RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 TP53INP1Q96A56 240 aa8.99□□□□□ -0.97
PSMA4-221ENST00000560842 ANKIB1Q9P2G1 1089 aa8.99□□□□□ -0.97
PSMA4-221ENST00000560842 KCNH4Q9UQ05 1017 aa8.99□□□□□ -0.97
PSMA4-221ENST00000560842 SKIP12755 728 aa8.98□□□□□ -0.97
PSMA4-221ENST00000560842 RAC1P63000 192 aa8.98□□□□□ -0.97
PSMA4-221ENST00000560842 SHISA2Q6UWI4 295 aa8.98□□□□□ -0.97
PSMA4-221ENST00000560842 TNS4Q8IZW8 715 aa8.98□□□□□ -0.97
PSMA4-221ENST00000560842 CEP63Q96MT8 703 aa8.98□□□□□ -0.97
PSMA4-221ENST00000560842 SSBP4Q9BWG4 385 aaPredicted RBP8.98□□□□□ -0.97
PSMA4-221ENST00000560842 PALM3A6NDB9 673 aaPredicted RBP8.97□□□□□ -0.97
PSMA4-221ENST00000560842 ARID3CA6NKF2 412 aa8.97□□□□□ -0.97
PSMA4-221ENST00000560842 USP17L5A8MUK1 530 aa8.97□□□□□ -0.97
PSMA4-221ENST00000560842 PSME1Q06323 249 aa8.97□□□□□ -0.97
PSMA4-221ENST00000560842 ILDR2Q71H61 639 aa8.97□□□□□ -0.97
PSMA4-221ENST00000560842 GOLGA2P5Q9HBQ8 144 aa8.97□□□□□ -0.97
PSMA4-221ENST00000560842 TFIP11Q9UBB9 837 aaKnown RBP8.97□□□□□ -0.97
PSMA4-221ENST00000560842 MAFBQ9Y5Q3 323 aaPredicted RBP8.97□□□□□ -0.97
PSMA4-221ENST00000560842 SFI1A8K8P3 1242 aa8.96□□□□□ -0.98
PSMA4-221ENST00000560842 CFAP70Q5T0N1 1121 aa8.96□□□□□ -0.98
PSMA4-221ENST00000560842 TYRO3Q06418 890 aa8.95□□□□□ -0.98
PSMA4-221ENST00000560842 POTEAQ6S8J7 498 aa8.95□□□□□ -0.98
PSMA4-221ENST00000560842 BHMTQ93088 406 aa8.95□□□□□ -0.98
PSMA4-221ENST00000560842 JPH1Q9HDC5 661 aaPredicted RBP8.95□□□□□ -0.98
PSMA4-221ENST00000560842 SERPINA10Q9UK55 444 aa8.95□□□□□ -0.98
PSMA4-221ENST00000560842 USP17L3A6NCW0 530 aa8.94□□□□□ -0.98
PSMA4-221ENST00000560842 USP17L4A6NCW7 530 aa8.94□□□□□ -0.98
PSMA4-221ENST00000560842 HIRAP54198 1017 aaPredicted RBP8.94□□□□□ -0.98
PSMA4-221ENST00000560842 NCOA4Q13772 614 aa8.94□□□□□ -0.98
PSMA4-221ENST00000560842 USP17L2Q6R6M4 530 aa8.94□□□□□ -0.98
PSMA4-221ENST00000560842 USP17L1Q7RTZ2 530 aa8.94□□□□□ -0.98
PSMA4-221ENST00000560842 FMR1NBQ8N0W7 255 aaPredicted RBP8.94□□□□□ -0.98
PSMA4-221ENST00000560842 HSH2DQ96JZ2 352 aa8.94□□□□□ -0.98
PSMA4-221ENST00000560842 UBE2OQ9C0C9 1292 aaKnown RBP8.94□□□□□ -0.98
PSMA4-221ENST00000560842 SLC6A14Q9UN76 642 aa8.94□□□□□ -0.98
PSMA4-221ENST00000560842 AFF1P51825 1210 aaKnown RBP8.93□□□□□ -0.98
PSMA4-221ENST00000560842 PSMA6P60900 246 aaKnown RBP8.93□□□□□ -0.98
PSMA4-221ENST00000560842 SRPK2P78362 688 aaKnown RBP8.93□□□□□ -0.98
PSMA4-221ENST00000560842 ZNF280CQ8ND82 737 aa8.93□□□□□ -0.98
PSMA4-221ENST00000560842 NUDT8Q8WV74 236 aa8.93□□□□□ -0.98
PSMA4-221ENST00000560842 SUSD3Q96L08 255 aa8.93□□□□□ -0.98
PSMA4-221ENST00000560842 EFCC1Q9HA90 598 aa8.93□□□□□ -0.98
PSMA4-221ENST00000560842 USP21Q9UK80 565 aa8.93□□□□□ -0.98
PSMA4-221ENST00000560842 HCN4Q9Y3Q4 1203 aa8.93□□□□□ -0.98
PSMA4-221ENST00000560842 KANK4Q5T7N3 995 aaPredicted RBP8.92□□□□□ -0.98
PSMA4-221ENST00000560842 PHACTR1Q9C0D0 580 aa8.92□□□□□ -0.98
PSMA4-221ENST00000560842 RNF112Q9ULX5 631 aa8.92□□□□□ -0.98
PSMA4-221ENST00000560842 TBC1D8BQ0IIM8 1120 aa8.91□□□□□ -0.98
PSMA4-221ENST00000560842 DMRTC2Q8IXT2 367 aaPredicted RBP8.91□□□□□ -0.98
PSMA4-221ENST00000560842 CCDC82Q8N4S0 544 aa8.91□□□□□ -0.98
PSMA4-221ENST00000560842 IGFLR1Q9H665 355 aa8.91□□□□□ -0.98
PSMA4-221ENST00000560842 SUPT5HO00267 1087 aaKnown RBP8.9□□□□□ -0.98
PSMA4-221ENST00000560842 DEPDC4Q8N2C3 294 aa8.9□□□□□ -0.98
PSMA4-221ENST00000560842 CCDC97Q96F63 343 aaPredicted RBP8.9□□□□□ -0.98
PSMA4-221ENST00000560842 TSPAN10Q9H1Z9 355 aaPredicted RBP8.9□□□□□ -0.98
PSMA4-221ENST00000560842 CHMP3Q9Y3E7 222 aa8.9□□□□□ -0.98
PSMA4-221ENST00000560842 ZBTB7BO15156 539 aaPredicted RBP8.89□□□□□ -0.99
PSMA4-221ENST00000560842 PSAPL1Q6NUJ1 521 aa8.89□□□□□ -0.99
PSMA4-221ENST00000560842 KRTAP4-8A0A0G2JLE6 195 aa8.88□□□□□ -0.99
PSMA4-221ENST00000560842 RGS9O75916 674 aaPredicted RBP8.88□□□□□ -0.99
PSMA4-221ENST00000560842 LMOD1P29536 600 aaPredicted RBP8.88□□□□□ -0.99
PSMA4-221ENST00000560842 MCTP1Q6DN14 999 aa8.88□□□□□ -0.99
PSMA4-221ENST00000560842 TRIM50Q86XT4 487 aa8.88□□□□□ -0.99
PSMA4-221ENST00000560842 WFDC12Q8WWY7 111 aa8.88□□□□□ -0.99
PSMA4-221ENST00000560842 DNAJB12Q9NXW2 375 aaKnown RBP8.88□□□□□ -0.99
PSMA4-221ENST00000560842 MKRN1Q9UHC7 482 aaKnown RBP8.88□□□□□ -0.99
PSMA4-221ENST00000560842 BTLAQ7Z6A9 289 aa8.87□□□□□ -0.99
PSMA4-221ENST00000560842 DTWD1Q8N5C7 304 aa8.87□□□□□ -0.99
PSMA4-221ENST00000560842 TPCN2Q8NHX9 752 aa8.87□□□□□ -0.99
PSMA4-221ENST00000560842 GSX2Q9BZM3 304 aa8.87□□□□□ -0.99
PSMA4-221ENST00000560842 NAGPAQ9UK23 515 aa8.87□□□□□ -0.99
PSMA4-221ENST00000560842 DKK1O94907 266 aa8.86□□□□□ -0.99
PSMA4-221ENST00000560842 CLDN10P78369 228 aa8.86□□□□□ -0.99
PSMA4-221ENST00000560842 CCDC102BQ68D86 513 aa8.86□□□□□ -0.99
PSMA4-221ENST00000560842 MSL1Q68DK7 614 aa8.86□□□□□ -0.99
PSMA4-221ENST00000560842 FBXO11Q86XK2 927 aa8.86□□□□□ -0.99
PSMA4-221ENST00000560842 M0R2N6 131 aa8.85□□□□□ -0.99
PSMA4-221ENST00000560842 IREB2P48200 963 aaKnown RBP8.85□□□□□ -0.99
PSMA4-221ENST00000560842 ATP1A2P50993 1020 aa8.85□□□□□ -0.99
PSMA4-221ENST00000560842 LARGE2Q8N3Y3 721 aa8.85□□□□□ -0.99
PSMA4-221ENST00000560842 VRTNQ9H8Y1 702 aa8.85□□□□□ -0.99
PSMA4-221ENST00000560842 KIAA1024Q9UPX6 916 aa8.85□□□□□ -0.99
PSMA4-221ENST00000560842 FAM196BA6NMK8 535 aa8.84□□□□□ -0.99
PSMA4-221ENST00000560842 NOS3P29474 1203 aa8.84□□□□□ -0.99
PSMA4-221ENST00000560842 HIF1AQ16665 826 aa8.84□□□□□ -0.99
PSMA4-221ENST00000560842 ALDH16A1Q8IZ83 802 aa8.84□□□□□ -0.99
PSMA4-221ENST00000560842 SIX5Q8N196 739 aa8.84□□□□□ -0.99
PSMA4-221ENST00000560842 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.84□□□□□ -0.99
PSMA4-221ENST00000560842 COL17A1Q9UMD9 1497 aaPredicted RBP8.83□□□□□ -1
PSMA4-221ENST00000560842 PTK7Q13308 1070 aa8.83□□□□□ -1
PSMA4-221ENST00000560842 GRIK5Q16478 980 aa8.83□□□□□ -1
PSMA4-221ENST00000560842 SLC51AQ86UW1 340 aa8.83□□□□□ -1
PSMA4-221ENST00000560842 OGFOD1Q8N543 542 aa8.83□□□□□ -1
PSMA4-221ENST00000560842 PNMA5Q96PV4 448 aa8.83□□□□□ -1
PSMA4-221ENST00000560842 CCINQ13939 588 aa8.82□□□□□ -1
PSMA4-221ENST00000560842 IGF2-ASQ6U949 168 aa8.82□□□□□ -1
PSMA4-221ENST00000560842 PRR23CQ6ZRP0 262 aa8.82□□□□□ -1
PSMA4-221ENST00000560842 PBXIP1Q96AQ6 731 aa8.82□□□□□ -1
PSMA4-221ENST00000560842 FRRS1LQ9P0K9 344 aa8.82□□□□□ -1
PSMA4-221ENST00000560842 C21orf2O43822 256 aa8.81□□□□□ -1
PSMA4-221ENST00000560842 PPP1R12BO60237 982 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms