RNA–Protein interactions for RNA: ENST00000560808.1

NEO1-211, Transcript of neogenin 1, humanhuman

TSL 3

Gene NEO1, Length 1,046 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-211ENST00000560808 ABCC12Q96J65 1359 aa12.56□□□□□ -0.4
NEO1-211ENST00000560808 TMEM88BA6NKF7 163 aa12.56□□□□□ -0.4
NEO1-211ENST00000560808 EIF6P56537 245 aaKnown RBP12.56□□□□□ -0.4
NEO1-211ENST00000560808 PDIA6Q15084 440 aa12.56□□□□□ -0.4
NEO1-211ENST00000560808 RALBP1Q15311 655 aa12.56□□□□□ -0.4
NEO1-211ENST00000560808 CNTROBQ8N137 903 aa12.56□□□□□ -0.4
NEO1-211ENST00000560808 NLRP3Q96P20 1036 aa12.56□□□□□ -0.4
NEO1-211ENST00000560808 UTP14AQ9BVJ6 771 aaKnown RBP12.56□□□□□ -0.4
NEO1-211ENST00000560808 TMX4Q9H1E5 349 aaPredicted RBP12.56□□□□□ -0.4
NEO1-211ENST00000560808 ERBB4Q15303 1308 aa12.56□□□□□ -0.4
NEO1-211ENST00000560808 VIRMAQ69YN4 1812 aaKnown RBP12.55□□□□□ -0.4
NEO1-211ENST00000560808 NTSR2O95665 410 aa12.55□□□□□ -0.4
NEO1-211ENST00000560808 ANXA1P04083 346 aa12.55□□□□□ -0.4
NEO1-211ENST00000560808 TMPOP42166 694 aaKnown RBP12.55□□□□□ -0.4
NEO1-211ENST00000560808 PROSER3Q2NL68 480 aa12.55□□□□□ -0.4
NEO1-211ENST00000560808 PARP10Q53GL7 1025 aa12.55□□□□□ -0.4
NEO1-211ENST00000560808 SLC10A5Q5PT55 438 aa12.55□□□□□ -0.4
NEO1-211ENST00000560808 MAP1SQ66K74 1059 aaPredicted RBP12.55□□□□□ -0.4
NEO1-211ENST00000560808 C3orf67Q6ZVT6 689 aa12.55□□□□□ -0.4
NEO1-211ENST00000560808 LARGE2Q8N3Y3 721 aa12.55□□□□□ -0.4
NEO1-211ENST00000560808 NECTIN2Q92692 538 aa12.55□□□□□ -0.4
NEO1-211ENST00000560808 BABAM1Q9NWV8 329 aa12.55□□□□□ -0.4
NEO1-211ENST00000560808 RNF123Q5XPI4 1314 aa12.55□□□□□ -0.4
NEO1-211ENST00000560808 PPEF1O14829 653 aaPredicted RBP12.54□□□□□ -0.4
NEO1-211ENST00000560808 LMOD3Q0VAK6 560 aa12.54□□□□□ -0.4
NEO1-211ENST00000560808 AIMP1Q12904 312 aaKnown RBP12.54□□□□□ -0.4
NEO1-211ENST00000560808 NEUROD2Q15784 382 aa12.54□□□□□ -0.4
NEO1-211ENST00000560808 COPS6Q7L5N1 327 aa12.54□□□□□ -0.4
NEO1-211ENST00000560808 LRP10Q7Z4F1 713 aa12.54□□□□□ -0.4
NEO1-211ENST00000560808 PCNTO95613 3336 aa12.54□□□□□ -0.4
NEO1-211ENST00000560808 COL11A2P13942 1736 aaPredicted RBP12.54□□□□□ -0.4
NEO1-211ENST00000560808 LMOD1P29536 600 aaPredicted RBP12.53□□□□□ -0.4
NEO1-211ENST00000560808 VEGFBP49765 207 aa12.53□□□□□ -0.4
NEO1-211ENST00000560808 SLC51AQ86UW1 340 aa12.53□□□□□ -0.4
NEO1-211ENST00000560808 ATP6V0A2Q9Y487 856 aa12.53□□□□□ -0.4
NEO1-211ENST00000560808 FER1L6Q2WGJ9 1857 aa12.53□□□□□ -0.4
NEO1-211ENST00000560808 BBOX1O75936 387 aa12.52□□□□□ -0.41
NEO1-211ENST00000560808 EPS15P42566 896 aa12.52□□□□□ -0.41
NEO1-211ENST00000560808 DDX10Q13206 875 aaKnown RBP12.52□□□□□ -0.41
NEO1-211ENST00000560808 NIM1KQ8IY84 436 aa12.52□□□□□ -0.41
NEO1-211ENST00000560808 CCDC146Q8IYE0 955 aa12.52□□□□□ -0.41
NEO1-211ENST00000560808 XAGE3Q8WTP9 111 aa12.52□□□□□ -0.41
NEO1-211ENST00000560808 LAS1LQ9Y4W2 734 aaKnown RBP12.52□□□□□ -0.41
NEO1-211ENST00000560808 CNTNAP1P78357 1384 aa12.52□□□□□ -0.41
NEO1-211ENST00000560808 IBTKQ9P2D0 1353 aaPredicted RBP12.52□□□□□ -0.41
NEO1-211ENST00000560808 CHL1O00533 1208 aa12.51□□□□□ -0.41
NEO1-211ENST00000560808 PPIP5K2O43314 1243 aa12.51□□□□□ -0.41
NEO1-211ENST00000560808 HCLS1P14317 486 aaPredicted RBP12.51□□□□□ -0.41
NEO1-211ENST00000560808 TCIRG1Q13488 830 aa12.51□□□□□ -0.41
NEO1-211ENST00000560808 DEFB115Q30KQ5 88 aa12.51□□□□□ -0.41
NEO1-211ENST00000560808 HSP90AB3PQ58FF7 597 aa12.51□□□□□ -0.41
NEO1-211ENST00000560808 NLRP10Q86W26 655 aa12.51□□□□□ -0.41
NEO1-211ENST00000560808 TRMT112Q9UI30 125 aaKnown RBP12.51□□□□□ -0.41
NEO1-211ENST00000560808 TIAM2Q8IVF5 1701 aa12.51□□□□□ -0.41
NEO1-211ENST00000560808 FOXN1O15353 648 aa12.5□□□□□ -0.41
NEO1-211ENST00000560808 SCNN1DP51172 638 aa12.5□□□□□ -0.41
NEO1-211ENST00000560808 AOC3Q16853 763 aa12.5□□□□□ -0.41
NEO1-211ENST00000560808 KRT24Q2M2I5 525 aa12.5□□□□□ -0.41
NEO1-211ENST00000560808 SP8Q8IXZ3 490 aa12.5□□□□□ -0.41
NEO1-211ENST00000560808 SUPT20HQ8NEM7 779 aa12.5□□□□□ -0.41
NEO1-211ENST00000560808 ZNF428Q96B54 188 aa12.5□□□□□ -0.41
NEO1-211ENST00000560808 AIDAQ96BJ3 306 aa12.5□□□□□ -0.41
NEO1-211ENST00000560808 VPS33BQ9H267 617 aa12.5□□□□□ -0.41
NEO1-211ENST00000560808 DDX21Q9NR30 783 aaKnown RBP eCLIP12.5□□□□□ -0.41
NEO1-211ENST00000560808 ABT1Q9ULW3 272 aaKnown RBP12.5□□□□□ -0.41
NEO1-211ENST00000560808 BCORQ6W2J9 1755 aa12.5□□□□□ -0.41
NEO1-211ENST00000560808 CCDC88AQ3V6T2 1871 aa12.5□□□□□ -0.41
NEO1-211ENST00000560808 SNED1Q8TER0 1413 aa12.49□□□□□ -0.41
NEO1-211ENST00000560808 CXCL9Q07325 125 aa12.49□□□□□ -0.41
NEO1-211ENST00000560808 DPP8Q6V1X1 898 aaPredicted RBP12.49□□□□□ -0.41
NEO1-211ENST00000560808 USP50Q70EL3 339 aaPredicted RBP12.49□□□□□ -0.41
NEO1-211ENST00000560808 DDX46Q7L014 1031 aaKnown RBP12.49□□□□□ -0.41
NEO1-211ENST00000560808 MPNDQ8N594 471 aa12.49□□□□□ -0.41
NEO1-211ENST00000560808 RUNDC1Q96C34 613 aa12.49□□□□□ -0.41
NEO1-211ENST00000560808 ZNRF3Q9ULT6 936 aa12.49□□□□□ -0.41
NEO1-211ENST00000560808 TRIM35Q9UPQ4 493 aa12.49□□□□□ -0.41
NEO1-211ENST00000560808 RIC1Q4ADV7 1423 aa12.48□□□□□ -0.41
NEO1-211ENST00000560808 ABCC4O15439 1325 aa12.48□□□□□ -0.41
NEO1-211ENST00000560808 RASSF10A6NK89 507 aa12.48□□□□□ -0.41
NEO1-211ENST00000560808 CTCFP49711 727 aaPredicted RBP12.48□□□□□ -0.41
NEO1-211ENST00000560808 WDR43Q15061 677 aaKnown RBP eCLIP12.48□□□□□ -0.41
NEO1-211ENST00000560808 ANKRD13DQ6ZTN6 518 aa12.48□□□□□ -0.41
NEO1-211ENST00000560808 RTFDC1Q9BY42 306 aaPredicted RBP12.48□□□□□ -0.41
NEO1-211ENST00000560808 WBP1LQ9NX94 342 aa12.48□□□□□ -0.41
NEO1-211ENST00000560808 ADAMTS8Q9UP79 889 aa12.48□□□□□ -0.41
NEO1-211ENST00000560808 SH3TC1Q8TE82 1336 aa12.47□□□□□ -0.41
NEO1-211ENST00000560808 MYBBP1AQ9BQG0 1328 aaKnown RBP12.47□□□□□ -0.41
NEO1-211ENST00000560808 FMR1Q06787 632 aaKnown RBP eCLIP12.47□□□□□ -0.41
NEO1-211ENST00000560808 PRDM10Q9NQV6 1147 aa12.47□□□□□ -0.41
NEO1-211ENST00000560808 GPRC5DQ9NZD1 345 aa12.47□□□□□ -0.41
NEO1-211ENST00000560808 CHPF2Q9P2E5 772 aa12.47□□□□□ -0.41
NEO1-211ENST00000560808 WDR33Q9C0J8 1336 aaKnown RBP12.46□□□□□ -0.41
NEO1-211ENST00000560808 TRAF5O00463 557 aa12.46□□□□□ -0.41
NEO1-211ENST00000560808 GRAPQ13588 217 aa12.46□□□□□ -0.41
NEO1-211ENST00000560808 HDGFL1Q5TGJ6 251 aa12.46□□□□□ -0.41
NEO1-211ENST00000560808 CST9Q5W186 159 aa12.46□□□□□ -0.41
NEO1-211ENST00000560808 PLBD2Q8NHP8 589 aa12.46□□□□□ -0.41
NEO1-211ENST00000560808 GRAPLQ8TC17 118 aaPredicted RBP12.46□□□□□ -0.41
NEO1-211ENST00000560808 ADARB2Q9NS39 739 aaKnown RBP12.46□□□□□ -0.41
NEO1-211ENST00000560808 DBF4Q9UBU7 674 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms