RNA–Protein interactions for RNA: ENST00000560498.5

HMG20A-210, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-210ENST00000560498 XAGE3Q8WTP9 111 aa21.72■■□□□ 1.07
HMG20A-210ENST00000560498 VEGFAP15692 232 aaPredicted RBP21.71■■□□□ 1.07
HMG20A-210ENST00000560498 ALDH1B1P30837 517 aa21.71■■□□□ 1.07
HMG20A-210ENST00000560498 DPY19L2Q6NUT2 758 aa21.71■■□□□ 1.07
HMG20A-210ENST00000560498 C3orf67Q6ZVT6 689 aa21.71■■□□□ 1.07
HMG20A-210ENST00000560498 TIAM2Q8IVF5 1701 aa21.7■■□□□ 1.06
HMG20A-210ENST00000560498 ARFGEF2Q9Y6D5 1785 aa21.7■■□□□ 1.06
HMG20A-210ENST00000560498 CFAP44Q96MT7 982 aa21.7■■□□□ 1.06
HMG20A-210ENST00000560498 DDX21Q9NR30 783 aaKnown RBP eCLIP21.7■■□□□ 1.06
HMG20A-210ENST00000560498 IBTKQ9P2D0 1353 aaPredicted RBP21.7■■□□□ 1.06
HMG20A-210ENST00000560498 PARP10Q53GL7 1025 aa21.69■■□□□ 1.06
HMG20A-210ENST00000560498 PPP1R42Q7Z4L9 355 aa21.69■■□□□ 1.06
HMG20A-210ENST00000560498 MBIPQ9NS73 344 aa21.69■■□□□ 1.06
HMG20A-210ENST00000560498 CHPF2Q9P2E5 772 aa21.69■■□□□ 1.06
HMG20A-210ENST00000560498 HOXA10P31260 410 aaPredicted RBP21.68■■□□□ 1.06
HMG20A-210ENST00000560498 FKBP4Q02790 459 aaKnown RBP eCLIP21.68■■□□□ 1.06
HMG20A-210ENST00000560498 SLC51AQ86UW1 340 aa21.68■■□□□ 1.06
HMG20A-210ENST00000560498 ZNF277Q9NRM2 450 aaPredicted RBP21.68■■□□□ 1.06
HMG20A-210ENST00000560498 DDNO94850 711 aaPredicted RBP21.67■■□□□ 1.06
HMG20A-210ENST00000560498 ZNF853P0CG23 659 aa21.67■■□□□ 1.06
HMG20A-210ENST00000560498 HDGFL1Q5TGJ6 251 aa21.67■■□□□ 1.06
HMG20A-210ENST00000560498 RTKN2Q8IZC4 609 aa21.67■■□□□ 1.06
HMG20A-210ENST00000560498 RPGRQ92834 1020 aaKnown RBP21.67■■□□□ 1.06
HMG20A-210ENST00000560498 UTP14AQ9BVJ6 771 aaKnown RBP21.67■■□□□ 1.06
HMG20A-210ENST00000560498 RIC1Q4ADV7 1423 aa21.66■■□□□ 1.06
HMG20A-210ENST00000560498 ZEB1P37275 1124 aaPredicted RBP21.66■■□□□ 1.06
HMG20A-210ENST00000560498 SLC10A5Q5PT55 438 aa21.66■■□□□ 1.06
HMG20A-210ENST00000560498 DUSP27Q5VZP5 1158 aa21.66■■□□□ 1.06
HMG20A-210ENST00000560498 SYNE4Q8N205 404 aa21.66■■□□□ 1.06
HMG20A-210ENST00000560498 DICER1Q9UPY3 1922 aaKnown RBP21.65■■□□□ 1.06
HMG20A-210ENST00000560498 TCIRG1Q13488 830 aa21.65■■□□□ 1.06
HMG20A-210ENST00000560498 NLRP10Q86W26 655 aa21.65■■□□□ 1.06
HMG20A-210ENST00000560498 ZNF428Q96B54 188 aa21.65■■□□□ 1.06
HMG20A-210ENST00000560498 TCERG1O14776 1098 aaKnown RBP21.64■■□□□ 1.05
HMG20A-210ENST00000560498 HOXB7P09629 217 aa21.64■■□□□ 1.05
HMG20A-210ENST00000560498 RBM17Q96I25 401 aaKnown RBP21.64■■□□□ 1.05
HMG20A-210ENST00000560498 NLRP3Q96P20 1036 aa21.64■■□□□ 1.05
HMG20A-210ENST00000560498 CRAMP1Q96RY5 1269 aa21.64■■□□□ 1.05
HMG20A-210ENST00000560498 SNED1Q8TER0 1413 aa21.63■■□□□ 1.05
HMG20A-210ENST00000560498 HSP90AB3PQ58FF7 597 aa21.63■■□□□ 1.05
HMG20A-210ENST00000560498 ELL2O00472 640 aaPredicted RBP21.62■■□□□ 1.05
HMG20A-210ENST00000560498 FOXN1O15353 648 aa21.62■■□□□ 1.05
HMG20A-210ENST00000560498 IARSP41252 1262 aaKnown RBP21.62■■□□□ 1.05
HMG20A-210ENST00000560498 IFT57Q9NWB7 429 aa21.62■■□□□ 1.05
HMG20A-210ENST00000560498 DBF4Q9UBU7 674 aaPredicted RBP21.62■■□□□ 1.05
HMG20A-210ENST00000560498 MKRN1Q9UHC7 482 aaKnown RBP21.62■■□□□ 1.05
HMG20A-210ENST00000560498 ZNF541Q9H0D2 1346 aa21.61■■□□□ 1.05
HMG20A-210ENST00000560498 HCLS1P14317 486 aaPredicted RBP21.61■■□□□ 1.05
HMG20A-210ENST00000560498 GNAI1P63096 354 aa21.61■■□□□ 1.05
HMG20A-210ENST00000560498 ANKRD13DQ6ZTN6 518 aa21.61■■□□□ 1.05
HMG20A-210ENST00000560498 PLBD2Q8NHP8 589 aa21.61■■□□□ 1.05
HMG20A-210ENST00000560498 PSMD1Q99460 953 aa21.61■■□□□ 1.05
HMG20A-210ENST00000560498 PPEF1O14829 653 aaPredicted RBP21.6■■□□□ 1.05
HMG20A-210ENST00000560498 CC2D2BQ6DHV5 1058 aa21.6■■□□□ 1.05
HMG20A-210ENST00000560498 TRMT112Q9UI30 125 aaKnown RBP21.6■■□□□ 1.05
HMG20A-210ENST00000560498 POTEIP0CG38 1075 aa21.59■■□□□ 1.05
HMG20A-210ENST00000560498 POTEJP0CG39 1038 aa21.59■■□□□ 1.05
HMG20A-210ENST00000560498 C8orf58Q8NAV2 365 aa21.59■■□□□ 1.05
HMG20A-210ENST00000560498 HYPKQ9NX55 129 aa21.59■■□□□ 1.05
HMG20A-210ENST00000560498 RNF123Q5XPI4 1314 aa21.58■■□□□ 1.05
HMG20A-210ENST00000560498 ZNF316A6NFI3 1004 aaPredicted RBP21.58■■□□□ 1.05
HMG20A-210ENST00000560498 ATP5J2-PTCD1G3V325 749 aa21.58■■□□□ 1.05
HMG20A-210ENST00000560498 FZD9O00144 591 aa21.58■■□□□ 1.05
HMG20A-210ENST00000560498 CALD1Q05682 793 aaKnown RBP21.58■■□□□ 1.05
HMG20A-210ENST00000560498 ISCA1Q9BUE6 129 aa21.58■■□□□ 1.05
HMG20A-210ENST00000560498 SH3TC1Q8TE82 1336 aa21.57■■□□□ 1.04
HMG20A-210ENST00000560498 L3MBTL3Q96JM7 780 aaPredicted RBP21.57■■□□□ 1.04
HMG20A-210ENST00000560498 PHAXQ9H814 394 aaKnown RBP21.57■■□□□ 1.04
HMG20A-210ENST00000560498 ABCC4O15439 1325 aa21.56■■□□□ 1.04
HMG20A-210ENST00000560498 FAM161AQ3B820 660 aa21.56■■□□□ 1.04
HMG20A-210ENST00000560498 PRDM10Q9NQV6 1147 aa21.56■■□□□ 1.04
HMG20A-210ENST00000560498 CREBZFQ9NS37 354 aa21.55■■□□□ 1.04
HMG20A-210ENST00000560498 ATP6V0A2Q9Y487 856 aa21.55■■□□□ 1.04
HMG20A-210ENST00000560498 COL4A5P29400 1685 aa21.55■■□□□ 1.04
HMG20A-210ENST00000560498 ANKRD36CQ5JPF3 1778 aa21.55■■□□□ 1.04
HMG20A-210ENST00000560498 GRIPAP1Q4V328 841 aa21.54■■□□□ 1.04
HMG20A-210ENST00000560498 TSPYL6Q8N831 410 aa21.54■■□□□ 1.04
HMG20A-210ENST00000560498 JDP2Q8WYK2 163 aa21.54■■□□□ 1.04
HMG20A-210ENST00000560498 FAM89AQ96GI7 184 aa21.54■■□□□ 1.04
HMG20A-210ENST00000560498 TAF1DQ9H5J8 278 aaPredicted RBP21.54■■□□□ 1.04
HMG20A-210ENST00000560498 IQCA1LA6NCM1 817 aa21.53■■□□□ 1.04
HMG20A-210ENST00000560498 CHADLQ6NUI6 762 aa21.53■■□□□ 1.04
HMG20A-210ENST00000560498 BBOX1O75936 387 aa21.52■■□□□ 1.04
HMG20A-210ENST00000560498 RTL5Q5HYW3 569 aaPredicted RBP21.52■■□□□ 1.04
HMG20A-210ENST00000560498 DDX46Q7L014 1031 aaKnown RBP21.52■■□□□ 1.04
HMG20A-210ENST00000560498 RIC3Q7Z5B4 369 aa21.52■■□□□ 1.04
HMG20A-210ENST00000560498 LARGE2Q8N3Y3 721 aa21.52■■□□□ 1.04
HMG20A-210ENST00000560498 TSR2Q969E8 191 aaKnown RBP21.52■■□□□ 1.04
HMG20A-210ENST00000560498 MRS2Q9HD23 443 aa21.52■■□□□ 1.04
HMG20A-210ENST00000560498 WWC1Q8IX03 1113 aa21.51■■□□□ 1.03
HMG20A-210ENST00000560498 SP8Q8IXZ3 490 aa21.51■■□□□ 1.03
HMG20A-210ENST00000560498 HACL1Q9UJ83 578 aa21.51■■□□□ 1.03
HMG20A-210ENST00000560498 ANP32CO43423 234 aa21.5■■□□□ 1.03
HMG20A-210ENST00000560498 CTCFP49711 727 aaPredicted RBP21.5■■□□□ 1.03
HMG20A-210ENST00000560498 TRIM28Q13263 835 aaKnown RBP21.5■■□□□ 1.03
HMG20A-210ENST00000560498 GRAPQ13588 217 aa21.5■■□□□ 1.03
HMG20A-210ENST00000560498 CCDC27Q2M243 656 aa21.5■■□□□ 1.03
HMG20A-210ENST00000560498 GPC2Q8N158 579 aa21.5■■□□□ 1.03
HMG20A-210ENST00000560498 GRAPLQ8TC17 118 aaPredicted RBP21.5■■□□□ 1.03
HMG20A-210ENST00000560498 TMX4Q9H1E5 349 aaPredicted RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms