RNA–Protein interactions for RNA: ENST00000559889.5

IDH3A-217, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,461 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-217ENST00000559889 RIC1Q4ADV7 1423 aa11.79□□□□□ -0.52
IDH3A-217ENST00000559889 HOXB7P09629 217 aa11.78□□□□□ -0.52
IDH3A-217ENST00000559889 SOGA3Q5TF21 947 aa11.78□□□□□ -0.52
IDH3A-217ENST00000559889 XAGE3Q8WTP9 111 aa11.78□□□□□ -0.52
IDH3A-217ENST00000559889 CHPF2Q9P2E5 772 aa11.78□□□□□ -0.52
IDH3A-217ENST00000559889 TIAM2Q8IVF5 1701 aa11.78□□□□□ -0.52
IDH3A-217ENST00000559889 C3orf67Q6ZVT6 689 aa11.78□□□□□ -0.52
IDH3A-217ENST00000559889 CACNA1SQ13698 1873 aa11.77□□□□□ -0.52
IDH3A-217ENST00000559889 SNED1Q8TER0 1413 aa11.77□□□□□ -0.52
IDH3A-217ENST00000559889 AIMP1Q12904 312 aaKnown RBP11.77□□□□□ -0.53
IDH3A-217ENST00000559889 POTECB2RU33 542 aa11.77□□□□□ -0.53
IDH3A-217ENST00000559889 ALDH1B1P30837 517 aa11.77□□□□□ -0.53
IDH3A-217ENST00000559889 HOXA10P31260 410 aaPredicted RBP11.77□□□□□ -0.53
IDH3A-217ENST00000559889 PARP10Q53GL7 1025 aa11.77□□□□□ -0.53
IDH3A-217ENST00000559889 CCDC93Q567U6 631 aa11.77□□□□□ -0.53
IDH3A-217ENST00000559889 HDGFL1Q5TGJ6 251 aa11.77□□□□□ -0.53
IDH3A-217ENST00000559889 RBM46Q8TBY0 533 aaKnown RBP11.77□□□□□ -0.53
IDH3A-217ENST00000559889 CCDC88AQ3V6T2 1871 aa11.76□□□□□ -0.53
IDH3A-217ENST00000559889 DUSP27Q5VZP5 1158 aa11.76□□□□□ -0.53
IDH3A-217ENST00000559889 PPP1R42Q7Z4L9 355 aa11.76□□□□□ -0.53
IDH3A-217ENST00000559889 IFT57Q9NWB7 429 aa11.76□□□□□ -0.53
IDH3A-217ENST00000559889 SLC10A5Q5PT55 438 aa11.76□□□□□ -0.53
IDH3A-217ENST00000559889 SLC51AQ86UW1 340 aa11.76□□□□□ -0.53
IDH3A-217ENST00000559889 FKBP4Q02790 459 aaKnown RBP eCLIP11.75□□□□□ -0.53
IDH3A-217ENST00000559889 TCIRG1Q13488 830 aa11.75□□□□□ -0.53
IDH3A-217ENST00000559889 NLRP10Q86W26 655 aa11.75□□□□□ -0.53
IDH3A-217ENST00000559889 UTP14AQ9BVJ6 771 aaKnown RBP11.75□□□□□ -0.53
IDH3A-217ENST00000559889 DBF4Q9UBU7 674 aaPredicted RBP11.75□□□□□ -0.53
IDH3A-217ENST00000559889 PCNTO95613 3336 aa11.75□□□□□ -0.53
IDH3A-217ENST00000559889 VEGFAP15692 232 aaPredicted RBP11.75□□□□□ -0.53
IDH3A-217ENST00000559889 SYNE4Q8N205 404 aa11.75□□□□□ -0.53
IDH3A-217ENST00000559889 DICER1Q9UPY3 1922 aaKnown RBP11.74□□□□□ -0.53
IDH3A-217ENST00000559889 GNAI1P63096 354 aa11.74□□□□□ -0.53
IDH3A-217ENST00000559889 C16orf71Q8IYS4 520 aaPredicted RBP11.74□□□□□ -0.53
IDH3A-217ENST00000559889 RTKN2Q8IZC4 609 aa11.74□□□□□ -0.53
IDH3A-217ENST00000559889 ZNF277Q9NRM2 450 aaPredicted RBP11.74□□□□□ -0.53
IDH3A-217ENST00000559889 CALD1Q05682 793 aaKnown RBP11.74□□□□□ -0.53
IDH3A-217ENST00000559889 FSTL1Q12841 308 aa11.74□□□□□ -0.53
IDH3A-217ENST00000559889 HSP90AB3PQ58FF7 597 aa11.74□□□□□ -0.53
IDH3A-217ENST00000559889 DPY19L2Q6NUT2 758 aa11.74□□□□□ -0.53
IDH3A-217ENST00000559889 C8orf58Q8NAV2 365 aa11.74□□□□□ -0.53
IDH3A-217ENST00000559889 PLBD2Q8NHP8 589 aa11.74□□□□□ -0.53
IDH3A-217ENST00000559889 RPGRQ92834 1020 aaKnown RBP11.74□□□□□ -0.53
IDH3A-217ENST00000559889 CRAMP1Q96RY5 1269 aa11.74□□□□□ -0.53
IDH3A-217ENST00000559889 RNF123Q5XPI4 1314 aa11.73□□□□□ -0.53
IDH3A-217ENST00000559889 WDR90Q96KV7 1748 aa11.73□□□□□ -0.53
IDH3A-217ENST00000559889 ANKRD13DQ6ZTN6 518 aa11.73□□□□□ -0.53
IDH3A-217ENST00000559889 ELL2O00472 640 aaPredicted RBP11.72□□□□□ -0.53
IDH3A-217ENST00000559889 DDNO94850 711 aaPredicted RBP11.72□□□□□ -0.53
IDH3A-217ENST00000559889 NLRP3Q96P20 1036 aa11.72□□□□□ -0.53
IDH3A-217ENST00000559889 HYPKQ9NX55 129 aa11.72□□□□□ -0.53
IDH3A-217ENST00000559889 ANKRD36CQ5JPF3 1778 aa11.72□□□□□ -0.53
IDH3A-217ENST00000559889 APLP1P51693 650 aa11.72□□□□□ -0.53
IDH3A-217ENST00000559889 CCDC27Q2M243 656 aa11.72□□□□□ -0.53
IDH3A-217ENST00000559889 RBM17Q96I25 401 aaKnown RBP11.72□□□□□ -0.53
IDH3A-217ENST00000559889 PSMD1Q99460 953 aa11.72□□□□□ -0.53
IDH3A-217ENST00000559889 ISCA1Q9BUE6 129 aa11.72□□□□□ -0.53
IDH3A-217ENST00000559889 HCLS1P14317 486 aaPredicted RBP11.71□□□□□ -0.53
IDH3A-217ENST00000559889 DNAJC5GQ8N7S2 189 aa11.71□□□□□ -0.53
IDH3A-217ENST00000559889 ZNF428Q96B54 188 aa11.71□□□□□ -0.53
IDH3A-217ENST00000559889 TRMT112Q9UI30 125 aaKnown RBP11.71□□□□□ -0.53
IDH3A-217ENST00000559889 CC2D2BQ6DHV5 1058 aa11.71□□□□□ -0.53
IDH3A-217ENST00000559889 WWC1Q8IX03 1113 aa11.71□□□□□ -0.53
IDH3A-217ENST00000559889 TSPYL6Q8N831 410 aa11.71□□□□□ -0.53
IDH3A-217ENST00000559889 SMC1BQ8NDV3 1235 aa11.71□□□□□ -0.53
IDH3A-217ENST00000559889 PHAXQ9H814 394 aaKnown RBP11.71□□□□□ -0.53
IDH3A-217ENST00000559889 COL4A5P29400 1685 aa11.71□□□□□ -0.54
IDH3A-217ENST00000559889 PPEF1O14829 653 aaPredicted RBP11.7□□□□□ -0.54
IDH3A-217ENST00000559889 IARSP41252 1262 aaKnown RBP11.7□□□□□ -0.54
IDH3A-217ENST00000559889 ABCC4O15439 1325 aa11.7□□□□□ -0.54
IDH3A-217ENST00000559889 SH3TC1Q8TE82 1336 aa11.7□□□□□ -0.54
IDH3A-217ENST00000559889 ZNF541Q9H0D2 1346 aa11.7□□□□□ -0.54
IDH3A-217ENST00000559889 ATP5J2-PTCD1G3V325 749 aa11.7□□□□□ -0.54
IDH3A-217ENST00000559889 FZD9O00144 591 aa11.7□□□□□ -0.54
IDH3A-217ENST00000559889 TSR2Q969E8 191 aaKnown RBP11.7□□□□□ -0.54
IDH3A-217ENST00000559889 L3MBTL3Q96JM7 780 aaPredicted RBP11.7□□□□□ -0.54
IDH3A-217ENST00000559889 TCERG1O14776 1098 aaKnown RBP11.69□□□□□ -0.54
IDH3A-217ENST00000559889 HTRA3P83110 453 aa11.69□□□□□ -0.54
IDH3A-217ENST00000559889 TRIM28Q13263 835 aaKnown RBP11.69□□□□□ -0.54
IDH3A-217ENST00000559889 FAM89AQ96GI7 184 aa11.69□□□□□ -0.54
IDH3A-217ENST00000559889 ATP6V0A2Q9Y487 856 aa11.69□□□□□ -0.54
IDH3A-217ENST00000559889 POTEIP0CG38 1075 aa11.68□□□□□ -0.54
IDH3A-217ENST00000559889 POTEJP0CG39 1038 aa11.68□□□□□ -0.54
IDH3A-217ENST00000559889 GRIPAP1Q4V328 841 aa11.68□□□□□ -0.54
IDH3A-217ENST00000559889 NCBP3Q53F19 620 aaKnown RBP11.68□□□□□ -0.54
IDH3A-217ENST00000559889 LAMB2P55268 1798 aa11.68□□□□□ -0.54
IDH3A-217ENST00000559889 CDCA7LQ96GN5 454 aa11.68□□□□□ -0.54
IDH3A-217ENST00000559889 BBOX1O75936 387 aa11.67□□□□□ -0.54
IDH3A-217ENST00000559889 IL16Q14005 1332 aa11.67□□□□□ -0.54
IDH3A-217ENST00000559889 CCDC30Q5VVM6 783 aa11.67□□□□□ -0.54
IDH3A-217ENST00000559889 RIC3Q7Z5B4 369 aa11.67□□□□□ -0.54
IDH3A-217ENST00000559889 DDX60Q8IY21 1712 aaKnown RBP11.67□□□□□ -0.54
IDH3A-217ENST00000559889 GOLGA2Q08379 1002 aa11.66□□□□□ -0.54
IDH3A-217ENST00000559889 GRAPQ13588 217 aa11.66□□□□□ -0.54
IDH3A-217ENST00000559889 GRAPLQ8TC17 118 aaPredicted RBP11.66□□□□□ -0.54
IDH3A-217ENST00000559889 RTFDC1Q9BY42 306 aaPredicted RBP11.66□□□□□ -0.54
IDH3A-217ENST00000559889 TAF1DQ9H5J8 278 aaPredicted RBP11.66□□□□□ -0.54
IDH3A-217ENST00000559889 IQCA1LA6NCM1 817 aa11.66□□□□□ -0.54
IDH3A-217ENST00000559889 SF3B3Q15393 1217 aaKnown RBP11.66□□□□□ -0.54
IDH3A-217ENST00000559889 RTL5Q5HYW3 569 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms