RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 GTF2E1P29083 439 aaPredicted RBP19.69■□□□□ 0.74
SNRPA1-210ENST00000560383 ALDH1B1P30837 517 aa19.69■□□□□ 0.74
SNRPA1-210ENST00000560383 HDGFL1Q5TGJ6 251 aa19.69■□□□□ 0.74
SNRPA1-210ENST00000560383 ZBTB3Q9H5J0 574 aa19.69■□□□□ 0.74
SNRPA1-210ENST00000560383 UBN2Q6ZU65 1347 aa19.69■□□□□ 0.74
SNRPA1-210ENST00000560383 ZNF34Q8IZ26 560 aa19.68■□□□□ 0.74
SNRPA1-210ENST00000560383 DNAJC5GQ8N7S2 189 aa19.68■□□□□ 0.74
SNRPA1-210ENST00000560383 NECTIN2Q92692 538 aa19.68■□□□□ 0.74
SNRPA1-210ENST00000560383 CHPF2Q9P2E5 772 aa19.68■□□□□ 0.74
SNRPA1-210ENST00000560383 DBF4Q9UBU7 674 aaPredicted RBP19.68■□□□□ 0.74
SNRPA1-210ENST00000560383 SNED1Q8TER0 1413 aa19.68■□□□□ 0.74
SNRPA1-210ENST00000560383 FAM177BA6PVY3 158 aa19.67■□□□□ 0.74
SNRPA1-210ENST00000560383 FKBP4Q02790 459 aaKnown RBP eCLIP19.67■□□□□ 0.74
SNRPA1-210ENST00000560383 COPS6Q7L5N1 327 aa19.67■□□□□ 0.74
SNRPA1-210ENST00000560383 RTKN2Q8IZC4 609 aa19.67■□□□□ 0.74
SNRPA1-210ENST00000560383 XAGE3Q8WTP9 111 aa19.67■□□□□ 0.74
SNRPA1-210ENST00000560383 POTECB2RU33 542 aa19.66■□□□□ 0.74
SNRPA1-210ENST00000560383 PARP10Q53GL7 1025 aa19.66■□□□□ 0.74
SNRPA1-210ENST00000560383 FAM9BQ8IZU0 186 aa19.66■□□□□ 0.74
SNRPA1-210ENST00000560383 C8orf58Q8NAV2 365 aa19.66■□□□□ 0.74
SNRPA1-210ENST00000560383 SCN4AP35499 1836 aa19.66■□□□□ 0.74
SNRPA1-210ENST00000560383 PCNTO95613 3336 aa19.65■□□□□ 0.74
SNRPA1-210ENST00000560383 NTSR2O95665 410 aa19.65■□□□□ 0.74
SNRPA1-210ENST00000560383 NUTM1Q86Y26 1132 aa19.65■□□□□ 0.74
SNRPA1-210ENST00000560383 WDR63Q8IWG1 891 aa19.65■□□□□ 0.74
SNRPA1-210ENST00000560383 RNF123Q5XPI4 1314 aa19.65■□□□□ 0.74
SNRPA1-210ENST00000560383 GPTP24298 496 aa19.64■□□□□ 0.73
SNRPA1-210ENST00000560383 HOXA10P31260 410 aaPredicted RBP19.64■□□□□ 0.73
SNRPA1-210ENST00000560383 PPP1R42Q7Z4L9 355 aa19.64■□□□□ 0.73
SNRPA1-210ENST00000560383 HYPKQ9NX55 129 aa19.64■□□□□ 0.73
SNRPA1-210ENST00000560383 SUSD4Q5VX71 490 aa19.63■□□□□ 0.73
SNRPA1-210ENST00000560383 CC2D2BQ6DHV5 1058 aa19.63■□□□□ 0.73
SNRPA1-210ENST00000560383 TSR2Q969E8 191 aaKnown RBP19.63■□□□□ 0.73
SNRPA1-210ENST00000560383 CHMP4AQ9BY43 222 aa19.63■□□□□ 0.73
SNRPA1-210ENST00000560383 ELL2O00472 640 aaPredicted RBP19.62■□□□□ 0.73
SNRPA1-210ENST00000560383 AIMP1Q12904 312 aaKnown RBP19.62■□□□□ 0.73
SNRPA1-210ENST00000560383 GRIPAP1Q4V328 841 aa19.62■□□□□ 0.73
SNRPA1-210ENST00000560383 HSP90AB3PQ58FF7 597 aa19.62■□□□□ 0.73
SNRPA1-210ENST00000560383 RPGRQ92834 1020 aaKnown RBP19.62■□□□□ 0.73
SNRPA1-210ENST00000560383 L3MBTL3Q96JM7 780 aaPredicted RBP19.62■□□□□ 0.73
SNRPA1-210ENST00000560383 PSMD1Q99460 953 aa19.62■□□□□ 0.73
SNRPA1-210ENST00000560383 TCIRG1Q13488 830 aa19.61■□□□□ 0.73
SNRPA1-210ENST00000560383 TSPYL6Q8N831 410 aa19.61■□□□□ 0.73
SNRPA1-210ENST00000560383 PLBD2Q8NHP8 589 aa19.61■□□□□ 0.73
SNRPA1-210ENST00000560383 KLRG1Q96E93 195 aa19.61■□□□□ 0.73
SNRPA1-210ENST00000560383 LAMB2P55268 1798 aa19.61■□□□□ 0.73
SNRPA1-210ENST00000560383 IQCA1LA6NCM1 817 aa19.6■□□□□ 0.73
SNRPA1-210ENST00000560383 DDNO94850 711 aaPredicted RBP19.6■□□□□ 0.73
SNRPA1-210ENST00000560383 ANKRD13DQ6ZTN6 518 aa19.6■□□□□ 0.73
SNRPA1-210ENST00000560383 CRAMP1Q96RY5 1269 aa19.6■□□□□ 0.73
SNRPA1-210ENST00000560383 CCER2I3L3R5 266 aa19.59■□□□□ 0.73
SNRPA1-210ENST00000560383 IARSP41252 1262 aaKnown RBP19.59■□□□□ 0.73
SNRPA1-210ENST00000560383 CCDC30Q5VVM6 783 aa19.59■□□□□ 0.73
SNRPA1-210ENST00000560383 OLFM4Q6UX06 510 aa19.59■□□□□ 0.73
SNRPA1-210ENST00000560383 JMYQ8N9B5 988 aa19.59■□□□□ 0.73
SNRPA1-210ENST00000560383 ZNF277Q9NRM2 450 aaPredicted RBP19.59■□□□□ 0.73
SNRPA1-210ENST00000560383 FANCIQ9NVI1 1328 aa19.58■□□□□ 0.73
SNRPA1-210ENST00000560383 SLC10A5Q5PT55 438 aa19.58■□□□□ 0.72
SNRPA1-210ENST00000560383 NLRP10Q86W26 655 aa19.58■□□□□ 0.72
SNRPA1-210ENST00000560383 RBM17Q96I25 401 aaKnown RBP19.58■□□□□ 0.72
SNRPA1-210ENST00000560383 UTP14AQ9BVJ6 771 aaKnown RBP19.58■□□□□ 0.72
SNRPA1-210ENST00000560383 SALL2Q9Y467 1007 aaPredicted RBP19.58■□□□□ 0.72
SNRPA1-210ENST00000560383 FZD9O00144 591 aa19.57■□□□□ 0.72
SNRPA1-210ENST00000560383 HTRA3P83110 453 aa19.57■□□□□ 0.72
SNRPA1-210ENST00000560383 NLRP3Q96P20 1036 aa19.57■□□□□ 0.72
SNRPA1-210ENST00000560383 ISCA1Q9BUE6 129 aa19.57■□□□□ 0.72
SNRPA1-210ENST00000560383 ADAMTSL1Q8N6G6 1762 aa19.57■□□□□ 0.72
SNRPA1-210ENST00000560383 ZNF521Q96K83 1311 aa19.56■□□□□ 0.72
SNRPA1-210ENST00000560383 ZNF541Q9H0D2 1346 aa19.56■□□□□ 0.72
SNRPA1-210ENST00000560383 TRIM28Q13263 835 aaKnown RBP19.56■□□□□ 0.72
SNRPA1-210ENST00000560383 TWISTNBQ3B726 338 aaPredicted RBP19.56■□□□□ 0.72
SNRPA1-210ENST00000560383 SYNE4Q8N205 404 aa19.56■□□□□ 0.72
SNRPA1-210ENST00000560383 PHAXQ9H814 394 aaKnown RBP19.56■□□□□ 0.72
SNRPA1-210ENST00000560383 PPEF1O14829 653 aaPredicted RBP19.55■□□□□ 0.72
SNRPA1-210ENST00000560383 CHADLQ6NUI6 762 aa19.55■□□□□ 0.72
SNRPA1-210ENST00000560383 SPINK5Q9NQ38 1064 aaPredicted RBP19.55■□□□□ 0.72
SNRPA1-210ENST00000560383 COL4A5P29400 1685 aa19.55■□□□□ 0.72
SNRPA1-210ENST00000560383 C3orf67Q6ZVT6 689 aa19.54■□□□□ 0.72
SNRPA1-210ENST00000560383 LDHDQ86WU2 507 aa19.54■□□□□ 0.72
SNRPA1-210ENST00000560383 JDP2Q8WYK2 163 aa19.54■□□□□ 0.72
SNRPA1-210ENST00000560383 TAF1DQ9H5J8 278 aaPredicted RBP19.54■□□□□ 0.72
SNRPA1-210ENST00000560383 DDX60Q8IY21 1712 aaKnown RBP19.54■□□□□ 0.72
SNRPA1-210ENST00000560383 GOLGA2Q08379 1002 aa19.53■□□□□ 0.72
SNRPA1-210ENST00000560383 IFFO2Q5TF58 517 aa19.53■□□□□ 0.72
SNRPA1-210ENST00000560383 GPC2Q8N158 579 aa19.53■□□□□ 0.72
SNRPA1-210ENST00000560383 SH3TC1Q8TE82 1336 aa19.52■□□□□ 0.72
SNRPA1-210ENST00000560383 LRRC37AA6NMS7 1700 aa19.52■□□□□ 0.72
SNRPA1-210ENST00000560383 RIC3Q7Z5B4 369 aa19.52■□□□□ 0.72
SNRPA1-210ENST00000560383 VPS33BQ9H267 617 aa19.52■□□□□ 0.72
SNRPA1-210ENST00000560383 MYH16Q9H6N6 1097 aa19.52■□□□□ 0.72
SNRPA1-210ENST00000560383 TRMT112Q9UI30 125 aaKnown RBP19.52■□□□□ 0.72
SNRPA1-210ENST00000560383 HACL1Q9UJ83 578 aa19.52■□□□□ 0.72
SNRPA1-210ENST00000560383 ABCC4O15439 1325 aa19.51■□□□□ 0.71
SNRPA1-210ENST00000560383 VAMP4O75379 141 aa19.51■□□□□ 0.71
SNRPA1-210ENST00000560383 POTEIP0CG38 1075 aa19.51■□□□□ 0.71
SNRPA1-210ENST00000560383 POTEJP0CG39 1038 aa19.51■□□□□ 0.71
SNRPA1-210ENST00000560383 STK31Q9BXU1 1019 aa19.51■□□□□ 0.71
SNRPA1-210ENST00000560383 TMX4Q9H1E5 349 aaPredicted RBP19.51■□□□□ 0.71
SNRPA1-210ENST00000560383 ATP6V0A2Q9Y487 856 aa19.51■□□□□ 0.71
SNRPA1-210ENST00000560383 ATP5J2-PTCD1G3V325 749 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms