RNA–Protein interactions for RNA: ENST00000560867.1

HMG20A-211, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-211ENST00000560867 ERCC3P19447 782 aa9.17□□□□□ -0.94
HMG20A-211ENST00000560867 IRF7Q92985 503 aa9.17□□□□□ -0.94
HMG20A-211ENST00000560867 GTPBP3Q969Y2 492 aaKnown RBP9.17□□□□□ -0.94
HMG20A-211ENST00000560867 RBCK1Q9BYM8 510 aa9.17□□□□□ -0.94
HMG20A-211ENST00000560867 ANO2Q9NQ90 1003 aa9.17□□□□□ -0.94
HMG20A-211ENST00000560867 BRPF3Q9ULD4 1205 aa9.17□□□□□ -0.94
HMG20A-211ENST00000560867 KCNH4Q9UQ05 1017 aa9.17□□□□□ -0.94
HMG20A-211ENST00000560867 OPLAHO14841 1288 aa9.16□□□□□ -0.94
HMG20A-211ENST00000560867 EGFRP00533 1210 aa9.16□□□□□ -0.94
HMG20A-211ENST00000560867 MAPTP10636 758 aaKnown RBP9.16□□□□□ -0.94
HMG20A-211ENST00000560867 PDE3BQ13370 1112 aa9.16□□□□□ -0.94
HMG20A-211ENST00000560867 TMCO4Q5TGY1 634 aa9.16□□□□□ -0.94
HMG20A-211ENST00000560867 VWA5B2Q8N398 1253 aa9.16□□□□□ -0.94
HMG20A-211ENST00000560867 MARK1Q9P0L2 795 aa9.16□□□□□ -0.94
HMG20A-211ENST00000560867 KHNYNO15037 678 aaKnown RBP9.15□□□□□ -0.94
HMG20A-211ENST00000560867 BNIP3LO60238 219 aa9.15□□□□□ -0.94
HMG20A-211ENST00000560867 FZD6O60353 706 aa9.15□□□□□ -0.94
HMG20A-211ENST00000560867 CCDC27Q2M243 656 aa9.15□□□□□ -0.94
HMG20A-211ENST00000560867 KLRG1Q96E93 195 aa9.15□□□□□ -0.94
HMG20A-211ENST00000560867 AVENQ9NQS1 362 aaPredicted RBP9.15□□□□□ -0.94
HMG20A-211ENST00000560867 NSFL1CQ9UNZ2 370 aaKnown RBP9.15□□□□□ -0.94
HMG20A-211ENST00000560867 ZBTB39O15060 712 aa9.14□□□□□ -0.95
HMG20A-211ENST00000560867 FGFR3P22607 806 aa9.14□□□□□ -0.95
HMG20A-211ENST00000560867 NFX1Q12986 1120 aaKnown RBP9.14□□□□□ -0.95
HMG20A-211ENST00000560867 NEUROD1Q13562 356 aa9.14□□□□□ -0.95
HMG20A-211ENST00000560867 AAMPQ13685 434 aa9.14□□□□□ -0.95
HMG20A-211ENST00000560867 FAM26DQ5JW98 314 aa9.14□□□□□ -0.95
HMG20A-211ENST00000560867 RTCBQ9Y3I0 505 aaKnown RBP9.14□□□□□ -0.95
HMG20A-211ENST00000560867 DCDC2BA2VCK2 349 aa9.13□□□□□ -0.95
HMG20A-211ENST00000560867 PDGFAP04085 211 aa9.13□□□□□ -0.95
HMG20A-211ENST00000560867 PDE12Q6L8Q7 609 aaKnown RBP9.13□□□□□ -0.95
HMG20A-211ENST00000560867 ZSCAN29Q8IWY8 852 aaPredicted RBP9.13□□□□□ -0.95
HMG20A-211ENST00000560867 GJD3Q8N144 294 aa9.13□□□□□ -0.95
HMG20A-211ENST00000560867 TTC16Q8NEE8 873 aa9.13□□□□□ -0.95
HMG20A-211ENST00000560867 ABHD17AQ96GS6 310 aa9.13□□□□□ -0.95
HMG20A-211ENST00000560867 DMRTB1Q96MA1 342 aa9.13□□□□□ -0.95
HMG20A-211ENST00000560867 MAP2K3P46734 347 aa9.12□□□□□ -0.95
HMG20A-211ENST00000560867 MARSP56192 900 aaKnown RBP9.12□□□□□ -0.95
HMG20A-211ENST00000560867 XKR5Q6UX68 686 aa9.12□□□□□ -0.95
HMG20A-211ENST00000560867 EDEM1Q92611 657 aa9.12□□□□□ -0.95
HMG20A-211ENST00000560867 MBIPQ9NS73 344 aa9.12□□□□□ -0.95
HMG20A-211ENST00000560867 CCINQ13939 588 aa9.11□□□□□ -0.95
HMG20A-211ENST00000560867 RGL4Q8IZJ4 473 aa9.11□□□□□ -0.95
HMG20A-211ENST00000560867 GPR152Q8TDT2 470 aa9.11□□□□□ -0.95
HMG20A-211ENST00000560867 FAM129BQ96TA1 746 aa9.11□□□□□ -0.95
HMG20A-211ENST00000560867 KCNMB2Q9Y691 235 aa9.11□□□□□ -0.95
HMG20A-211ENST00000560867 NEFLP07196 543 aa9.1□□□□□ -0.95
HMG20A-211ENST00000560867 MX2P20592 715 aa9.1□□□□□ -0.95
HMG20A-211ENST00000560867 DNM1Q05193 864 aaKnown RBP9.1□□□□□ -0.95
HMG20A-211ENST00000560867 COL19A1Q14993 1142 aa9.1□□□□□ -0.95
HMG20A-211ENST00000560867 ALKBH8Q96BT7 664 aaKnown RBP9.1□□□□□ -0.95
HMG20A-211ENST00000560867 NUDT16Q96DE0 195 aaKnown RBP9.1□□□□□ -0.95
HMG20A-211ENST00000560867 ASB16Q96NS5 453 aa9.1□□□□□ -0.95
HMG20A-211ENST00000560867 POLIQ9UNA4 740 aa9.1□□□□□ -0.95
HMG20A-211ENST00000560867 CCDC9Q9Y3X0 531 aaKnown RBP9.1□□□□□ -0.95
HMG20A-211ENST00000560867 XYLBO75191 536 aa9.09□□□□□ -0.95
HMG20A-211ENST00000560867 MAPK1P28482 360 aa9.09□□□□□ -0.95
HMG20A-211ENST00000560867 SPEM2Q0P670 501 aa9.09□□□□□ -0.95
HMG20A-211ENST00000560867 SFSWAPQ12872 951 aaKnown RBP9.09□□□□□ -0.95
HMG20A-211ENST00000560867 ATCAYQ86WG3 371 aa9.09□□□□□ -0.95
HMG20A-211ENST00000560867 UBAP1LF5GYI3 381 aa9.08□□□□□ -0.96
HMG20A-211ENST00000560867 MAP3K6O95382 1288 aa9.08□□□□□ -0.96
HMG20A-211ENST00000560867 GRNP28799 593 aaKnown RBP9.08□□□□□ -0.96
HMG20A-211ENST00000560867 GAS6Q14393 721 aa9.08□□□□□ -0.96
HMG20A-211ENST00000560867 NLRP13Q86W25 1043 aa9.08□□□□□ -0.96
HMG20A-211ENST00000560867 CMTR1Q8N1G2 835 aaKnown RBP9.08□□□□□ -0.96
HMG20A-211ENST00000560867 GSX2Q9BZM3 304 aa9.08□□□□□ -0.96
HMG20A-211ENST00000560867 CCDC87Q9NVE4 849 aa9.08□□□□□ -0.96
HMG20A-211ENST00000560867 GPR25O00155 361 aa9.07□□□□□ -0.96
HMG20A-211ENST00000560867 ARAFP10398 606 aa9.07□□□□□ -0.96
HMG20A-211ENST00000560867 BMP4P12644 408 aa9.07□□□□□ -0.96
HMG20A-211ENST00000560867 CD33P20138 364 aa9.07□□□□□ -0.96
HMG20A-211ENST00000560867 VEGFBP49765 207 aa9.07□□□□□ -0.96
HMG20A-211ENST00000560867 SRSF11Q05519 484 aaKnown RBP9.07□□□□□ -0.96
HMG20A-211ENST00000560867 ZNF468Q5VIY5 522 aaPredicted RBP9.07□□□□□ -0.96
HMG20A-211ENST00000560867 WFS1O76024 890 aa9.06□□□□□ -0.96
HMG20A-211ENST00000560867 HOXD8P13378 290 aaPredicted RBP9.06□□□□□ -0.96
HMG20A-211ENST00000560867 TRIP4Q15650 581 aaPredicted RBP9.06□□□□□ -0.96
HMG20A-211ENST00000560867 PCSK7Q16549 785 aa9.06□□□□□ -0.96
HMG20A-211ENST00000560867 PNMA5Q96PV4 448 aa9.06□□□□□ -0.96
HMG20A-211ENST00000560867 STRN4Q9NRL3 753 aa9.06□□□□□ -0.96
HMG20A-211ENST00000560867 ERBB4Q15303 1308 aa9.05□□□□□ -0.96
HMG20A-211ENST00000560867 SIN3BO75182 1162 aa9.05□□□□□ -0.96
HMG20A-211ENST00000560867 SOX18P35713 384 aa9.05□□□□□ -0.96
HMG20A-211ENST00000560867 MFAP1P55081 439 aaKnown RBP9.05□□□□□ -0.96
HMG20A-211ENST00000560867 FGD1P98174 961 aa9.05□□□□□ -0.96
HMG20A-211ENST00000560867 GPR161Q8N6U8 529 aaKnown RBP9.05□□□□□ -0.96
HMG20A-211ENST00000560867 SNX29Q8TEQ0 813 aa9.05□□□□□ -0.96
HMG20A-211ENST00000560867 COL25A1Q9BXS0 654 aaPredicted RBP9.05□□□□□ -0.96
HMG20A-211ENST00000560867 LRRC4BQ9NT99 713 aa9.05□□□□□ -0.96
HMG20A-211ENST00000560867 GDF2Q9UK05 429 aaPredicted RBP9.05□□□□□ -0.96
HMG20A-211ENST00000560867 HCN2Q9UL51 889 aa9.05□□□□□ -0.96
HMG20A-211ENST00000560867 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.05□□□□□ -0.96
HMG20A-211ENST00000560867 IGHA2P01877 340 aa9.04□□□□□ -0.96
HMG20A-211ENST00000560867 CTBSQ01459 385 aa9.04□□□□□ -0.96
HMG20A-211ENST00000560867 DNAJC14Q6Y2X3 702 aaPredicted RBP9.04□□□□□ -0.96
HMG20A-211ENST00000560867 TMC7Q7Z402 723 aa9.04□□□□□ -0.96
HMG20A-211ENST00000560867 ZNF438Q7Z4V0 828 aa9.04□□□□□ -0.96
HMG20A-211ENST00000560867 PMEPA1Q969W9 287 aa9.04□□□□□ -0.96
HMG20A-211ENST00000560867 PRR12Q9ULL5 1215 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms