RNA–Protein interactions for RNA: ENST00000560563.1

ACTC1-203, Transcript of actin, alpha, cardiac muscle 1, humanhuman

TSL 2

Gene ACTC1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTC1-203ENST00000560563 KCPQ6ZWJ8 1503 aa10.7□□□□□ -0.7
ACTC1-203ENST00000560563 PTCD1O75127 700 aaKnown RBP10.7□□□□□ -0.7
ACTC1-203ENST00000560563 TRIM37O94972 964 aa10.7□□□□□ -0.7
ACTC1-203ENST00000560563 HOXB7P09629 217 aa10.7□□□□□ -0.7
ACTC1-203ENST00000560563 E2F4Q16254 413 aa10.7□□□□□ -0.7
ACTC1-203ENST00000560563 C6orf132Q5T0Z8 1188 aa10.7□□□□□ -0.7
ACTC1-203ENST00000560563 ZNF428Q96B54 188 aa10.7□□□□□ -0.7
ACTC1-203ENST00000560563 PALLDQ8WX93 1383 aa10.69□□□□□ -0.7
ACTC1-203ENST00000560563 SNRPA1P09661 255 aaKnown RBP10.69□□□□□ -0.7
ACTC1-203ENST00000560563 NBR1Q14596 966 aa10.69□□□□□ -0.7
ACTC1-203ENST00000560563 THSD4Q6ZMP0 1018 aa10.69□□□□□ -0.7
ACTC1-203ENST00000560563 VSIG10Q8N0Z9 540 aa10.69□□□□□ -0.7
ACTC1-203ENST00000560563 RCAN3Q9UKA8 241 aa10.69□□□□□ -0.7
ACTC1-203ENST00000560563 SBF2Q86WG5 1849 aa10.69□□□□□ -0.7
ACTC1-203ENST00000560563 UBR2Q8IWV8 1755 aa10.68□□□□□ -0.7
ACTC1-203ENST00000560563 PRAMEF22A3QJZ6 481 aa10.68□□□□□ -0.7
ACTC1-203ENST00000560563 RARSP54136 660 aaKnown RBP10.68□□□□□ -0.7
ACTC1-203ENST00000560563 SLC4A9Q96Q91 983 aa10.68□□□□□ -0.7
ACTC1-203ENST00000560563 KIAA1468Q9P260 1216 aa10.68□□□□□ -0.7
ACTC1-203ENST00000560563 RABGEF1Q9UJ41 708 aa10.68□□□□□ -0.7
ACTC1-203ENST00000560563 LOC102724428A0A0B4J2F2 783 aa10.67□□□□□ -0.7
ACTC1-203ENST00000560563 SIK1P57059 783 aa10.67□□□□□ -0.7
ACTC1-203ENST00000560563 ALDH1L2Q3SY69 923 aa10.67□□□□□ -0.7
ACTC1-203ENST00000560563 TEX13AQ9BXU3 409 aaPredicted RBP10.67□□□□□ -0.7
ACTC1-203ENST00000560563 CHMP4AQ9BY43 222 aa10.67□□□□□ -0.7
ACTC1-203ENST00000560563 USP16Q9Y5T5 823 aa10.67□□□□□ -0.7
ACTC1-203ENST00000560563 BTAF1O14981 1849 aa10.67□□□□□ -0.7
ACTC1-203ENST00000560563 KAT6BQ8WYB5 2073 aa10.66□□□□□ -0.7
ACTC1-203ENST00000560563 MAP3K7O43318 606 aa10.66□□□□□ -0.7
ACTC1-203ENST00000560563 EIF2S2P20042 333 aaKnown RBP10.66□□□□□ -0.7
ACTC1-203ENST00000560563 PDIA6Q15084 440 aa10.66□□□□□ -0.7
ACTC1-203ENST00000560563 HDGFL1Q5TGJ6 251 aa10.66□□□□□ -0.7
ACTC1-203ENST00000560563 CCDC30Q5VVM6 783 aa10.66□□□□□ -0.7
ACTC1-203ENST00000560563 DNAJC10Q8IXB1 793 aa10.66□□□□□ -0.7
ACTC1-203ENST00000560563 SSH1Q8WYL5 1049 aa10.66□□□□□ -0.7
ACTC1-203ENST00000560563 EP400Q96L91 3159 aa10.66□□□□□ -0.7
ACTC1-203ENST00000560563 TCERG1O14776 1098 aaKnown RBP10.65□□□□□ -0.7
ACTC1-203ENST00000560563 BCAR3O75815 825 aa10.65□□□□□ -0.7
ACTC1-203ENST00000560563 ATP6V1AP38606 617 aa10.65□□□□□ -0.7
ACTC1-203ENST00000560563 BRPF1P55201 1214 aaPredicted RBP10.65□□□□□ -0.7
ACTC1-203ENST00000560563 NECTIN2Q92692 538 aa10.65□□□□□ -0.7
ACTC1-203ENST00000560563 GRXCR2A6NFK2 248 aa10.64□□□□□ -0.71
ACTC1-203ENST00000560563 SPDYE16A6NNV3 312 aaPredicted RBP10.64□□□□□ -0.71
ACTC1-203ENST00000560563 PLSCR1O15162 318 aa10.64□□□□□ -0.71
ACTC1-203ENST00000560563 STARD3NLO95772 234 aa10.64□□□□□ -0.71
ACTC1-203ENST00000560563 APBA3O96018 575 aa10.64□□□□□ -0.71
ACTC1-203ENST00000560563 CYP19A1P11511 503 aaPredicted RBP10.64□□□□□ -0.71
ACTC1-203ENST00000560563 ITPK1Q13572 414 aa10.64□□□□□ -0.71
ACTC1-203ENST00000560563 TSR1Q2NL82 804 aaKnown RBP10.64□□□□□ -0.71
ACTC1-203ENST00000560563 BCL2L13Q9BXK5 485 aa10.64□□□□□ -0.71
ACTC1-203ENST00000560563 STK31Q9BXU1 1019 aa10.64□□□□□ -0.71
ACTC1-203ENST00000560563 SMC4Q9NTJ3 1288 aa10.64□□□□□ -0.71
ACTC1-203ENST00000560563 C5P01031 1676 aa10.63□□□□□ -0.71
ACTC1-203ENST00000560563 ERBB4Q15303 1308 aa10.63□□□□□ -0.71
ACTC1-203ENST00000560563 DDX21Q9NR30 783 aaKnown RBP eCLIP10.63□□□□□ -0.71
ACTC1-203ENST00000560563 CHPF2Q9P2E5 772 aa10.63□□□□□ -0.71
ACTC1-203ENST00000560563 DBF4Q9UBU7 674 aaPredicted RBP10.63□□□□□ -0.71
ACTC1-203ENST00000560563 SEPT9Q9UHD8 586 aaPredicted RBP10.63□□□□□ -0.71
ACTC1-203ENST00000560563 CCNL1Q9UK58 526 aaPredicted RBP10.63□□□□□ -0.71
ACTC1-203ENST00000560563 SUPT16HQ9Y5B9 1047 aaKnown RBP10.63□□□□□ -0.71
ACTC1-203ENST00000560563 ZNF831Q5JPB2 1677 aa10.63□□□□□ -0.71
ACTC1-203ENST00000560563 CICQ96RK0 1608 aaPredicted RBP10.62□□□□□ -0.71
ACTC1-203ENST00000560563 RNF123Q5XPI4 1314 aa10.62□□□□□ -0.71
ACTC1-203ENST00000560563 LY75O60449 1722 aa10.62□□□□□ -0.71
ACTC1-203ENST00000560563 TJP1Q07157 1748 aa10.62□□□□□ -0.71
ACTC1-203ENST00000560563 A1BGP04217 495 aa10.62□□□□□ -0.71
ACTC1-203ENST00000560563 KCNQ4P56696 695 aa10.62□□□□□ -0.71
ACTC1-203ENST00000560563 TXNRD1Q16881 649 aa10.62□□□□□ -0.71
ACTC1-203ENST00000560563 SLC27A3Q5K4L6 730 aa10.62□□□□□ -0.71
ACTC1-203ENST00000560563 LINC00116Q8NCU8 138 aa10.62□□□□□ -0.71
ACTC1-203ENST00000560563 ANKK1Q8NFD2 765 aa10.62□□□□□ -0.71
ACTC1-203ENST00000560563 LAMB4A4D0S4 1761 aa10.62□□□□□ -0.71
ACTC1-203ENST00000560563 TNS1Q9HBL0 1735 aaKnown RBP10.61□□□□□ -0.71
ACTC1-203ENST00000560563 NBPF26B4DH59 902 aa10.61□□□□□ -0.71
ACTC1-203ENST00000560563 ANXA1P04083 346 aa10.61□□□□□ -0.71
ACTC1-203ENST00000560563 BCAMP50895 628 aa10.61□□□□□ -0.71
ACTC1-203ENST00000560563 RRP1P56182 461 aaKnown RBP10.61□□□□□ -0.71
ACTC1-203ENST00000560563 EN1Q05925 392 aaPredicted RBP10.61□□□□□ -0.71
ACTC1-203ENST00000560563 SF3B2Q13435 895 aaKnown RBP10.61□□□□□ -0.71
ACTC1-203ENST00000560563 PROSER3Q2NL68 480 aa10.61□□□□□ -0.71
ACTC1-203ENST00000560563 NBPF14Q5TI25 921 aa10.61□□□□□ -0.71
ACTC1-203ENST00000560563 NBPF10Q6P3W6 841 aaKnown RBP10.61□□□□□ -0.71
ACTC1-203ENST00000560563 INTS5Q6P9B9 1019 aaKnown RBP10.61□□□□□ -0.71
ACTC1-203ENST00000560563 G2E3Q7L622 706 aa10.61□□□□□ -0.71
ACTC1-203ENST00000560563 LRP10Q7Z4F1 713 aa10.61□□□□□ -0.71
ACTC1-203ENST00000560563 NBPF15Q8N660 670 aa10.61□□□□□ -0.71
ACTC1-203ENST00000560563 LRRC4BQ9NT99 713 aa10.61□□□□□ -0.71
ACTC1-203ENST00000560563 HYPKQ9NX55 129 aa10.61□□□□□ -0.71
ACTC1-203ENST00000560563 NOB1Q9ULX3 412 aaKnown RBP10.61□□□□□ -0.71
ACTC1-203ENST00000560563 KIF16BQ96L93 1317 aa10.6□□□□□ -0.71
ACTC1-203ENST00000560563 TRIM6-TRIM34B2RNG4 842 aa10.6□□□□□ -0.71
ACTC1-203ENST00000560563 MYL6BP14649 208 aa10.6□□□□□ -0.71
ACTC1-203ENST00000560563 HMGB2P26583 209 aaKnown RBP10.6□□□□□ -0.71
ACTC1-203ENST00000560563 CRKLP46109 303 aaKnown RBP10.6□□□□□ -0.71
ACTC1-203ENST00000560563 PIP4K2AP48426 406 aaPredicted RBP10.6□□□□□ -0.71
ACTC1-203ENST00000560563 RC3H1Q5TC82 1133 aaKnown RBP10.6□□□□□ -0.71
ACTC1-203ENST00000560563 CCDC125Q86Z20 511 aa10.6□□□□□ -0.71
ACTC1-203ENST00000560563 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.6□□□□□ -0.71
ACTC1-203ENST00000560563 TSHZ2Q9NRE2 1034 aa10.6□□□□□ -0.71
ACTC1-203ENST00000560563 CCDC87Q9NVE4 849 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms