RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 RUFY2Q8WXA3 655 aa11.81□□□□□ -0.52
RTF1-206ENST00000560447 CYP27B1O15528 508 aa11.8□□□□□ -0.52
RTF1-206ENST00000560447 PROSER3Q2NL68 480 aa11.8□□□□□ -0.52
RTF1-206ENST00000560447 RIC3Q7Z5B4 369 aa11.8□□□□□ -0.52
RTF1-206ENST00000560447 NFATC2IPQ8NCF5 419 aa11.8□□□□□ -0.52
RTF1-206ENST00000560447 TNPO1Q92973 898 aaKnown RBP11.8□□□□□ -0.52
RTF1-206ENST00000560447 CARD10Q9BWT7 1032 aa11.8□□□□□ -0.52
RTF1-206ENST00000560447 LRP6O75581 1613 aa11.79□□□□□ -0.52
RTF1-206ENST00000560447 PLCH1Q4KWH8 1693 aa11.79□□□□□ -0.52
RTF1-206ENST00000560447 NEURL1BA8MQ27 555 aa11.79□□□□□ -0.52
RTF1-206ENST00000560447 TRAK2O60296 914 aa11.79□□□□□ -0.52
RTF1-206ENST00000560447 CD2BP2O95400 341 aaKnown RBP11.79□□□□□ -0.52
RTF1-206ENST00000560447 PSEN1P49768 467 aa11.79□□□□□ -0.52
RTF1-206ENST00000560447 CABP4P57796 275 aa11.79□□□□□ -0.52
RTF1-206ENST00000560447 OS9Q13438 667 aaPredicted RBP11.79□□□□□ -0.52
RTF1-206ENST00000560447 LRP10Q7Z4F1 713 aa11.79□□□□□ -0.52
RTF1-206ENST00000560447 SPRYD3Q8NCJ5 442 aa11.79□□□□□ -0.52
RTF1-206ENST00000560447 RILPL2Q969X0 211 aa11.79□□□□□ -0.52
RTF1-206ENST00000560447 INTS4Q96HW7 963 aaKnown RBP11.79□□□□□ -0.52
RTF1-206ENST00000560447 ECHDC1Q9NTX5 307 aa11.79□□□□□ -0.52
RTF1-206ENST00000560447 RAD50Q92878 1312 aa11.79□□□□□ -0.52
RTF1-206ENST00000560447 RFX7Q2KHR2 1363 aa11.79□□□□□ -0.52
RTF1-206ENST00000560447 TNS2Q63HR2 1409 aa11.78□□□□□ -0.52
RTF1-206ENST00000560447 COL14A1Q05707 1796 aaKnown RBP11.78□□□□□ -0.52
RTF1-206ENST00000560447 KCPQ6ZWJ8 1503 aa11.78□□□□□ -0.52
RTF1-206ENST00000560447 SGSM2O43147 1006 aa11.78□□□□□ -0.52
RTF1-206ENST00000560447 ANXA1P04083 346 aa11.78□□□□□ -0.52
RTF1-206ENST00000560447 CYP2E1P05181 493 aaPredicted RBP11.78□□□□□ -0.52
RTF1-206ENST00000560447 PLCG2P16885 1265 aa11.78□□□□□ -0.52
RTF1-206ENST00000560447 HSPA4P34932 840 aa11.78□□□□□ -0.52
RTF1-206ENST00000560447 G3BP1Q13283 466 aaKnown RBP eCLIP11.78□□□□□ -0.52
RTF1-206ENST00000560447 CUL4AQ13619 759 aa11.78□□□□□ -0.52
RTF1-206ENST00000560447 GCKRQ14397 625 aa11.78□□□□□ -0.52
RTF1-206ENST00000560447 ZCRB1Q8TBF4 217 aaKnown RBP11.78□□□□□ -0.52
RTF1-206ENST00000560447 ZNF496Q96IT1 587 aaPredicted RBP11.78□□□□□ -0.52
RTF1-206ENST00000560447 IL1RAPL2Q9NP60 686 aa11.78□□□□□ -0.52
RTF1-206ENST00000560447 PRDM11Q9NQV5 511 aa11.78□□□□□ -0.52
RTF1-206ENST00000560447 SLAIN2Q9P270 581 aa11.78□□□□□ -0.52
RTF1-206ENST00000560447 COL22A1Q8NFW1 1626 aaPredicted RBP11.78□□□□□ -0.52
RTF1-206ENST00000560447 IGKV5-2P06315 115 aa11.77□□□□□ -0.53
RTF1-206ENST00000560447 IFIT2P09913 472 aaKnown RBP11.77□□□□□ -0.53
RTF1-206ENST00000560447 RABL6Q3YEC7 729 aaPredicted RBP11.77□□□□□ -0.53
RTF1-206ENST00000560447 ANKRD13DQ6ZTN6 518 aa11.77□□□□□ -0.53
RTF1-206ENST00000560447 NUTM1Q86Y26 1132 aa11.77□□□□□ -0.53
RTF1-206ENST00000560447 PLBD2Q8NHP8 589 aa11.77□□□□□ -0.53
RTF1-206ENST00000560447 XAGE3Q8WTP9 111 aa11.77□□□□□ -0.53
RTF1-206ENST00000560447 EVI5LQ96CN4 794 aa11.77□□□□□ -0.53
RTF1-206ENST00000560447 SUCLG2Q96I99 432 aa11.77□□□□□ -0.53
RTF1-206ENST00000560447 OCEL1Q9H607 264 aa11.77□□□□□ -0.53
RTF1-206ENST00000560447 ANO2Q9NQ90 1003 aa11.77□□□□□ -0.53
RTF1-206ENST00000560447 COPRSQ9NQ92 184 aa11.77□□□□□ -0.53
RTF1-206ENST00000560447 SNRKQ9NRH2 765 aa11.77□□□□□ -0.53
RTF1-206ENST00000560447 PDAP1Q13442 181 aaKnown RBP11.76□□□□□ -0.53
RTF1-206ENST00000560447 CHRNA2Q15822 529 aa11.76□□□□□ -0.53
RTF1-206ENST00000560447 CWF19L2Q2TBE0 894 aaKnown RBP11.76□□□□□ -0.53
RTF1-206ENST00000560447 COPS6Q7L5N1 327 aa11.76□□□□□ -0.53
RTF1-206ENST00000560447 KAZALD1Q96I82 304 aa11.76□□□□□ -0.53
RTF1-206ENST00000560447 TJP1Q07157 1748 aa11.76□□□□□ -0.53
RTF1-206ENST00000560447 WNK3Q9BYP7 1800 aa11.76□□□□□ -0.53
RTF1-206ENST00000560447 SPEF2Q9C093 1822 aa11.75□□□□□ -0.53
RTF1-206ENST00000560447 FSD2A1L4K1 749 aa11.75□□□□□ -0.53
RTF1-206ENST00000560447 PRAMEF22A3QJZ6 481 aa11.75□□□□□ -0.53
RTF1-206ENST00000560447 IL2RBP14784 551 aa11.75□□□□□ -0.53
RTF1-206ENST00000560447 HSPA2P54652 639 aa11.75□□□□□ -0.53
RTF1-206ENST00000560447 SLC39A6Q13433 755 aa11.75□□□□□ -0.53
RTF1-206ENST00000560447 KIAA1211Q6ZU35 1233 aa11.75□□□□□ -0.53
RTF1-206ENST00000560447 CABLES1Q8TDN4 633 aa11.75□□□□□ -0.53
RTF1-206ENST00000560447 DDX17Q92841 729 aaKnown RBP11.75□□□□□ -0.53
RTF1-206ENST00000560447 KCNB2Q92953 911 aa11.75□□□□□ -0.53
RTF1-206ENST00000560447 TM6SF1Q9BZW5 370 aa11.75□□□□□ -0.53
RTF1-206ENST00000560447 BICC1Q9H694 974 aaKnown RBP11.75□□□□□ -0.53
RTF1-206ENST00000560447 TOGARAM1Q9Y4F4 1720 aa11.74□□□□□ -0.53
RTF1-206ENST00000560447 PDIA4P13667 645 aaKnown RBP11.74□□□□□ -0.53
RTF1-206ENST00000560447 NEK4P51957 841 aa11.74□□□□□ -0.53
RTF1-206ENST00000560447 TSHZ3Q63HK5 1081 aa11.74□□□□□ -0.53
RTF1-206ENST00000560447 TOM1L2Q6ZVM7 507 aa11.74□□□□□ -0.53
RTF1-206ENST00000560447 UNC5CLQ8IV45 518 aa11.74□□□□□ -0.53
RTF1-206ENST00000560447 MYD88Q99836 296 aa11.74□□□□□ -0.53
RTF1-206ENST00000560447 TEX13AQ9BXU3 409 aaPredicted RBP11.74□□□□□ -0.53
RTF1-206ENST00000560447 DIAPH3Q9NSV4 1193 aa11.74□□□□□ -0.53
RTF1-206ENST00000560447 AHDC1Q5TGY3 1603 aaPredicted RBP11.74□□□□□ -0.53
RTF1-206ENST00000560447 GOLGA6L3A6NEY3 463 aa11.73□□□□□ -0.53
RTF1-206ENST00000560447 SASH1O94885 1247 aa11.73□□□□□ -0.53
RTF1-206ENST00000560447 BAG4O95429 457 aaKnown RBP11.73□□□□□ -0.53
RTF1-206ENST00000560447 AIMP1Q12904 312 aaKnown RBP11.73□□□□□ -0.53
RTF1-206ENST00000560447 VSIG10Q8N0Z9 540 aa11.73□□□□□ -0.53
RTF1-206ENST00000560447 PDCD7Q8N8D1 485 aaKnown RBP11.73□□□□□ -0.53
RTF1-206ENST00000560447 LSG1Q9H089 658 aaKnown RBP11.73□□□□□ -0.53
RTF1-206ENST00000560447 BCL11AQ9H165 835 aa11.73□□□□□ -0.53
RTF1-206ENST00000560447 GPR108Q9NPR9 543 aa11.73□□□□□ -0.53
RTF1-206ENST00000560447 USP16Q9Y5T5 823 aa11.73□□□□□ -0.53
RTF1-206ENST00000560447 ITGB4P16144 1822 aa11.72□□□□□ -0.53
RTF1-206ENST00000560447 MYL6BP14649 208 aa11.72□□□□□ -0.53
RTF1-206ENST00000560447 MRE11P49959 708 aa11.72□□□□□ -0.53
RTF1-206ENST00000560447 CASP7P55210 303 aa11.72□□□□□ -0.53
RTF1-206ENST00000560447 KLHL40Q2TBA0 621 aa11.72□□□□□ -0.53
RTF1-206ENST00000560447 ILDR1Q86SU0 546 aaPredicted RBP11.72□□□□□ -0.53
RTF1-206ENST00000560447 AACSQ86V21 672 aa11.72□□□□□ -0.53
RTF1-206ENST00000560447 TMX3Q96JJ7 454 aa11.72□□□□□ -0.53
RTF1-206ENST00000560447 ATG3Q9NT62 314 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms