RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 SRGNP10124 158 aa25.57■■□□□ 1.68
TSPAN3-210ENST00000561277 DDX58O95786 925 aaKnown RBP25.56■■□□□ 1.68
TSPAN3-210ENST00000561277 CDCA7LQ96GN5 454 aa25.56■■□□□ 1.68
TSPAN3-210ENST00000561277 ARHGAP27Q6ZUM4 889 aa25.56■■□□□ 1.68
TSPAN3-210ENST00000561277 G2E3Q7L622 706 aa25.56■■□□□ 1.68
TSPAN3-210ENST00000561277 SLFN5Q08AF3 891 aa25.55■■□□□ 1.68
TSPAN3-210ENST00000561277 MASTLQ96GX5 879 aa25.55■■□□□ 1.68
TSPAN3-210ENST00000561277 CACNA1SQ13698 1873 aa25.54■■□□□ 1.68
TSPAN3-210ENST00000561277 STYK1Q6J9G0 422 aa25.54■■□□□ 1.68
TSPAN3-210ENST00000561277 ISCA1Q9BUE6 129 aa25.54■■□□□ 1.68
TSPAN3-210ENST00000561277 TRMT112Q9UI30 125 aaKnown RBP25.54■■□□□ 1.68
TSPAN3-210ENST00000561277 MYD88Q99836 296 aa25.53■■□□□ 1.68
TSPAN3-210ENST00000561277 ZNF219Q9P2Y4 722 aaPredicted RBP25.53■■□□□ 1.68
TSPAN3-210ENST00000561277 KLRG2A4D1S0 409 aaPredicted RBP25.52■■□□□ 1.68
TSPAN3-210ENST00000561277 FLIIQ13045 1269 aa25.52■■□□□ 1.68
TSPAN3-210ENST00000561277 MAP3K2Q9Y2U5 619 aa25.52■■□□□ 1.68
TSPAN3-210ENST00000561277 RIC1Q4ADV7 1423 aa25.52■■□□□ 1.68
TSPAN3-210ENST00000561277 PI4KAP2A4QPH2 592 aa25.52■■□□□ 1.68
TSPAN3-210ENST00000561277 NPR1P16066 1061 aa25.52■■□□□ 1.68
TSPAN3-210ENST00000561277 PI4KAP1Q8N8J0 262 aa25.52■■□□□ 1.68
TSPAN3-210ENST00000561277 CNKSR1Q969H4 720 aa25.52■■□□□ 1.68
TSPAN3-210ENST00000561277 RNF123Q5XPI4 1314 aa25.51■■□□□ 1.67
TSPAN3-210ENST00000561277 PRPF40BQ6NWY9 871 aaKnown RBP25.51■■□□□ 1.67
TSPAN3-210ENST00000561277 KSR2Q6VAB6 950 aa25.51■■□□□ 1.67
TSPAN3-210ENST00000561277 SYNE4Q8N205 404 aa25.51■■□□□ 1.67
TSPAN3-210ENST00000561277 ADCY9O60503 1353 aa25.51■■□□□ 1.67
TSPAN3-210ENST00000561277 SH3TC1Q8TE82 1336 aa25.5■■□□□ 1.67
TSPAN3-210ENST00000561277 HNRNPUQ00839 825 aaKnown RBP eCLIP25.5■■□□□ 1.67
TSPAN3-210ENST00000561277 FKBP5Q13451 457 aaPredicted RBP25.5■■□□□ 1.67
TSPAN3-210ENST00000561277 METTL22Q9BUU2 404 aaPredicted RBP25.5■■□□□ 1.67
TSPAN3-210ENST00000561277 CRY2Q49AN0 593 aa25.49■■□□□ 1.67
TSPAN3-210ENST00000561277 RTL5Q5HYW3 569 aaPredicted RBP25.49■■□□□ 1.67
TSPAN3-210ENST00000561277 C3orf67Q6ZVT6 689 aa25.49■■□□□ 1.67
TSPAN3-210ENST00000561277 SLX4Q8IY92 1834 aa25.48■■□□□ 1.67
TSPAN3-210ENST00000561277 C21orf2O43822 256 aa25.48■■□□□ 1.67
TSPAN3-210ENST00000561277 HCLS1P14317 486 aaPredicted RBP25.48■■□□□ 1.67
TSPAN3-210ENST00000561277 RPGRQ92834 1020 aaKnown RBP25.48■■□□□ 1.67
TSPAN3-210ENST00000561277 FAM89AQ96GI7 184 aa25.48■■□□□ 1.67
TSPAN3-210ENST00000561277 NLRP3Q96P20 1036 aa25.48■■□□□ 1.67
TSPAN3-210ENST00000561277 CACNA1FO60840 1977 aa25.48■■□□□ 1.67
TSPAN3-210ENST00000561277 TRIM28Q13263 835 aaKnown RBP25.48■■□□□ 1.67
TSPAN3-210ENST00000561277 SLC10A5Q5PT55 438 aa25.46■■□□□ 1.67
TSPAN3-210ENST00000561277 RASSF7Q02833 373 aa25.45■■□□□ 1.66
TSPAN3-210ENST00000561277 NEXNQ0ZGT2 675 aa25.45■■□□□ 1.66
TSPAN3-210ENST00000561277 TRMT2AQ8IZ69 625 aaKnown RBP25.44■■□□□ 1.66
TSPAN3-210ENST00000561277 CCDC191Q8NCU4 936 aa25.44■■□□□ 1.66
TSPAN3-210ENST00000561277 CWC25Q9NXE8 425 aaPredicted RBP25.44■■□□□ 1.66
TSPAN3-210ENST00000561277 LAMB2P55268 1798 aa25.44■■□□□ 1.66
TSPAN3-210ENST00000561277 DDX60Q8IY21 1712 aaKnown RBP25.44■■□□□ 1.66
TSPAN3-210ENST00000561277 ALDH1B1P30837 517 aa25.44■■□□□ 1.66
TSPAN3-210ENST00000561277 IGKV5-2P06315 115 aa25.43■■□□□ 1.66
TSPAN3-210ENST00000561277 CWF19L2Q2TBE0 894 aaKnown RBP25.42■■□□□ 1.66
TSPAN3-210ENST00000561277 ZBTB38Q8NAP3 1195 aaPredicted RBP25.42■■□□□ 1.66
TSPAN3-210ENST00000561277 DNAAF4Q8WXU2 420 aa25.42■■□□□ 1.66
TSPAN3-210ENST00000561277 RBM17Q96I25 401 aaKnown RBP25.42■■□□□ 1.66
TSPAN3-210ENST00000561277 HOXA10P31260 410 aaPredicted RBP25.41■■□□□ 1.66
TSPAN3-210ENST00000561277 C9orf131Q5VYM1 1079 aa25.41■■□□□ 1.66
TSPAN3-210ENST00000561277 ZNF784Q8NCA9 323 aaPredicted RBP25.41■■□□□ 1.66
TSPAN3-210ENST00000561277 JARID2Q92833 1246 aaPredicted RBP25.41■■□□□ 1.66
TSPAN3-210ENST00000561277 F6X3S4 739 aa25.4■■□□□ 1.66
TSPAN3-210ENST00000561277 NFKBIEO00221 500 aa25.4■■□□□ 1.66
TSPAN3-210ENST00000561277 IRS4O14654 1257 aaPredicted RBP25.4■■□□□ 1.66
TSPAN3-210ENST00000561277 OLFM4Q6UX06 510 aa25.4■■□□□ 1.66
TSPAN3-210ENST00000561277 BCL2L13Q9BXK5 485 aa25.4■■□□□ 1.66
TSPAN3-210ENST00000561277 RNF181Q9P0P0 153 aa25.39■■□□□ 1.66
TSPAN3-210ENST00000561277 NEURL1BA8MQ27 555 aa25.39■■□□□ 1.65
TSPAN3-210ENST00000561277 PCCAP05165 728 aaPredicted RBP25.39■■□□□ 1.65
TSPAN3-210ENST00000561277 SOGA3Q5TF21 947 aa25.39■■□□□ 1.65
TSPAN3-210ENST00000561277 C7orf43Q8WVR3 580 aa25.39■■□□□ 1.65
TSPAN3-210ENST00000561277 SSH1Q8WYL5 1049 aa25.39■■□□□ 1.65
TSPAN3-210ENST00000561277 CRAMP1Q96RY5 1269 aa25.39■■□□□ 1.65
TSPAN3-210ENST00000561277 ABCC4O15439 1325 aa25.38■■□□□ 1.65
TSPAN3-210ENST00000561277 CCDC93Q567U6 631 aa25.38■■□□□ 1.65
TSPAN3-210ENST00000561277 MRPL50Q8N5N7 158 aaKnown RBP25.38■■□□□ 1.65
TSPAN3-210ENST00000561277 FER1L6Q2WGJ9 1857 aa25.38■■□□□ 1.65
TSPAN3-210ENST00000561277 SBF1O95248 1867 aa25.37■■□□□ 1.65
TSPAN3-210ENST00000561277 PPEF1O14829 653 aaPredicted RBP25.36■■□□□ 1.65
TSPAN3-210ENST00000561277 TAOK3Q9H2K8 898 aa25.36■■□□□ 1.65
TSPAN3-210ENST00000561277 PRELPP51888 382 aa25.35■■□□□ 1.65
TSPAN3-210ENST00000561277 DDX46Q7L014 1031 aaKnown RBP25.35■■□□□ 1.65
TSPAN3-210ENST00000561277 SLC51AQ86UW1 340 aa25.35■■□□□ 1.65
TSPAN3-210ENST00000561277 LINS1Q8NG48 757 aa25.35■■□□□ 1.65
TSPAN3-210ENST00000561277 ZNF526Q8TF50 670 aaPredicted RBP25.35■■□□□ 1.65
TSPAN3-210ENST00000561277 SMC4Q9NTJ3 1288 aa25.35■■□□□ 1.65
TSPAN3-210ENST00000561277 LMNB1P20700 586 aa25.35■■□□□ 1.65
TSPAN3-210ENST00000561277 CT47B1P0C2W7 299 aaPredicted RBP25.33■■□□□ 1.65
TSPAN3-210ENST00000561277 HSP90B1P14625 803 aaKnown RBP25.33■■□□□ 1.65
TSPAN3-210ENST00000561277 GCKRQ14397 625 aa25.33■■□□□ 1.65
TSPAN3-210ENST00000561277 SF3B3Q15393 1217 aaKnown RBP25.33■■□□□ 1.65
TSPAN3-210ENST00000561277 ALDH1L2Q3SY69 923 aa25.33■■□□□ 1.65
TSPAN3-210ENST00000561277 SLC4A10Q6U841 1118 aa25.33■■□□□ 1.65
TSPAN3-210ENST00000561277 UBE3BQ7Z3V4 1068 aa25.33■■□□□ 1.65
TSPAN3-210ENST00000561277 TAF1P21675 1872 aa25.32■■□□□ 1.64
TSPAN3-210ENST00000561277 GRAPQ13588 217 aa25.32■■□□□ 1.64
TSPAN3-210ENST00000561277 GRAPLQ8TC17 118 aaPredicted RBP25.32■■□□□ 1.64
TSPAN3-210ENST00000561277 ZBED9Q6R2W3 1325 aa25.32■■□□□ 1.64
TSPAN3-210ENST00000561277 CDHR2Q9BYE9 1310 aa25.32■■□□□ 1.64
TSPAN3-210ENST00000561277 LTBP3Q9NS15 1303 aa25.32■■□□□ 1.64
TSPAN3-210ENST00000561277 CCDC88AQ3V6T2 1871 aa25.32■■□□□ 1.64
TSPAN3-210ENST00000561277 PDE8AO60658 829 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms