RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 SYNE4Q8N205 404 aa19.15■□□□□ 0.66
RABGGTA-211ENST00000559850 ZNF526Q8TF50 670 aaPredicted RBP19.15■□□□□ 0.66
RABGGTA-211ENST00000559850 MASTLQ96GX5 879 aa19.15■□□□□ 0.66
RABGGTA-211ENST00000559850 PDZRN3Q9UPQ7 1066 aa19.15■□□□□ 0.66
RABGGTA-211ENST00000559850 IBTKQ9P2D0 1353 aaPredicted RBP19.15■□□□□ 0.66
RABGGTA-211ENST00000559850 DDX60Q8IY21 1712 aaKnown RBP19.14■□□□□ 0.66
RABGGTA-211ENST00000559850 HSP90AB3PQ58FF7 597 aa19.14■□□□□ 0.65
RABGGTA-211ENST00000559850 PRPF40BQ6NWY9 871 aaKnown RBP19.14■□□□□ 0.65
RABGGTA-211ENST00000559850 PPP1R42Q7Z4L9 355 aa19.14■□□□□ 0.65
RABGGTA-211ENST00000559850 MIER1Q8N108 512 aa19.14■□□□□ 0.65
RABGGTA-211ENST00000559850 UTP14AQ9BVJ6 771 aaKnown RBP19.14■□□□□ 0.65
RABGGTA-211ENST00000559850 NPR1P16066 1061 aa19.13■□□□□ 0.65
RABGGTA-211ENST00000559850 PRELPP51888 382 aa19.13■□□□□ 0.65
RABGGTA-211ENST00000559850 C9orf131Q5VYM1 1079 aa19.13■□□□□ 0.65
RABGGTA-211ENST00000559850 RIC3Q7Z5B4 369 aa19.13■□□□□ 0.65
RABGGTA-211ENST00000559850 CNKSR1Q969H4 720 aa19.13■□□□□ 0.65
RABGGTA-211ENST00000559850 TAF1P21675 1872 aa19.12■□□□□ 0.65
RABGGTA-211ENST00000559850 TIAM2Q8IVF5 1701 aa19.12■□□□□ 0.65
RABGGTA-211ENST00000559850 KLRG2A4D1S0 409 aaPredicted RBP19.12■□□□□ 0.65
RABGGTA-211ENST00000559850 GOLGA2Q08379 1002 aa19.12■□□□□ 0.65
RABGGTA-211ENST00000559850 G2E3Q7L622 706 aa19.12■□□□□ 0.65
RABGGTA-211ENST00000559850 ZNF521Q96K83 1311 aa19.11■□□□□ 0.65
RABGGTA-211ENST00000559850 NFKBIEO00221 500 aa19.11■□□□□ 0.65
RABGGTA-211ENST00000559850 OLFM4Q6UX06 510 aa19.11■□□□□ 0.65
RABGGTA-211ENST00000559850 SLC51AQ86UW1 340 aa19.11■□□□□ 0.65
RABGGTA-211ENST00000559850 ISCA1Q9BUE6 129 aa19.11■□□□□ 0.65
RABGGTA-211ENST00000559850 RNF181Q9P0P0 153 aa19.11■□□□□ 0.65
RABGGTA-211ENST00000559850 VAMP4O75379 141 aa19.1■□□□□ 0.65
RABGGTA-211ENST00000559850 HCLS1P14317 486 aaPredicted RBP19.1■□□□□ 0.65
RABGGTA-211ENST00000559850 RTL5Q5HYW3 569 aaPredicted RBP19.1■□□□□ 0.65
RABGGTA-211ENST00000559850 MYD88Q99836 296 aa19.1■□□□□ 0.65
RABGGTA-211ENST00000559850 STK31Q9BXU1 1019 aa19.1■□□□□ 0.65
RABGGTA-211ENST00000559850 TRMT112Q9UI30 125 aaKnown RBP19.1■□□□□ 0.65
RABGGTA-211ENST00000559850 RIC1Q4ADV7 1423 aa19.09■□□□□ 0.65
RABGGTA-211ENST00000559850 SLC4A2P04920 1241 aa19.09■□□□□ 0.65
RABGGTA-211ENST00000559850 CRY2Q49AN0 593 aa19.09■□□□□ 0.65
RABGGTA-211ENST00000559850 MYH16Q9H6N6 1097 aa19.09■□□□□ 0.65
RABGGTA-211ENST00000559850 CACNA1FO60840 1977 aa19.08■□□□□ 0.65
RABGGTA-211ENST00000559850 RPGRQ92834 1020 aaKnown RBP19.08■□□□□ 0.64
RABGGTA-211ENST00000559850 DICER1Q9UPY3 1922 aaKnown RBP19.08■□□□□ 0.64
RABGGTA-211ENST00000559850 SH3TC1Q8TE82 1336 aa19.07■□□□□ 0.64
RABGGTA-211ENST00000559850 SLC10A5Q5PT55 438 aa19.07■□□□□ 0.64
RABGGTA-211ENST00000559850 JARID2Q92833 1246 aaPredicted RBP19.07■□□□□ 0.64
RABGGTA-211ENST00000559850 FAM89AQ96GI7 184 aa19.07■□□□□ 0.64
RABGGTA-211ENST00000559850 NLRP3Q96P20 1036 aa19.07■□□□□ 0.64
RABGGTA-211ENST00000559850 MAP3K2Q9Y2U5 619 aa19.07■□□□□ 0.64
RABGGTA-211ENST00000559850 C7orf43Q8WVR3 580 aa19.06■□□□□ 0.64
RABGGTA-211ENST00000559850 PI4KAP2A4QPH2 592 aa19.05■□□□□ 0.64
RABGGTA-211ENST00000559850 DDX58O95786 925 aaKnown RBP19.05■□□□□ 0.64
RABGGTA-211ENST00000559850 PI4KAP1Q8N8J0 262 aa19.05■□□□□ 0.64
RABGGTA-211ENST00000559850 CDCA7LQ96GN5 454 aa19.05■□□□□ 0.64
RABGGTA-211ENST00000559850 METTL22Q9BUU2 404 aaPredicted RBP19.05■□□□□ 0.64
RABGGTA-211ENST00000559850 CHMP4AQ9BY43 222 aa19.05■□□□□ 0.64
RABGGTA-211ENST00000559850 COL4A1P02462 1669 aa19.05■□□□□ 0.64
RABGGTA-211ENST00000559850 RNF123Q5XPI4 1314 aa19.04■□□□□ 0.64
RABGGTA-211ENST00000559850 LMNB1P20700 586 aa19.04■□□□□ 0.64
RABGGTA-211ENST00000559850 ALDH1B1P30837 517 aa19.04■□□□□ 0.64
RABGGTA-211ENST00000559850 HOXA10P31260 410 aaPredicted RBP19.04■□□□□ 0.64
RABGGTA-211ENST00000559850 KSR2Q6VAB6 950 aa19.04■□□□□ 0.64
RABGGTA-211ENST00000559850 RBM17Q96I25 401 aaKnown RBP19.04■□□□□ 0.64
RABGGTA-211ENST00000559850 GPBP1L1Q9HC44 474 aaPredicted RBP19.04■□□□□ 0.64
RABGGTA-211ENST00000559850 FLIIQ13045 1269 aa19.03■□□□□ 0.64
RABGGTA-211ENST00000559850 CCDC93Q567U6 631 aa19.03■□□□□ 0.64
RABGGTA-211ENST00000559850 TAOK3Q9H2K8 898 aa19.03■□□□□ 0.64
RABGGTA-211ENST00000559850 ABCC4O15439 1325 aa19.02■□□□□ 0.64
RABGGTA-211ENST00000559850 TRIM28Q13263 835 aaKnown RBP19.02■□□□□ 0.64
RABGGTA-211ENST00000559850 CRAMP1Q96RY5 1269 aa19.02■□□□□ 0.64
RABGGTA-211ENST00000559850 IRS4O14654 1257 aaPredicted RBP19.01■□□□□ 0.63
RABGGTA-211ENST00000559850 PPEF1O14829 653 aaPredicted RBP19.01■□□□□ 0.63
RABGGTA-211ENST00000559850 IGKV5-2P06315 115 aa19.01■□□□□ 0.63
RABGGTA-211ENST00000559850 SLFN5Q08AF3 891 aa19.01■□□□□ 0.63
RABGGTA-211ENST00000559850 FKBP5Q13451 457 aaPredicted RBP19.01■□□□□ 0.63
RABGGTA-211ENST00000559850 CWF19L2Q2TBE0 894 aaKnown RBP19.01■□□□□ 0.63
RABGGTA-211ENST00000559850 CWC25Q9NXE8 425 aaPredicted RBP19.01■□□□□ 0.63
RABGGTA-211ENST00000559850 E9PSI1 815 aa19■□□□□ 0.63
RABGGTA-211ENST00000559850 SOGA3Q5TF21 947 aa19■□□□□ 0.63
RABGGTA-211ENST00000559850 NMRK2Q9NPI5 230 aa19■□□□□ 0.63
RABGGTA-211ENST00000559850 ZNF277Q9NRM2 450 aaPredicted RBP19■□□□□ 0.63
RABGGTA-211ENST00000559850 SNED1Q8TER0 1413 aa19■□□□□ 0.63
RABGGTA-211ENST00000559850 LTBP3Q9NS15 1303 aa19■□□□□ 0.63
RABGGTA-211ENST00000559850 ZBTB38Q8NAP3 1195 aaPredicted RBP18.99■□□□□ 0.63
RABGGTA-211ENST00000559850 CCDC191Q8NCU4 936 aa18.99■□□□□ 0.63
RABGGTA-211ENST00000559850 SPEF2Q9C093 1822 aa18.99■□□□□ 0.63
RABGGTA-211ENST00000559850 MYH3P11055 1940 aa18.98■□□□□ 0.63
RABGGTA-211ENST00000559850 F6X3S4 739 aa18.98■□□□□ 0.63
RABGGTA-211ENST00000559850 FKBP4Q02790 459 aaKnown RBP eCLIP18.98■□□□□ 0.63
RABGGTA-211ENST00000559850 DDX46Q7L014 1031 aaKnown RBP18.98■□□□□ 0.63
RABGGTA-211ENST00000559850 CCDC85AQ96PX6 553 aaPredicted RBP18.98■□□□□ 0.63
RABGGTA-211ENST00000559850 NEURL1BA8MQ27 555 aa18.97■□□□□ 0.63
RABGGTA-211ENST00000559850 NEXNQ0ZGT2 675 aa18.97■□□□□ 0.63
RABGGTA-211ENST00000559850 COL4A5P29400 1685 aa18.96■□□□□ 0.63
RABGGTA-211ENST00000559850 KIF3CO14782 793 aa18.96■□□□□ 0.63
RABGGTA-211ENST00000559850 PCCAP05165 728 aaPredicted RBP18.96■□□□□ 0.63
RABGGTA-211ENST00000559850 RTKN2Q8IZC4 609 aa18.96■□□□□ 0.63
RABGGTA-211ENST00000559850 DNAAF4Q8WXU2 420 aa18.96■□□□□ 0.63
RABGGTA-211ENST00000559850 LRRC37AA6NMS7 1700 aa18.95■□□□□ 0.62
RABGGTA-211ENST00000559850 GRAPQ13588 217 aa18.95■□□□□ 0.62
RABGGTA-211ENST00000559850 SF3B3Q15393 1217 aaKnown RBP18.95■□□□□ 0.62
RABGGTA-211ENST00000559850 GRAPLQ8TC17 118 aaPredicted RBP18.95■□□□□ 0.62
RABGGTA-211ENST00000559850 CELF1Q92879 486 aaKnown RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms