RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 COL4A5P29400 1685 aa14.46□□□□□ -0.09
TRAF3-207ENST00000559734 COL3A1P02461 1466 aaPredicted RBP14.46□□□□□ -0.09
TRAF3-207ENST00000559734 HLFQ16534 295 aa14.46□□□□□ -0.09
TRAF3-207ENST00000559734 NGEFQ8N5V2 710 aa14.46□□□□□ -0.09
TRAF3-207ENST00000559734 RPGRQ92834 1020 aaKnown RBP14.46□□□□□ -0.09
TRAF3-207ENST00000559734 TLL2Q9Y6L7 1015 aa14.46□□□□□ -0.09
TRAF3-207ENST00000559734 NBPF26B4DH59 902 aa14.45□□□□□ -0.1
TRAF3-207ENST00000559734 PRKAR2BP31323 418 aa14.45□□□□□ -0.1
TRAF3-207ENST00000559734 RGS19P49795 217 aa14.45□□□□□ -0.1
TRAF3-207ENST00000559734 CST9Q5W186 159 aa14.45□□□□□ -0.1
TRAF3-207ENST00000559734 NBPF10Q6P3W6 841 aaKnown RBP14.45□□□□□ -0.1
TRAF3-207ENST00000559734 USP50Q70EL3 339 aaPredicted RBP14.45□□□□□ -0.1
TRAF3-207ENST00000559734 NIM1KQ8IY84 436 aa14.45□□□□□ -0.1
TRAF3-207ENST00000559734 NBPF15Q8N660 670 aa14.45□□□□□ -0.1
TRAF3-207ENST00000559734 RTF1Q92541 710 aaKnown RBP14.45□□□□□ -0.1
TRAF3-207ENST00000559734 PHACTR3Q96KR7 559 aa14.45□□□□□ -0.1
TRAF3-207ENST00000559734 MCOLN1Q9GZU1 580 aa14.45□□□□□ -0.1
TRAF3-207ENST00000559734 SNED1Q8TER0 1413 aa14.44□□□□□ -0.1
TRAF3-207ENST00000559734 CELF2O95319 508 aaKnown RBP14.44□□□□□ -0.1
TRAF3-207ENST00000559734 CC2D2BQ6DHV5 1058 aa14.44□□□□□ -0.1
TRAF3-207ENST00000559734 MCM10Q7L590 875 aa14.44□□□□□ -0.1
TRAF3-207ENST00000559734 SLC51AQ86UW1 340 aa14.44□□□□□ -0.1
TRAF3-207ENST00000559734 ZNF408Q9H9D4 720 aa14.44□□□□□ -0.1
TRAF3-207ENST00000559734 KIF7Q2M1P5 1343 aa14.43□□□□□ -0.1
TRAF3-207ENST00000559734 MAP2K2P36507 400 aa14.43□□□□□ -0.1
TRAF3-207ENST00000559734 DGKZQ13574 1117 aa14.43□□□□□ -0.1
TRAF3-207ENST00000559734 NYXQ9GZU5 481 aa14.43□□□□□ -0.1
TRAF3-207ENST00000559734 PCDH10Q9P2E7 1040 aa14.43□□□□□ -0.1
TRAF3-207ENST00000559734 PPEF1O14829 653 aaPredicted RBP14.42□□□□□ -0.1
TRAF3-207ENST00000559734 PPIP5K2O43314 1243 aa14.42□□□□□ -0.1
TRAF3-207ENST00000559734 GPTP24298 496 aa14.42□□□□□ -0.1
TRAF3-207ENST00000559734 DCTN1Q14203 1278 aa14.42□□□□□ -0.1
TRAF3-207ENST00000559734 CRY2Q49AN0 593 aa14.42□□□□□ -0.1
TRAF3-207ENST00000559734 PPP4R3CPQ6ZMV5 832 aa14.42□□□□□ -0.1
TRAF3-207ENST00000559734 RGL2O15211 777 aa14.41□□□□□ -0.1
TRAF3-207ENST00000559734 CA12O43570 354 aa14.41□□□□□ -0.1
TRAF3-207ENST00000559734 AOC3Q16853 763 aa14.41□□□□□ -0.1
TRAF3-207ENST00000559734 SAPCD2Q86UD0 394 aa14.41□□□□□ -0.1
TRAF3-207ENST00000559734 RBM17Q96I25 401 aaKnown RBP14.41□□□□□ -0.1
TRAF3-207ENST00000559734 GLIS2Q9BZE0 524 aaPredicted RBP14.41□□□□□ -0.1
TRAF3-207ENST00000559734 RSPH6AQ9H0K4 717 aa14.41□□□□□ -0.1
TRAF3-207ENST00000559734 ADARB2Q9NS39 739 aaKnown RBP14.41□□□□□ -0.1
TRAF3-207ENST00000559734 CLSPNQ9HAW4 1339 aa14.41□□□□□ -0.1
TRAF3-207ENST00000559734 TRPM7Q96QT4 1865 aa14.4□□□□□ -0.1
TRAF3-207ENST00000559734 CIAPIN1Q6FI81 312 aa14.4□□□□□ -0.1
TRAF3-207ENST00000559734 KIF6Q6ZMV9 814 aa14.4□□□□□ -0.1
TRAF3-207ENST00000559734 TMX4Q9H1E5 349 aaPredicted RBP14.4□□□□□ -0.1
TRAF3-207ENST00000559734 GPRC5DQ9NZD1 345 aa14.4□□□□□ -0.1
TRAF3-207ENST00000559734 PER1O15534 1290 aaPredicted RBP14.39□□□□□ -0.11
TRAF3-207ENST00000559734 BRPF1P55201 1214 aaPredicted RBP14.39□□□□□ -0.11
TRAF3-207ENST00000559734 CFAP53Q96M91 514 aa14.39□□□□□ -0.11
TRAF3-207ENST00000559734 NPC1L1Q9UHC9 1359 aa14.38□□□□□ -0.11
TRAF3-207ENST00000559734 GMPSP49915 693 aaPredicted RBP14.38□□□□□ -0.11
TRAF3-207ENST00000559734 GRIPAP1Q4V328 841 aa14.38□□□□□ -0.11
TRAF3-207ENST00000559734 BCL2L13Q9BXK5 485 aa14.38□□□□□ -0.11
TRAF3-207ENST00000559734 ZBTB3Q9H5J0 574 aa14.38□□□□□ -0.11
TRAF3-207ENST00000559734 MIS18AQ9NYP9 233 aa14.38□□□□□ -0.11
TRAF3-207ENST00000559734 RRP7AQ9Y3A4 280 aaKnown RBP14.38□□□□□ -0.11
TRAF3-207ENST00000559734 MAP3K15Q6ZN16 1313 aa14.38□□□□□ -0.11
TRAF3-207ENST00000559734 U2AF1L5P0DN76 240 aaPredicted RBP14.37□□□□□ -0.11
TRAF3-207ENST00000559734 MYL6BP14649 208 aa14.37□□□□□ -0.11
TRAF3-207ENST00000559734 HOXA10P31260 410 aaPredicted RBP14.37□□□□□ -0.11
TRAF3-207ENST00000559734 U2AF1Q01081 240 aaKnown RBP eCLIP14.37□□□□□ -0.11
TRAF3-207ENST00000559734 SUSD4Q5VX71 490 aa14.37□□□□□ -0.11
TRAF3-207ENST00000559734 TTLL7Q6ZT98 887 aa14.37□□□□□ -0.11
TRAF3-207ENST00000559734 CRAMP1Q96RY5 1269 aa14.37□□□□□ -0.11
TRAF3-207ENST00000559734 RIC1Q4ADV7 1423 aa14.37□□□□□ -0.11
TRAF3-207ENST00000559734 UBN2Q6ZU65 1347 aa14.37□□□□□ -0.11
TRAF3-207ENST00000559734 ERVV-1B6SEH8 477 aa14.36□□□□□ -0.11
TRAF3-207ENST00000559734 CXCL9Q07325 125 aa14.36□□□□□ -0.11
TRAF3-207ENST00000559734 C3orf67Q6ZVT6 689 aa14.36□□□□□ -0.11
TRAF3-207ENST00000559734 ZNRF3Q9ULT6 936 aa14.36□□□□□ -0.11
TRAF3-207ENST00000559734 NUDCQ9Y266 331 aa14.36□□□□□ -0.11
TRAF3-207ENST00000559734 LAMB4A4D0S4 1761 aa14.35□□□□□ -0.11
TRAF3-207ENST00000559734 CASP8AP2Q9UKL3 1982 aa14.35□□□□□ -0.11
TRAF3-207ENST00000559734 RAD17O75943 681 aa14.35□□□□□ -0.11
TRAF3-207ENST00000559734 SOX10P56693 466 aa14.35□□□□□ -0.11
TRAF3-207ENST00000559734 TAF7Q15545 349 aaPredicted RBP14.35□□□□□ -0.11
TRAF3-207ENST00000559734 HHIPL1Q96JK4 782 aa14.35□□□□□ -0.11
TRAF3-207ENST00000559734 ZIC5Q96T25 663 aa14.35□□□□□ -0.11
TRAF3-207ENST00000559734 IBTKQ9P2D0 1353 aaPredicted RBP14.34□□□□□ -0.11
TRAF3-207ENST00000559734 HUNKP57058 714 aa14.34□□□□□ -0.11
TRAF3-207ENST00000559734 NOGQ13253 232 aa14.34□□□□□ -0.11
TRAF3-207ENST00000559734 CDC37L1Q7L3B6 337 aa14.34□□□□□ -0.11
TRAF3-207ENST00000559734 SUPT20HQ8NEM7 779 aa14.34□□□□□ -0.11
TRAF3-207ENST00000559734 TRPM4Q8TD43 1214 aa14.34□□□□□ -0.11
TRAF3-207ENST00000559734 ATP6V0A2Q9Y487 856 aa14.34□□□□□ -0.11
TRAF3-207ENST00000559734 SHTN1A0MZ66 631 aa14.33□□□□□ -0.12
TRAF3-207ENST00000559734 NTSR2O95665 410 aa14.33□□□□□ -0.12
TRAF3-207ENST00000559734 DPP8Q6V1X1 898 aaPredicted RBP14.33□□□□□ -0.12
TRAF3-207ENST00000559734 NLRP3Q96P20 1036 aa14.33□□□□□ -0.12
TRAF3-207ENST00000559734 HIRAP54198 1017 aaPredicted RBP14.32□□□□□ -0.12
TRAF3-207ENST00000559734 DLK2Q6UY11 383 aa14.32□□□□□ -0.12
TRAF3-207ENST00000559734 PPP1R42Q7Z4L9 355 aa14.32□□□□□ -0.12
TRAF3-207ENST00000559734 USP48Q86UV5 1035 aa14.32□□□□□ -0.12
TRAF3-207ENST00000559734 ABCC4O15439 1325 aa14.32□□□□□ -0.12
TRAF3-207ENST00000559734 NUP98P52948 1817 aa14.31□□□□□ -0.12
TRAF3-207ENST00000559734 H7C1D1 291 aa14.31□□□□□ -0.12
TRAF3-207ENST00000559734 HTATSF1O43719 755 aaKnown RBP14.31□□□□□ -0.12
TRAF3-207ENST00000559734 TNIP1Q15025 636 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms