q9BXU1 1019 aa9.52□□□□□ -0.89
TPM1-231ENST00000561395 CREBZFQ9NS37 354 aa9.52□□□□□ -0.89
TPM1-231ENST00000561395 TMOD3Q9NYL9 352 aa9.52□□□□□ -0.89
TPM1-231ENST00000561395 FBXO3Q9UK99 471 aa9.52□□□□□ -0.89
TPM1-231ENST00000561395 TNRC18O15417 2968 aaPredicted RBP9.52□□□□□ -0.89
TPM1-231ENST00000561395 CNTNAP1P78357 1384 aa9.51□□□□□ -0.89
TPM1-231ENST00000561395 SPDYE2BA6NHP3 402 aa9.51□□□□□ -0.89
TPM1-231ENST00000561395 SPDYE6P0CI01 402 aa9.51□□□□□ -0.89
TPM1-231ENST00000561395 CHRNA5P30532 468 aa9.51□□□□□ -0.89
TPM1-231ENST00000561395 CTCFP49711 727 aaPredicted RBP9.51□□□□□ -0.89
TPM1-231ENST00000561395 SPDYE2Q495Y8 402 aa9.51□□□□□ -0.89
TPM1-231ENST00000561395 HDGFL1Q5TGJ6 251 aa9.51□□□□□ -0.89
TPM1-231ENST00000561395 ARHGEF1Q92888 912 aaKnown RBP9.51□□□□□ -0.89
TPM1-231ENST00000561395 CHMP4AQ9BY43 222 aa9.51□□□□□ -0.89
TPM1-231ENST00000561395 COL11A2P13942 1736 aaPredicted RBP9.51□□□□□ -0.89
TPM1-231ENST00000561395 ARFGEF2Q9Y6D5 1785 aa9.5□□□□□ -0.89
TPM1-231ENST00000561395 ERVV-2B6SEH9 535 aa9.5□□□□□ -0.89
TPM1-231ENST00000561395 LMNB1P20700 586 aa9.5□□□□□ -0.89
TPM1-231ENST00000561395 RFC4P35249 363 aa9.5□□□□□ -0.89
TPM1-231ENST00000561395 PLCB2Q00722 1185 aa9.5□□□□□ -0.89
TPM1-231ENST00000561395 ZNF790Q6PG37 636 aa9.5□□□□□ -0.89
TPM1-231ENST00000561395 G2E3Q7L622 706 aa9.5□□□□□ -0.89
TPM1-231ENST00000561395 NFATC2IPQ8NCF5 419 aa9.5□□□□□ -0.89
TPM1-231ENST00000561395 AIDAQ96BJ3 306 aa9.5□□□□□ -0.89
TPM1-231ENST00000561395 ABHD8Q96I13 439 aa9.5□□□□□ -0.89
TPM1-231ENST00000561395 ZBTB40Q9NUA8 1239 aa9.5□□□□□ -0.89
TPM1-231ENST00000561395 PCDHB15Q9Y5E8 787 aa9.5□□□□□ -0.89
TPM1-231ENST00000561395 CNTNAP4Q9C0A0 1308 aa9.5□□□□□ -0.89
TPM1-231ENST00000561395 THSD7BQ9C0I4 1608 aa9.49□□□□□ -0.89
TPM1-231ENST00000561395 CABP4P57796 275 aa9.49□□□□□ -0.89
TPM1-231ENST00000561395 MLLT1Q03111 559 aaPredicted RBP9.49□□□□□ -0.89
TPM1-231ENST00000561395 DDR1Q08345 913 aa9.49□□□□□ -0.89
TPM1-231ENST00000561395 FLIIQ13045 1269 aa9.49□□□□□ -0.89
TPM1-231ENST00000561395 INTS3Q68E01 1043 aaKnown RBP9.49□□□□□ -0.89
TPM1-231ENST00000561395 NECTIN2Q92692 538 aa9.49□□□□□ -0.89
TPM1-231ENST00000561395 CHMP4BQ9H444 224 aaKnown RBP9.49□□□□□ -0.89
TPM1-231ENST00000561395 ATG3Q9NT62 314 aa9.49□□□□□ -0.89
TPM1-231ENST00000561395 POTECB2RU33 542 aa9.48□□□□□ -0.89
TPM1-231ENST00000561395 ZBTB7BO15156 539 aaPredicted RBP9.48□□□□□ -0.89
TPM1-231ENST00000561395 IGHDP01880 384 aa9.48□□□□□ -0.89
TPM1-231ENST00000561395 LBX1P52954 281 aa9.48□□□□□ -0.89
TPM1-231ENST00000561395 SLC39A6Q13433 755 aa9.48□□□□□ -0.89
TPM1-231ENST00000561395 RC3H1Q5TC82 1133 aaKnown RBP9.48□□□□□ -0.89
TPM1-231ENST00000561395 SLC4A9Q96Q91 983 aa9.48□□□□□ -0.89
TPM1-231ENST00000561395 CHPF2Q9P2E5 772 aa9.48□□□□□ -0.89
TPM1-231ENST00000561395 TRPM7Q96QT4 1865 aa9.48□□□□□ -0.89
TPM1-231ENST00000561395 ADAMTSL1Q8N6G6 1762 aa9.47□□□□□ -0.89
TPM1-231ENST00000561395 CASP8AP2Q9UKL3 1982 aa9.47□□□□□ -0.89
TPM1-231ENST00000561395 RPS6KA4O75676 772 aa9.47□□□□□ -0.89
TPM1-231ENST00000561395 EIF2S2P20042 333 aaKnown RBP9.47□□□□□ -0.89
TPM1-231ENST00000561395 CHADLQ6NUI6 762 aa9.47□□□□□ -0.89
TPM1-231ENST00000561395 TTC5Q8N0Z6 440 aa9.47□□□□□ -0.89
TPM1-231ENST00000561395 ZNF496Q96IT1 587 aaPredicted RBP9.47□□□□□ -0.89
TPM1-231ENST00000561395 FMNL2Q96PY5 1086 aa9.47□□□□□ -0.89
TPM1-231ENST00000561395 SRP68Q9UHB9 627 aaKnown RBP9.47□□□□□ -0.89
TPM1-231ENST00000561395 SSUH2Q9Y2M2 353 aa9.47□□□□□ -0.89
TPM1-231ENST00000561395 PRAMEF22A3QJZ6 481 aa9.46□□□□□ -0.9
TPM1-231ENST00000561395 CCT4P50991 539 aaKnown RBP9.46□□□□□ -0.9
TPM1-231ENST00000561395 FKBP5Q13451 457 aaPredicted RBP9.46□□□□□ -0.9
TPM1-231ENST00000561395 HDAC1Q13547 482 aaPredicted RBP9.46□□□□□ -0.9
TPM1-231ENST00000561395 RBM42Q9BTD8 480 aaKnown RBP9.46□□□□□ -0.9
TPM1-231ENST00000561395 RWDD1Q9H446 243 aaPredicted RBP9.46□□□□□ -0.9
TPM1-231ENST00000561395 DBF4Q9UBU7 674 aaPredicted RBP9.46□□□□□ -0.9
TPM1-231ENST00000561395 USP42Q9H9J4 1324 aaKnown RBP9.46□□□□□ -0.9
TPM1-231ENST00000561395 F6X3S4 739 aa9.45□□□□□ -0.9
TPM1-231ENST00000561395 NFKBIEO00221 500 aa9.45□□□□□ -0.9
TPM1-231ENST00000561395 POLRMTO00411 1230 aaKnown RBP9.45□□□□□ -0.9
TPM1-231ENST00000561395 SNRPA1P09661 255 aaKnown RBP9.45□□□□□ -0.9
TPM1-231ENST00000561395 POTEIP0CG38 1075 aa9.45□□□□□ -0.9
TPM1-231ENST00000561395 POTEJP0CG39 1038 aa9.45□□□□□ -0.9
TPM1-231ENST00000561395 HSPA8P11142 646 aaKnown RBP9.45□□□□□ -0.9
TPM1-231ENST00000561395 VEGFBP49765 207 aa9.45□□□□□ -0.9
TPM1-231ENST00000561395 PHAXQ9H814 394 aaKnown RBP9.45□□□□□ -0.9
TPM1-231ENST00000561395 TSHZ2Q9NRE2 1034 aa9.45□□□□□ -0.9
TPM1-231ENST00000561395 WBP1LQ9NX94 342 aa9.45□□□□□ -0.9
TPM1-231ENST00000561395 SLX4Q8IY92 1834 aa9.45□□□□□ -0.9
TPM1-231ENST00000561395 CCDC85CA6NKD9 419 aa9.44□□□□□ -0.9
TPM1-231ENST00000561395 RGS19P49795 217 aa9.44□□□□□ -0.9
TPM1-231ENST00000561395 PDIA6Q15084 440 aa9.44□□□□□ -0.9
TPM1-231ENST00000561395 PROSER3Q2NL68 480 aa9.44□□□□□ -0.9
TPM1-231ENST00000561395 DPY19L2Q6NUT2 758 aa9.44□□□□□ -0.9
TPM1-231ENST00000561395 DDX21Q9NR30 783 aaKnown RBP eCLIP9.44□□□□□ -0.9
TPM1-231ENST00000561395 HYPKQ9NX55 129 aa9.44□□□□□ -0.9
TPM1-231ENST00000561395 PASKQ96RG2 1323 aa9.44□□□□□ -0.9
TPM1-231ENST00000561395 LTBP1Q14766 1721 aa9.44□□□□□ -0.9
TPM1-231ENST00000561395 SCN7AQ01118 1682 aa9.43□□□□□ -0.9
TPM1-231ENST00000561395 ERBB4Q15303 1308 aa9.43□□□□□ -0.9
TPM1-231ENST00000561395 ANXA1P04083 346 aa9.43□□□□□ -0.9
TPM1-231ENST00000561395 SLC4A10Q6U841 1118 aa9.43□□□□□ -0.9
TPM1-231ENST00000561395 MEIS3Q99687 375 aa9.43□□□□□ -0.9
TPM1-231ENST00000561395 C1orf115Q9H7X2 142 aa9.43□□□□□ -0.9
TPM1-231ENST00000561395 TMEM88BA6NKF7 163 aa9.42□□□□□ -0.9
TPM1-231ENST00000561395 CRKLP46109 303 aaKnown RBP9.42□□□□□ -0.9
TPM1-231ENST00000561395 SKAP1Q86WV1 359 aa9.42□□□□□ -0.9
TPM1-231ENST00000561395 TTLL6Q8N841 843 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms