RNA–Protein interactions for RNA: ENST00000560311.1

IRF9-208, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-208ENST00000560311 MRC1P22897 1456 aa8.8□□□□□ -1
IRF9-208ENST00000560311 GDF9O60383 454 aa8.79□□□□□ -1
IRF9-208ENST00000560311 ZBTB7AO95365 584 aa8.79□□□□□ -1
IRF9-208ENST00000560311 OSBPP22059 807 aa8.79□□□□□ -1
IRF9-208ENST00000560311 KCNQ4P56696 695 aa8.79□□□□□ -1
IRF9-208ENST00000560311 SULT6B1Q6IMI4 303 aa8.79□□□□□ -1
IRF9-208ENST00000560311 ZNF530Q6P9A1 599 aaPredicted RBP8.79□□□□□ -1
IRF9-208ENST00000560311 PADI6Q6TGC4 694 aa8.79□□□□□ -1
IRF9-208ENST00000560311 AAASQ9NRG9 546 aa8.79□□□□□ -1
IRF9-208ENST00000560311 RBM27Q9P2N5 1060 aaKnown RBP8.79□□□□□ -1
IRF9-208ENST00000560311 ITGB4P16144 1822 aa8.79□□□□□ -1
IRF9-208ENST00000560311 C4BP0C0L5 1744 aa8.78□□□□□ -1
IRF9-208ENST00000560311 S1PR4O95977 384 aa8.78□□□□□ -1
IRF9-208ENST00000560311 PLEKHO1Q53GL0 409 aaPredicted RBP8.78□□□□□ -1
IRF9-208ENST00000560311 ANKLE1Q8NAG6 615 aa8.78□□□□□ -1
IRF9-208ENST00000560311 TTC13Q8NBP0 860 aa8.78□□□□□ -1
IRF9-208ENST00000560311 SPON1Q9HCB6 807 aa8.78□□□□□ -1
IRF9-208ENST00000560311 TMOD3Q9NYL9 352 aa8.78□□□□□ -1
IRF9-208ENST00000560311 PNPLA7Q6ZV29 1317 aa8.78□□□□□ -1
IRF9-208ENST00000560311 DIAPH1O60610 1272 aaKnown RBP8.77□□□□□ -1.01
IRF9-208ENST00000560311 HSP90AB1P08238 724 aaKnown RBP8.77□□□□□ -1.01
IRF9-208ENST00000560311 AMOTQ4VCS5 1084 aa8.77□□□□□ -1.01
IRF9-208ENST00000560311 PIGBQ92521 554 aa8.77□□□□□ -1.01
IRF9-208ENST00000560311 PPP1R1BQ9UD71 204 aaPredicted RBP8.77□□□□□ -1.01
IRF9-208ENST00000560311 ADAMTS7Q9UKP4 1686 aa8.77□□□□□ -1.01
IRF9-208ENST00000560311 HMOX1P09601 288 aa8.76□□□□□ -1.01
IRF9-208ENST00000560311 C1orf141Q5JVX7 400 aa8.76□□□□□ -1.01
IRF9-208ENST00000560311 SPRYD3Q8NCJ5 442 aa8.76□□□□□ -1.01
IRF9-208ENST00000560311 SMARCC1Q92922 1105 aaPredicted RBP8.76□□□□□ -1.01
IRF9-208ENST00000560311 DCAF5Q96JK2 942 aa8.76□□□□□ -1.01
IRF9-208ENST00000560311 MTFR1LQ9H019 292 aa8.76□□□□□ -1.01
IRF9-208ENST00000560311 TFCP2L1Q9NZI6 479 aa8.76□□□□□ -1.01
IRF9-208ENST00000560311 CICQ96RK0 1608 aaPredicted RBP8.76□□□□□ -1.01
IRF9-208ENST00000560311 PPP2R1AP30153 589 aa8.75□□□□□ -1.01
IRF9-208ENST00000560311 SLC4A3P48751 1232 aa8.75□□□□□ -1.01
IRF9-208ENST00000560311 PRR14Q9BWN1 585 aa8.75□□□□□ -1.01
IRF9-208ENST00000560311 NPDC1Q9NQX5 325 aaPredicted RBP8.75□□□□□ -1.01
IRF9-208ENST00000560311 TAF1LQ8IZX4 1826 aa8.75□□□□□ -1.01
IRF9-208ENST00000560311 ZNF831Q5JPB2 1677 aa8.75□□□□□ -1.01
IRF9-208ENST00000560311 COL5A3P25940 1745 aaPredicted RBP8.74□□□□□ -1.01
IRF9-208ENST00000560311 COL24A1Q17RW2 1714 aa8.74□□□□□ -1.01
IRF9-208ENST00000560311 LOC102724428A0A0B4J2F2 783 aa8.74□□□□□ -1.01
IRF9-208ENST00000560311 ERVV-2B6SEH9 535 aa8.74□□□□□ -1.01
IRF9-208ENST00000560311 U2SURPO15042 1029 aaKnown RBP8.74□□□□□ -1.01
IRF9-208ENST00000560311 SIK1P57059 783 aa8.74□□□□□ -1.01
IRF9-208ENST00000560311 AKAP4Q5JQC9 854 aa8.74□□□□□ -1.01
IRF9-208ENST00000560311 LINC00116Q8NCU8 138 aa8.74□□□□□ -1.01
IRF9-208ENST00000560311 AK7Q96M32 723 aa8.74□□□□□ -1.01
IRF9-208ENST00000560311 CFAP53Q96M91 514 aa8.74□□□□□ -1.01
IRF9-208ENST00000560311 DACH1Q9UI36 760 aa8.74□□□□□ -1.01
IRF9-208ENST00000560311 ASAP1Q9ULH1 1129 aa8.74□□□□□ -1.01
IRF9-208ENST00000560311 TJP1Q07157 1748 aa8.74□□□□□ -1.01
IRF9-208ENST00000560311 MAP3K5Q99683 1374 aa8.73□□□□□ -1.01
IRF9-208ENST00000560311 SCN11AQ9UI33 1791 aa8.73□□□□□ -1.01
IRF9-208ENST00000560311 CABP4P57796 275 aa8.73□□□□□ -1.01
IRF9-208ENST00000560311 ATG3Q9NT62 314 aa8.73□□□□□ -1.01
IRF9-208ENST00000560311 KCPQ6ZWJ8 1503 aa8.73□□□□□ -1.01
IRF9-208ENST00000560311 WFS1O76024 890 aa8.72□□□□□ -1.01
IRF9-208ENST00000560311 ITPK1Q13572 414 aa8.72□□□□□ -1.01
IRF9-208ENST00000560311 MTHFSDQ2M296 383 aaKnown RBP8.72□□□□□ -1.01
IRF9-208ENST00000560311 PLA2G2CQ5R387 149 aa8.72□□□□□ -1.01
IRF9-208ENST00000560311 UBR3Q6ZT12 1888 aa8.72□□□□□ -1.01
IRF9-208ENST00000560311 ATP6V1AP38606 617 aa8.71□□□□□ -1.02
IRF9-208ENST00000560311 AMIGO3Q86WK7 504 aa8.71□□□□□ -1.02
IRF9-208ENST00000560311 COL23A1Q86Y22 540 aaPredicted RBP8.71□□□□□ -1.02
IRF9-208ENST00000560311 SLC16A10Q8TF71 515 aa8.71□□□□□ -1.02
IRF9-208ENST00000560311 RSPH6AQ9H0K4 717 aa8.71□□□□□ -1.02
IRF9-208ENST00000560311 GNPATO15228 680 aa8.7□□□□□ -1.02
IRF9-208ENST00000560311 HMGB2P26583 209 aaKnown RBP8.7□□□□□ -1.02
IRF9-208ENST00000560311 SSFA2P28290 1259 aa8.7□□□□□ -1.02
IRF9-208ENST00000560311 POLD1P28340 1107 aa8.7□□□□□ -1.02
IRF9-208ENST00000560311 PRKAR2BP31323 418 aa8.7□□□□□ -1.02
IRF9-208ENST00000560311 FOXC1Q12948 553 aa8.7□□□□□ -1.02
IRF9-208ENST00000560311 MSL1Q68DK7 614 aa8.7□□□□□ -1.02
IRF9-208ENST00000560311 GAS2L2Q8NHY3 880 aa8.7□□□□□ -1.02
IRF9-208ENST00000560311 SLC4A9Q96Q91 983 aa8.7□□□□□ -1.02
IRF9-208ENST00000560311 ARXQ96QS3 562 aa8.7□□□□□ -1.02
IRF9-208ENST00000560311 FHDC1Q9C0D6 1143 aaPredicted RBP8.7□□□□□ -1.02
IRF9-208ENST00000560311 SLC52A2Q9HAB3 445 aa8.7□□□□□ -1.02
IRF9-208ENST00000560311 CNTNAP4Q9C0A0 1308 aa8.7□□□□□ -1.02
IRF9-208ENST00000560311 UBR2Q8IWV8 1755 aa8.7□□□□□ -1.02
IRF9-208ENST00000560311 C4AP0C0L4 1744 aa8.69□□□□□ -1.02
IRF9-208ENST00000560311 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.69□□□□□ -1.02
IRF9-208ENST00000560311 RNMTO43148 476 aaKnown RBP8.69□□□□□ -1.02
IRF9-208ENST00000560311 U2AF1L5P0DN76 240 aaPredicted RBP8.69□□□□□ -1.02
IRF9-208ENST00000560311 U2AF1Q01081 240 aaKnown RBP eCLIP8.69□□□□□ -1.02
IRF9-208ENST00000560311 E2F4Q16254 413 aa8.69□□□□□ -1.02
IRF9-208ENST00000560311 NFATC2IPQ8NCF5 419 aa8.69□□□□□ -1.02
IRF9-208ENST00000560311 FLAD1Q8NFF5 587 aa8.69□□□□□ -1.02
IRF9-208ENST00000560311 CFAP44Q96MT7 982 aa8.69□□□□□ -1.02
IRF9-208ENST00000560311 PKD2L1Q9P0L9 805 aa8.69□□□□□ -1.02
IRF9-208ENST00000560311 GMPR2Q9P2T1 348 aaKnown RBP8.69□□□□□ -1.02
IRF9-208ENST00000560311 NUDCQ9Y266 331 aa8.69□□□□□ -1.02
IRF9-208ENST00000560311 SIPA1L3O60292 1781 aaPredicted RBP8.68□□□□□ -1.02
IRF9-208ENST00000560311 PTCD1O75127 700 aaKnown RBP8.68□□□□□ -1.02
IRF9-208ENST00000560311 PAXIP1Q6ZW49 1069 aaPredicted RBP8.68□□□□□ -1.02
IRF9-208ENST00000560311 SMIM5Q71RC9 77 aa8.68□□□□□ -1.02
IRF9-208ENST00000560311 LGR6Q9HBX8 967 aa8.68□□□□□ -1.02
IRF9-208ENST00000560311 STK17AQ9UEE5 414 aa8.68□□□□□ -1.02
IRF9-208ENST00000560311 CEMIPQ8WUJ3 1361 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms