RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 RIC1Q4ADV7 1423 aa30.2■■■□□ 2.42
CRNDE-209ENST00000560208 ANKRD36CQ5JPF3 1778 aa30.19■■■□□ 2.42
CRNDE-209ENST00000560208 HDGFL1Q5TGJ6 251 aa30.19■■■□□ 2.42
CRNDE-209ENST00000560208 DPY19L2Q6NUT2 758 aa30.19■■■□□ 2.42
CRNDE-209ENST00000560208 CHPF2Q9P2E5 772 aa30.19■■■□□ 2.42
CRNDE-209ENST00000560208 ZNF853P0CG23 659 aa30.18■■■□□ 2.42
CRNDE-209ENST00000560208 OLFM4Q6UX06 510 aa30.18■■■□□ 2.42
CRNDE-209ENST00000560208 RPGRQ92834 1020 aaKnown RBP30.18■■■□□ 2.42
CRNDE-209ENST00000560208 VEGFAP15692 232 aaPredicted RBP30.17■■■□□ 2.42
CRNDE-209ENST00000560208 DUSP27Q5VZP5 1158 aa30.17■■■□□ 2.42
CRNDE-209ENST00000560208 CALD1Q05682 793 aaKnown RBP30.16■■■□□ 2.42
CRNDE-209ENST00000560208 HSP90AB3PQ58FF7 597 aa30.16■■■□□ 2.42
CRNDE-209ENST00000560208 RTKN2Q8IZC4 609 aa30.16■■■□□ 2.42
CRNDE-209ENST00000560208 UTP14AQ9BVJ6 771 aaKnown RBP30.16■■■□□ 2.42
CRNDE-209ENST00000560208 HOXA10P31260 410 aaPredicted RBP30.15■■■□□ 2.42
CRNDE-209ENST00000560208 FKBP4Q02790 459 aaKnown RBP eCLIP30.15■■■□□ 2.42
CRNDE-209ENST00000560208 IFT57Q9NWB7 429 aa30.15■■■□□ 2.42
CRNDE-209ENST00000560208 GNAI1P63096 354 aa30.14■■■□□ 2.42
CRNDE-209ENST00000560208 FSTL1Q12841 308 aa30.14■■■□□ 2.42
CRNDE-209ENST00000560208 TCIRG1Q13488 830 aa30.14■■■□□ 2.42
CRNDE-209ENST00000560208 DBF4Q9UBU7 674 aaPredicted RBP30.14■■■□□ 2.42
CRNDE-209ENST00000560208 APLP1P51693 650 aa30.13■■■□□ 2.41
CRNDE-209ENST00000560208 SLC10A5Q5PT55 438 aa30.12■■■□□ 2.41
CRNDE-209ENST00000560208 C3orf67Q6ZVT6 689 aa30.12■■■□□ 2.41
CRNDE-209ENST00000560208 NLRP10Q86W26 655 aa30.12■■■□□ 2.41
CRNDE-209ENST00000560208 RBM17Q96I25 401 aaKnown RBP30.12■■■□□ 2.41
CRNDE-209ENST00000560208 NLRP3Q96P20 1036 aa30.12■■■□□ 2.41
CRNDE-209ENST00000560208 WDR90Q96KV7 1748 aa30.12■■■□□ 2.41
CRNDE-209ENST00000560208 CRAMP1Q96RY5 1269 aa30.11■■■□□ 2.41
CRNDE-209ENST00000560208 ZNF277Q9NRM2 450 aaPredicted RBP30.11■■■□□ 2.41
CRNDE-209ENST00000560208 POTECB2RU33 542 aa30.1■■■□□ 2.41
CRNDE-209ENST00000560208 PLBD2Q8NHP8 589 aa30.1■■■□□ 2.41
CRNDE-209ENST00000560208 HYPKQ9NX55 129 aa30.1■■■□□ 2.41
CRNDE-209ENST00000560208 RNF123Q5XPI4 1314 aa30.1■■■□□ 2.41
CRNDE-209ENST00000560208 CC2D2BQ6DHV5 1058 aa30.09■■■□□ 2.41
CRNDE-209ENST00000560208 ANKRD13DQ6ZTN6 518 aa30.09■■■□□ 2.41
CRNDE-209ENST00000560208 MIER1Q8N108 512 aa30.09■■■□□ 2.41
CRNDE-209ENST00000560208 SMC1BQ8NDV3 1235 aa30.09■■■□□ 2.41
CRNDE-209ENST00000560208 CCER2I3L3R5 266 aa30.08■■■□□ 2.41
CRNDE-209ENST00000560208 SYNE4Q8N205 404 aa30.08■■■□□ 2.41
CRNDE-209ENST00000560208 ELL2O00472 640 aaPredicted RBP30.07■■■□□ 2.4
CRNDE-209ENST00000560208 DDNO94850 711 aaPredicted RBP30.07■■■□□ 2.4
CRNDE-209ENST00000560208 TRMT112Q9UI30 125 aaKnown RBP30.07■■■□□ 2.4
CRNDE-209ENST00000560208 LAMB2P55268 1798 aa30.06■■■□□ 2.4
CRNDE-209ENST00000560208 PSMD1Q99460 953 aa30.06■■■□□ 2.4
CRNDE-209ENST00000560208 SNED1Q8TER0 1413 aa30.05■■■□□ 2.4
CRNDE-209ENST00000560208 PPEF1O14829 653 aaPredicted RBP30.05■■■□□ 2.4
CRNDE-209ENST00000560208 HCLS1P14317 486 aaPredicted RBP30.05■■■□□ 2.4
CRNDE-209ENST00000560208 IARSP41252 1262 aaKnown RBP30.05■■■□□ 2.4
CRNDE-209ENST00000560208 TCERG1O14776 1098 aaKnown RBP30.04■■■□□ 2.4
CRNDE-209ENST00000560208 C8orf58Q8NAV2 365 aa30.04■■■□□ 2.4
CRNDE-209ENST00000560208 SH3TC1Q8TE82 1336 aa30.03■■■□□ 2.4
CRNDE-209ENST00000560208 GRIPAP1Q4V328 841 aa30.03■■■□□ 2.4
CRNDE-209ENST00000560208 SALL2Q9Y467 1007 aaPredicted RBP30.03■■■□□ 2.4
CRNDE-209ENST00000560208 ZNF428Q96B54 188 aa30.02■■■□□ 2.4
CRNDE-209ENST00000560208 ISCA1Q9BUE6 129 aa30.02■■■□□ 2.4
CRNDE-209ENST00000560208 ATP5J2-PTCD1G3V325 749 aa30.01■■■□□ 2.39
CRNDE-209ENST00000560208 CCDC27Q2M243 656 aa30■■■□□ 2.39
CRNDE-209ENST00000560208 SLC51AQ86UW1 340 aa30■■■□□ 2.39
CRNDE-209ENST00000560208 ABCC4O15439 1325 aa29.99■■■□□ 2.39
CRNDE-209ENST00000560208 ZNF541Q9H0D2 1346 aa29.99■■■□□ 2.39
CRNDE-209ENST00000560208 DNAJC5GQ8N7S2 189 aa29.99■■■□□ 2.39
CRNDE-209ENST00000560208 TMX4Q9H1E5 349 aaPredicted RBP29.99■■■□□ 2.39
CRNDE-209ENST00000560208 PHAXQ9H814 394 aaKnown RBP29.99■■■□□ 2.39
CRNDE-209ENST00000560208 RIC3Q7Z5B4 369 aa29.98■■■□□ 2.39
CRNDE-209ENST00000560208 WWC1Q8IX03 1113 aa29.98■■■□□ 2.39
CRNDE-209ENST00000560208 JDP2Q8WYK2 163 aa29.98■■■□□ 2.39
CRNDE-209ENST00000560208 ATP6V0A2Q9Y487 856 aa29.98■■■□□ 2.39
CRNDE-209ENST00000560208 SCN4AP35499 1836 aa29.98■■■□□ 2.39
CRNDE-209ENST00000560208 FZD9O00144 591 aa29.97■■■□□ 2.39
CRNDE-209ENST00000560208 GOLGA2Q08379 1002 aa29.97■■■□□ 2.39
CRNDE-209ENST00000560208 L3MBTL3Q96JM7 780 aaPredicted RBP29.97■■■□□ 2.39
CRNDE-209ENST00000560208 CHMP4AQ9BY43 222 aa29.97■■■□□ 2.39
CRNDE-209ENST00000560208 TAF1P21675 1872 aa29.97■■■□□ 2.39
CRNDE-209ENST00000560208 DDX60Q8IY21 1712 aaKnown RBP29.96■■■□□ 2.39
CRNDE-209ENST00000560208 IQCA1LA6NCM1 817 aa29.96■■■□□ 2.39
CRNDE-209ENST00000560208 BBOX1O75936 387 aa29.96■■■□□ 2.39
CRNDE-209ENST00000560208 HTRA3P83110 453 aa29.96■■■□□ 2.39
CRNDE-209ENST00000560208 TRIM28Q13263 835 aaKnown RBP29.96■■■□□ 2.39
CRNDE-209ENST00000560208 CCDC30Q5VVM6 783 aa29.96■■■□□ 2.39
CRNDE-209ENST00000560208 DDX46Q7L014 1031 aaKnown RBP29.96■■■□□ 2.39
CRNDE-209ENST00000560208 TSPYL6Q8N831 410 aa29.96■■■□□ 2.39
CRNDE-209ENST00000560208 TSR2Q969E8 191 aaKnown RBP29.96■■■□□ 2.39
CRNDE-209ENST00000560208 FAM89AQ96GI7 184 aa29.95■■■□□ 2.39
CRNDE-209ENST00000560208 COL4A5P29400 1685 aa29.93■■■□□ 2.38
CRNDE-209ENST00000560208 NCBP3Q53F19 620 aaKnown RBP29.93■■■□□ 2.38
CRNDE-209ENST00000560208 LARGE2Q8N3Y3 721 aa29.93■■■□□ 2.38
CRNDE-209ENST00000560208 GRAPQ13588 217 aa29.92■■■□□ 2.38
CRNDE-209ENST00000560208 SP8Q8IXZ3 490 aa29.92■■■□□ 2.38
CRNDE-209ENST00000560208 GRAPLQ8TC17 118 aaPredicted RBP29.92■■■□□ 2.38
CRNDE-209ENST00000560208 TAF1DQ9H5J8 278 aaPredicted RBP29.92■■■□□ 2.38
CRNDE-209ENST00000560208 POTEIP0CG38 1075 aa29.91■■■□□ 2.38
CRNDE-209ENST00000560208 POTEJP0CG39 1038 aa29.91■■■□□ 2.38
CRNDE-209ENST00000560208 RTL5Q5HYW3 569 aaPredicted RBP29.91■■■□□ 2.38
CRNDE-209ENST00000560208 CHADLQ6NUI6 762 aa29.91■■■□□ 2.38
CRNDE-209ENST00000560208 IL16Q14005 1332 aa29.91■■■□□ 2.38
CRNDE-209ENST00000560208 EIF6P56537 245 aaKnown RBP29.9■■■□□ 2.38
CRNDE-209ENST00000560208 GPC2Q8N158 579 aa29.9■■■□□ 2.38
CRNDE-209ENST00000560208 DDX58O95786 925 aaKnown RBP29.89■■■□□ 2.38
CRNDE-209ENST00000560208 SF3B3Q15393 1217 aaKnown RBP29.89■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms