RNA–Protein interactions for RNA: ENST00000560166.1

CLPX-206, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 3

Gene CLPX, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-206ENST00000560166 IRS1P35568 1242 aa8.44□□□□□ -1.06
CLPX-206ENST00000560166 RFC5P40937 340 aa8.44□□□□□ -1.06
CLPX-206ENST00000560166 GUCA2AQ02747 115 aa8.44□□□□□ -1.06
CLPX-206ENST00000560166 DIXDC1Q155Q3 683 aa8.44□□□□□ -1.06
CLPX-206ENST00000560166 UNC93B1Q9H1C4 597 aa8.44□□□□□ -1.06
CLPX-206ENST00000560166 LIMD1Q9UGP4 676 aa8.44□□□□□ -1.06
CLPX-206ENST00000560166 CHD2O14647 1828 aaKnown RBP8.44□□□□□ -1.06
CLPX-206ENST00000560166 PLEKHH1Q9ULM0 1364 aa8.44□□□□□ -1.06
CLPX-206ENST00000560166 WASLO00401 505 aaPredicted RBP8.43□□□□□ -1.06
CLPX-206ENST00000560166 KANK3Q6NY19 840 aa8.43□□□□□ -1.06
CLPX-206ENST00000560166 SPIRE2Q8WWL2 714 aa8.43□□□□□ -1.06
CLPX-206ENST00000560166 PRKRIP1Q9H875 184 aaPredicted RBP8.43□□□□□ -1.06
CLPX-206ENST00000560166 PODXL2Q9NZ53 605 aa8.43□□□□□ -1.06
CLPX-206ENST00000560166 ANKRD36BQ8N2N9 1353 aa8.43□□□□□ -1.06
CLPX-206ENST00000560166 ANKARQ7Z5J8 1434 aa8.43□□□□□ -1.06
CLPX-206ENST00000560166 ATP7BP35670 1465 aa8.43□□□□□ -1.06
CLPX-206ENST00000560166 LRP5O75197 1615 aa8.43□□□□□ -1.06
CLPX-206ENST00000560166 MYOM1P52179 1685 aa8.43□□□□□ -1.06
CLPX-206ENST00000560166 SPDYE5A6NIY4 337 aa8.42□□□□□ -1.06
CLPX-206ENST00000560166 ARHGEF15O94989 841 aa8.42□□□□□ -1.06
CLPX-206ENST00000560166 RALBP1Q15311 655 aa8.42□□□□□ -1.06
CLPX-206ENST00000560166 LINC01559Q495D7 138 aa8.42□□□□□ -1.06
CLPX-206ENST00000560166 RIC3Q7Z5B4 369 aa8.42□□□□□ -1.06
CLPX-206ENST00000560166 WAPLQ7Z5K2 1190 aa8.42□□□□□ -1.06
CLPX-206ENST00000560166 ZNF511Q8NB15 262 aa8.42□□□□□ -1.06
CLPX-206ENST00000560166 PANK3Q9H999 370 aa8.42□□□□□ -1.06
CLPX-206ENST00000560166 SNRKQ9NRH2 765 aa8.42□□□□□ -1.06
CLPX-206ENST00000560166 NSD2O96028 1365 aa8.42□□□□□ -1.06
CLPX-206ENST00000560166 BLMP54132 1417 aaPredicted RBP8.42□□□□□ -1.06
CLPX-206ENST00000560166 USP32Q8NFA0 1604 aa8.41□□□□□ -1.06
CLPX-206ENST00000560166 CDC42BPGQ6DT37 1551 aa8.41□□□□□ -1.06
CLPX-206ENST00000560166 ADGRL3Q9HAR2 1447 aa8.41□□□□□ -1.06
CLPX-206ENST00000560166 PARD3Q8TEW0 1356 aa8.41□□□□□ -1.06
CLPX-206ENST00000560166 SRPK2P78362 688 aaKnown RBP8.41□□□□□ -1.06
CLPX-206ENST00000560166 C6orf118Q5T5N4 469 aa8.41□□□□□ -1.06
CLPX-206ENST00000560166 CDK15Q96Q40 435 aa8.41□□□□□ -1.06
CLPX-206ENST00000560166 POLR3GLQ9BT43 218 aa8.41□□□□□ -1.06
CLPX-206ENST00000560166 CDK19Q9BWU1 502 aa8.41□□□□□ -1.06
CLPX-206ENST00000560166 TERF2IPQ9NYB0 399 aa8.41□□□□□ -1.06
CLPX-206ENST00000560166 KNSTRNQ9Y448 316 aa8.41□□□□□ -1.06
CLPX-206ENST00000560166 NHSL1Q5SYE7 1610 aa8.4□□□□□ -1.06
CLPX-206ENST00000560166 ATRNO75882 1429 aa8.4□□□□□ -1.06
CLPX-206ENST00000560166 SOS2Q07890 1332 aaPredicted RBP8.4□□□□□ -1.06
CLPX-206ENST00000560166 ZIC2O95409 532 aaPredicted RBP8.4□□□□□ -1.06
CLPX-206ENST00000560166 KCNH2Q12809 1159 aa8.4□□□□□ -1.06
CLPX-206ENST00000560166 PTPRNQ16849 979 aa8.4□□□□□ -1.06
CLPX-206ENST00000560166 CSPP1Q1MSJ5 1256 aa8.4□□□□□ -1.06
CLPX-206ENST00000560166 NUTM1Q86Y26 1132 aa8.4□□□□□ -1.06
CLPX-206ENST00000560166 FNBP4Q8N3X1 1017 aaPredicted RBP8.4□□□□□ -1.06
CLPX-206ENST00000560166 BANK1Q8NDB2 785 aa8.4□□□□□ -1.06
CLPX-206ENST00000560166 NANOS1Q8WY41 292 aaKnown RBP8.4□□□□□ -1.06
CLPX-206ENST00000560166 COL25A1Q9BXS0 654 aaPredicted RBP8.4□□□□□ -1.06
CLPX-206ENST00000560166 ZFAND3Q9H8U3 227 aa8.4□□□□□ -1.06
CLPX-206ENST00000560166 COG6Q9Y2V7 657 aa8.4□□□□□ -1.06
CLPX-206ENST00000560166 DCCP43146 1447 aa8.39□□□□□ -1.07
CLPX-206ENST00000560166 MST1RQ04912 1400 aa8.39□□□□□ -1.07
CLPX-206ENST00000560166 ADAM23O75077 832 aa8.39□□□□□ -1.07
CLPX-206ENST00000560166 SLURP2P0DP57 97 aa8.39□□□□□ -1.07
CLPX-206ENST00000560166 SAFB2Q14151 953 aaKnown RBP eCLIP8.39□□□□□ -1.07
CLPX-206ENST00000560166 SVOPQ8N4V2 548 aa8.39□□□□□ -1.07
CLPX-206ENST00000560166 ITPKCQ96DU7 683 aa8.39□□□□□ -1.07
CLPX-206ENST00000560166 DNMT3LQ9UJW3 386 aa8.39□□□□□ -1.07
CLPX-206ENST00000560166 CPSF1Q10570 1443 aaKnown RBP8.38□□□□□ -1.07
CLPX-206ENST00000560166 BRD4O60885 1362 aaPredicted RBP8.38□□□□□ -1.07
CLPX-206ENST00000560166 CGNL1Q0VF96 1302 aa8.38□□□□□ -1.07
CLPX-206ENST00000560166 MYBBP1AQ9BQG0 1328 aaKnown RBP8.38□□□□□ -1.07
CLPX-206ENST00000560166 TMEM259Q4ZIN3 620 aa8.38□□□□□ -1.07
CLPX-206ENST00000560166 PPP2R2DQ66LE6 453 aa8.38□□□□□ -1.07
CLPX-206ENST00000560166 HDGFL2Q7Z4V5 671 aaPredicted RBP8.38□□□□□ -1.07
CLPX-206ENST00000560166 WHAMMQ8TF30 809 aa8.38□□□□□ -1.07
CLPX-206ENST00000560166 GJD4Q96KN9 370 aaPredicted RBP8.38□□□□□ -1.07
CLPX-206ENST00000560166 CD163L1Q9NR16 1453 aa8.38□□□□□ -1.07
CLPX-206ENST00000560166 A0A1W2PP64 1363 aa8.37□□□□□ -1.07
CLPX-206ENST00000560166 MOXD2PA6NHM9 499 aa8.37□□□□□ -1.07
CLPX-206ENST00000560166 SPTLC1O15269 473 aa8.37□□□□□ -1.07
CLPX-206ENST00000560166 BMP2P12643 396 aa8.37□□□□□ -1.07
CLPX-206ENST00000560166 RNFT1Q5M7Z0 435 aa8.37□□□□□ -1.07
CLPX-206ENST00000560166 RSBN1LQ6PCB5 846 aaPredicted RBP8.37□□□□□ -1.07
CLPX-206ENST00000560166 FAM174AQ8TBP5 190 aa8.37□□□□□ -1.07
CLPX-206ENST00000560166 NUDT16Q96DE0 195 aaKnown RBP8.37□□□□□ -1.07
CLPX-206ENST00000560166 CARD14Q9BXL6 1004 aa8.37□□□□□ -1.07
CLPX-206ENST00000560166 SLC12A5Q9H2X9 1139 aa8.37□□□□□ -1.07
CLPX-206ENST00000560166 EDC4Q6P2E9 1401 aaKnown RBP8.37□□□□□ -1.07
CLPX-206ENST00000560166 PPIP5K1Q6PFW1 1433 aa8.37□□□□□ -1.07
CLPX-206ENST00000560166 NSD3Q9BZ95 1437 aa8.37□□□□□ -1.07
CLPX-206ENST00000560166 POLR3AO14802 1390 aaPredicted RBP8.36□□□□□ -1.07
CLPX-206ENST00000560166 NDUFV2P19404 249 aa8.36□□□□□ -1.07
CLPX-206ENST00000560166 BAG6P46379 1132 aa8.36□□□□□ -1.07
CLPX-206ENST00000560166 MARSP56192 900 aaKnown RBP8.36□□□□□ -1.07
CLPX-206ENST00000560166 NR5A1Q13285 461 aa8.36□□□□□ -1.07
CLPX-206ENST00000560166 NLRP13Q86W25 1043 aa8.36□□□□□ -1.07
CLPX-206ENST00000560166 LINC00528Q8N1L1 170 aa8.36□□□□□ -1.07
CLPX-206ENST00000560166 TMC1Q8TDI8 760 aa8.36□□□□□ -1.07
CLPX-206ENST00000560166 SCARF2Q96GP6 870 aaPredicted RBP8.36□□□□□ -1.07
CLPX-206ENST00000560166 PCDHGC3Q9UN70 934 aa8.36□□□□□ -1.07
CLPX-206ENST00000560166 TOPAZ1Q8N9V7 1692 aa8.36□□□□□ -1.07
CLPX-206ENST00000560166 INSRP06213 1382 aa8.35□□□□□ -1.07
CLPX-206ENST00000560166 PRR36Q9H6K5 1346 aa8.35□□□□□ -1.07
CLPX-206ENST00000560166 SENP3-EIF4A1A0A087X0R7 540 aa8.35□□□□□ -1.07
CLPX-206ENST00000560166 UPP2O95045 317 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms