RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-222ENST00000560131 CCDC87Q9NVE4 849 aa6.95□□□□□ -1.3
TPM1-222ENST00000560131 SCHIP1Q9P0W5 487 aaPredicted RBP6.95□□□□□ -1.3
TPM1-222ENST00000560131 AQRO60306 1485 aaKnown RBP eCLIP6.95□□□□□ -1.3
TPM1-222ENST00000560131 UACAQ9BZF9 1416 aa6.94□□□□□ -1.3
TPM1-222ENST00000560131 A6NJY4 79 aa6.94□□□□□ -1.3
TPM1-222ENST00000560131 PRPF40AO75400 957 aaKnown RBP6.94□□□□□ -1.3
TPM1-222ENST00000560131 LDHBP07195 334 aaKnown RBP6.94□□□□□ -1.3
TPM1-222ENST00000560131 ANP32AP39687 249 aaKnown RBP6.94□□□□□ -1.3
TPM1-222ENST00000560131 GRM5P41594 1212 aa6.94□□□□□ -1.3
TPM1-222ENST00000560131 MAPK8P45983 427 aa6.94□□□□□ -1.3
TPM1-222ENST00000560131 SMTNP53814 917 aa6.94□□□□□ -1.3
TPM1-222ENST00000560131 EHHADHQ08426 723 aa6.94□□□□□ -1.3
TPM1-222ENST00000560131 PDE3BQ13370 1112 aa6.94□□□□□ -1.3
TPM1-222ENST00000560131 ARID5BQ14865 1188 aa6.94□□□□□ -1.3
TPM1-222ENST00000560131 SF3A1Q15459 793 aaKnown RBP6.94□□□□□ -1.3
TPM1-222ENST00000560131 LDLRAD1Q5T700 205 aa6.94□□□□□ -1.3
TPM1-222ENST00000560131 CYP2U1Q7Z449 544 aa6.94□□□□□ -1.3
TPM1-222ENST00000560131 PUS7Q96PZ0 661 aaKnown RBP6.94□□□□□ -1.3
TPM1-222ENST00000560131 FAM129BQ96TA1 746 aa6.94□□□□□ -1.3
TPM1-222ENST00000560131 PARP2Q9UGN5 583 aa6.94□□□□□ -1.3
TPM1-222ENST00000560131 SMG6Q86US8 1419 aaKnown RBP6.93□□□□□ -1.3
TPM1-222ENST00000560131 CNTLNQ9NXG0 1405 aa6.93□□□□□ -1.3
TPM1-222ENST00000560131 ATAD2BQ9ULI0 1458 aa6.93□□□□□ -1.3
TPM1-222ENST00000560131 TNFRSF10BO14763 440 aa6.93□□□□□ -1.3
TPM1-222ENST00000560131 SLURP2P0DP57 97 aa6.93□□□□□ -1.3
TPM1-222ENST00000560131 HDLBPQ00341 1268 aaKnown RBP6.93□□□□□ -1.3
TPM1-222ENST00000560131 MTFR1Q15390 333 aa6.93□□□□□ -1.3
TPM1-222ENST00000560131 SLC9A9Q8IVB4 645 aa6.93□□□□□ -1.3
TPM1-222ENST00000560131 Q8N3U1 123 aa6.93□□□□□ -1.3
TPM1-222ENST00000560131 ABTB2Q8N961 1025 aa6.93□□□□□ -1.3
TPM1-222ENST00000560131 TMEM87AQ8NBN3 555 aa6.93□□□□□ -1.3
TPM1-222ENST00000560131 SPOCK3Q9BQ16 436 aa6.93□□□□□ -1.3
TPM1-222ENST00000560131 CDK2AP1O14519 115 aa6.92□□□□□ -1.3
TPM1-222ENST00000560131 LILRA1O75019 489 aa6.92□□□□□ -1.3
TPM1-222ENST00000560131 UPP2O95045 317 aa6.92□□□□□ -1.3
TPM1-222ENST00000560131 IGHA2P01877 340 aa6.92□□□□□ -1.3
TPM1-222ENST00000560131 BRD2P25440 801 aaKnown RBP6.92□□□□□ -1.3
TPM1-222ENST00000560131 PSMA6P60900 246 aaKnown RBP6.92□□□□□ -1.3
TPM1-222ENST00000560131 DAB2P98082 770 aa6.92□□□□□ -1.3
TPM1-222ENST00000560131 HNRNPUQ00839 825 aaKnown RBP eCLIP6.92□□□□□ -1.3
TPM1-222ENST00000560131 PLA2G4EQ3MJ16 856 aa6.92□□□□□ -1.3
TPM1-222ENST00000560131 TBCELQ5QJ74 424 aa6.92□□□□□ -1.3
TPM1-222ENST00000560131 TMC4Q7Z404 712 aa6.92□□□□□ -1.3
TPM1-222ENST00000560131 FAM177A1Q8N128 213 aaPredicted RBP6.92□□□□□ -1.3
TPM1-222ENST00000560131 ZNF784Q8NCA9 323 aaPredicted RBP6.92□□□□□ -1.3
TPM1-222ENST00000560131 NANOS1Q8WY41 292 aaKnown RBP6.92□□□□□ -1.3
TPM1-222ENST00000560131 UBXN4Q92575 508 aa6.92□□□□□ -1.3
TPM1-222ENST00000560131 ALKBH8Q96BT7 664 aaKnown RBP6.92□□□□□ -1.3
TPM1-222ENST00000560131 XAGE2Q96GT9 111 aa6.92□□□□□ -1.3
TPM1-222ENST00000560131 MYO19Q96H55 970 aa6.92□□□□□ -1.3
TPM1-222ENST00000560131 DUSP9Q99956 384 aaKnown RBP6.92□□□□□ -1.3
TPM1-222ENST00000560131 MRS2Q9HD23 443 aa6.92□□□□□ -1.3
TPM1-222ENST00000560131 CHMP3Q9Y3E7 222 aa6.92□□□□□ -1.3
TPM1-222ENST00000560131 TONSLQ96HA7 1378 aa6.92□□□□□ -1.3
TPM1-222ENST00000560131 HFM1A2PYH4 1435 aa6.92□□□□□ -1.3
TPM1-222ENST00000560131 CCDC18Q5T9S5 1454 aa6.92□□□□□ -1.3
TPM1-222ENST00000560131 BICRAQ9NZM4 1560 aa6.91□□□□□ -1.3
TPM1-222ENST00000560131 SORBS3O60504 671 aa6.91□□□□□ -1.3
TPM1-222ENST00000560131 BMP2P12643 396 aa6.91□□□□□ -1.3
TPM1-222ENST00000560131 HSP90B1P14625 803 aaKnown RBP6.91□□□□□ -1.3
TPM1-222ENST00000560131 FSHRP23945 695 aa6.91□□□□□ -1.3
TPM1-222ENST00000560131 ATP2B2Q01814 1243 aa6.91□□□□□ -1.3
TPM1-222ENST00000560131 RNFT1Q5M7Z0 435 aa6.91□□□□□ -1.3
TPM1-222ENST00000560131 C9orf131Q5VYM1 1079 aa6.91□□□□□ -1.3
TPM1-222ENST00000560131 QTRT2Q9H974 415 aaKnown RBP6.91□□□□□ -1.3
TPM1-222ENST00000560131 PPP1R1BQ9UD71 204 aaPredicted RBP6.91□□□□□ -1.3
TPM1-222ENST00000560131 LRFN2Q9ULH4 789 aa6.91□□□□□ -1.3
TPM1-222ENST00000560131 PHLDB1Q86UU1 1377 aa6.91□□□□□ -1.3
TPM1-222ENST00000560131 FYCO1Q9BQS8 1478 aa6.91□□□□□ -1.3
TPM1-222ENST00000560131 EFCAB5A4FU69 1503 aa6.91□□□□□ -1.3
TPM1-222ENST00000560131 PRDM2Q13029 1718 aa6.9□□□□□ -1.3
TPM1-222ENST00000560131 GPR182O15218 404 aa6.9□□□□□ -1.3
TPM1-222ENST00000560131 PPM1GO15355 546 aaPredicted RBP6.9□□□□□ -1.3
TPM1-222ENST00000560131 ZIC2O95409 532 aaPredicted RBP6.9□□□□□ -1.3
TPM1-222ENST00000560131 ADD1P35611 737 aaKnown RBP6.9□□□□□ -1.3
TPM1-222ENST00000560131 POTEAQ6S8J7 498 aa6.9□□□□□ -1.3
TPM1-222ENST00000560131 CCDC116Q8IYX3 515 aa6.9□□□□□ -1.3
TPM1-222ENST00000560131 PIK3R5Q8WYR1 880 aa6.9□□□□□ -1.3
TPM1-222ENST00000560131 CCDC136Q96JN2 1154 aa6.9□□□□□ -1.3
TPM1-222ENST00000560131 METTL5Q9NRN9 209 aaKnown RBP6.9□□□□□ -1.3
TPM1-222ENST00000560131 DNMT3LQ9UJW3 386 aa6.9□□□□□ -1.3
TPM1-222ENST00000560131 AKNAQ7Z591 1439 aa6.9□□□□□ -1.31
TPM1-222ENST00000560131 HECW1Q76N89 1606 aa6.9□□□□□ -1.31
TPM1-222ENST00000560131 PTPN23Q9H3S7 1636 aa6.9□□□□□ -1.31
TPM1-222ENST00000560131 K7ELQ4 463 aaPredicted RBP6.89□□□□□ -1.31
TPM1-222ENST00000560131 ZBTB39O15060 712 aa6.89□□□□□ -1.31
TPM1-222ENST00000560131 PSMD2Q13200 908 aa6.89□□□□□ -1.31
TPM1-222ENST00000560131 NR5A1Q13285 461 aa6.89□□□□□ -1.31
TPM1-222ENST00000560131 PPP1R26Q5T8A7 1209 aaPredicted RBP6.89□□□□□ -1.31
TPM1-222ENST00000560131 ALG1LQ6GMV1 187 aa6.89□□□□□ -1.31
TPM1-222ENST00000560131 METTL16Q86W50 562 aaKnown RBP6.89□□□□□ -1.31
TPM1-222ENST00000560131 FAM161BQ96MY7 647 aa6.89□□□□□ -1.31
TPM1-222ENST00000560131 SIN3AQ96ST3 1273 aa6.89□□□□□ -1.31
TPM1-222ENST00000560131 NIF3L1Q9GZT8 377 aa6.89□□□□□ -1.31
TPM1-222ENST00000560131 ZFAND3Q9H8U3 227 aa6.89□□□□□ -1.31
TPM1-222ENST00000560131 WWC3Q9ULE0 1092 aa6.89□□□□□ -1.31
TPM1-222ENST00000560131 SOS2Q07890 1332 aaPredicted RBP6.89□□□□□ -1.31
TPM1-222ENST00000560131 NCOA1Q15788 1441 aa6.89□□□□□ -1.31
TPM1-222ENST00000560131 CUX1P39880 1505 aa6.89□□□□□ -1.31
TPM1-222ENST00000560131 MZF1P28698 734 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms