RNA–Protein interactions for RNA: ENST00000560420.1

PSME1-207, Transcript of proteasome activator subunit 1, humanhuman

TSL 2

Gene PSME1, Length 922 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-207ENST00000560420 SPINK5Q9NQ38 1064 aaPredicted RBP19.01■□□□□ 0.63
PSME1-207ENST00000560420 LTBP3Q9NS15 1303 aa19■□□□□ 0.63
PSME1-207ENST00000560420 NPHP1O15259 732 aa19■□□□□ 0.63
PSME1-207ENST00000560420 LAMB2P55268 1798 aa18.99■□□□□ 0.63
PSME1-207ENST00000560420 HOXA10P31260 410 aaPredicted RBP18.99■□□□□ 0.63
PSME1-207ENST00000560420 TRIM28Q13263 835 aaKnown RBP18.99■□□□□ 0.63
PSME1-207ENST00000560420 ANKRD13DQ6ZTN6 518 aa18.99■□□□□ 0.63
PSME1-207ENST00000560420 C3orf67Q6ZVT6 689 aa18.99■□□□□ 0.63
PSME1-207ENST00000560420 PPP1R42Q7Z4L9 355 aa18.99■□□□□ 0.63
PSME1-207ENST00000560420 PHAXQ9H814 394 aaKnown RBP18.99■□□□□ 0.63
PSME1-207ENST00000560420 TIAM2Q8IVF5 1701 aa18.98■□□□□ 0.63
PSME1-207ENST00000560420 DDX60Q8IY21 1712 aaKnown RBP18.98■□□□□ 0.63
PSME1-207ENST00000560420 C21orf2O43822 256 aa18.98■□□□□ 0.63
PSME1-207ENST00000560420 UTP14AQ9BVJ6 771 aaKnown RBP18.98■□□□□ 0.63
PSME1-207ENST00000560420 ZC3H4Q9UPT8 1303 aaKnown RBP18.98■□□□□ 0.63
PSME1-207ENST00000560420 CCDC30Q5VVM6 783 aa18.97■□□□□ 0.63
PSME1-207ENST00000560420 DICER1Q9UPY3 1922 aaKnown RBP18.96■□□□□ 0.63
PSME1-207ENST00000560420 CCER2I3L3R5 266 aa18.96■□□□□ 0.63
PSME1-207ENST00000560420 LMNB1P20700 586 aa18.96■□□□□ 0.63
PSME1-207ENST00000560420 GTF2E1P29083 439 aaPredicted RBP18.96■□□□□ 0.63
PSME1-207ENST00000560420 TWISTNBQ3B726 338 aaPredicted RBP18.96■□□□□ 0.63
PSME1-207ENST00000560420 RNF181Q9P0P0 153 aa18.96■□□□□ 0.63
PSME1-207ENST00000560420 CCDC88AQ3V6T2 1871 aa18.95■□□□□ 0.62
PSME1-207ENST00000560420 SYNE4Q8N205 404 aa18.95■□□□□ 0.62
PSME1-207ENST00000560420 CHMP4AQ9BY43 222 aa18.95■□□□□ 0.62
PSME1-207ENST00000560420 KIF3CO14782 793 aa18.94■□□□□ 0.62
PSME1-207ENST00000560420 VAMP4O75379 141 aa18.94■□□□□ 0.62
PSME1-207ENST00000560420 ALDH1B1P30837 517 aa18.94■□□□□ 0.62
PSME1-207ENST00000560420 SOGA3Q5TF21 947 aa18.94■□□□□ 0.62
PSME1-207ENST00000560420 CRAMP1Q96RY5 1269 aa18.94■□□□□ 0.62
PSME1-207ENST00000560420 GPBP1L1Q9HC44 474 aaPredicted RBP18.94■□□□□ 0.62
PSME1-207ENST00000560420 SALL2Q9Y467 1007 aaPredicted RBP18.94■□□□□ 0.62
PSME1-207ENST00000560420 SH3TC1Q8TE82 1336 aa18.93■□□□□ 0.62
PSME1-207ENST00000560420 GOLGA2Q08379 1002 aa18.92■□□□□ 0.62
PSME1-207ENST00000560420 CCDC93Q567U6 631 aa18.92■□□□□ 0.62
PSME1-207ENST00000560420 OLFM4Q6UX06 510 aa18.92■□□□□ 0.62
PSME1-207ENST00000560420 SLC51AQ86UW1 340 aa18.92■□□□□ 0.62
PSME1-207ENST00000560420 TAOK3Q9H2K8 898 aa18.92■□□□□ 0.62
PSME1-207ENST00000560420 CACNA1FO60840 1977 aa18.92■□□□□ 0.62
PSME1-207ENST00000560420 ATP5J2-PTCD1G3V325 749 aa18.91■□□□□ 0.62
PSME1-207ENST00000560420 C1QTNF8P60827 252 aa18.91■□□□□ 0.62
PSME1-207ENST00000560420 EXOSC9Q06265 439 aaKnown RBP18.91■□□□□ 0.62
PSME1-207ENST00000560420 G2E3Q7L622 706 aa18.91■□□□□ 0.62
PSME1-207ENST00000560420 ZNF526Q8TF50 670 aaPredicted RBP18.91■□□□□ 0.62
PSME1-207ENST00000560420 NLRP3Q96P20 1036 aa18.91■□□□□ 0.62
PSME1-207ENST00000560420 METTL22Q9BUU2 404 aaPredicted RBP18.91■□□□□ 0.62
PSME1-207ENST00000560420 ZNF219Q9P2Y4 722 aaPredicted RBP18.91■□□□□ 0.62
PSME1-207ENST00000560420 TRMT112Q9UI30 125 aaKnown RBP18.91■□□□□ 0.62
PSME1-207ENST00000560420 COL4A1P02462 1669 aa18.91■□□□□ 0.62
PSME1-207ENST00000560420 HCLS1P14317 486 aaPredicted RBP18.9■□□□□ 0.62
PSME1-207ENST00000560420 RIC3Q7Z5B4 369 aa18.9■□□□□ 0.62
PSME1-207ENST00000560420 LRRC37AA6NMS7 1700 aa18.89■□□□□ 0.61
PSME1-207ENST00000560420 FKBP4Q02790 459 aaKnown RBP eCLIP18.89■□□□□ 0.61
PSME1-207ENST00000560420 KSR2Q6VAB6 950 aa18.89■□□□□ 0.61
PSME1-207ENST00000560420 RPGRQ92834 1020 aaKnown RBP18.89■□□□□ 0.61
PSME1-207ENST00000560420 MYH16Q9H6N6 1097 aa18.89■□□□□ 0.61
PSME1-207ENST00000560420 ABCC4O15439 1325 aa18.89■□□□□ 0.61
PSME1-207ENST00000560420 TCERG1O14776 1098 aaKnown RBP18.88■□□□□ 0.61
PSME1-207ENST00000560420 IGKV5-2P06315 115 aa18.88■□□□□ 0.61
PSME1-207ENST00000560420 SF3B3Q15393 1217 aaKnown RBP18.88■□□□□ 0.61
PSME1-207ENST00000560420 FAM89AQ96GI7 184 aa18.88■□□□□ 0.61
PSME1-207ENST00000560420 RBM17Q96I25 401 aaKnown RBP18.88■□□□□ 0.61
PSME1-207ENST00000560420 NMRK2Q9NPI5 230 aa18.88■□□□□ 0.61
PSME1-207ENST00000560420 COL4A5P29400 1685 aa18.88■□□□□ 0.61
PSME1-207ENST00000560420 PI4KAP2A4QPH2 592 aa18.87■□□□□ 0.61
PSME1-207ENST00000560420 DDX58O95786 925 aaKnown RBP18.87■□□□□ 0.61
PSME1-207ENST00000560420 CC2D2BQ6DHV5 1058 aa18.87■□□□□ 0.61
PSME1-207ENST00000560420 RTKN2Q8IZC4 609 aa18.87■□□□□ 0.61
PSME1-207ENST00000560420 PI4KAP1Q8N8J0 262 aa18.87■□□□□ 0.61
PSME1-207ENST00000560420 ZBTB38Q8NAP3 1195 aaPredicted RBP18.87■□□□□ 0.61
PSME1-207ENST00000560420 CCDC191Q8NCU4 936 aa18.87■□□□□ 0.61
PSME1-207ENST00000560420 WDR90Q96KV7 1748 aa18.87■□□□□ 0.61
PSME1-207ENST00000560420 PSMD1Q99460 953 aa18.87■□□□□ 0.61
PSME1-207ENST00000560420 MYD88Q99836 296 aa18.87■□□□□ 0.61
PSME1-207ENST00000560420 STK31Q9BXU1 1019 aa18.87■□□□□ 0.61
PSME1-207ENST00000560420 MAP3K2Q9Y2U5 619 aa18.87■□□□□ 0.61
PSME1-207ENST00000560420 SLC4A2P04920 1241 aa18.86■□□□□ 0.61
PSME1-207ENST00000560420 FLIIQ13045 1269 aa18.86■□□□□ 0.61
PSME1-207ENST00000560420 ZNF428Q96B54 188 aa18.86■□□□□ 0.61
PSME1-207ENST00000560420 DUOX1Q9NRD9 1551 aa18.85■□□□□ 0.61
PSME1-207ENST00000560420 GLTPD2A6NH11 291 aa18.85■□□□□ 0.61
PSME1-207ENST00000560420 PPEF1O14829 653 aaPredicted RBP18.85■□□□□ 0.61
PSME1-207ENST00000560420 PCCAP05165 728 aaPredicted RBP18.85■□□□□ 0.61
PSME1-207ENST00000560420 ATP6V0A2Q9Y487 856 aa18.85■□□□□ 0.61
PSME1-207ENST00000560420 TAF1P21675 1872 aa18.85■□□□□ 0.61
PSME1-207ENST00000560420 KDM2BQ8NHM5 1336 aa18.84■□□□□ 0.61
PSME1-207ENST00000560420 LTBP1Q14766 1721 aa18.84■□□□□ 0.61
PSME1-207ENST00000560420 GRIPAP1Q4V328 841 aa18.84■□□□□ 0.61
PSME1-207ENST00000560420 CWC25Q9NXE8 425 aaPredicted RBP18.84■□□□□ 0.61
PSME1-207ENST00000560420 CDHR2Q9BYE9 1310 aa18.83■□□□□ 0.61
PSME1-207ENST00000560420 IRS4O14654 1257 aaPredicted RBP18.83■□□□□ 0.6
PSME1-207ENST00000560420 GRAPQ13588 217 aa18.83■□□□□ 0.6
PSME1-207ENST00000560420 TRMT2AQ8IZ69 625 aaKnown RBP18.83■□□□□ 0.6
PSME1-207ENST00000560420 GRAPLQ8TC17 118 aaPredicted RBP18.83■□□□□ 0.6
PSME1-207ENST00000560420 ZNF277Q9NRM2 450 aaPredicted RBP18.83■□□□□ 0.6
PSME1-207ENST00000560420 CEP350Q5VT06 3117 aa18.82■□□□□ 0.6
PSME1-207ENST00000560420 NEURL1BA8MQ27 555 aa18.82■□□□□ 0.6
PSME1-207ENST00000560420 POTECB2RU33 542 aa18.82■□□□□ 0.6
PSME1-207ENST00000560420 BBOX1O75936 387 aa18.82■□□□□ 0.6
PSME1-207ENST00000560420 SLFN5Q08AF3 891 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms