RNA–Protein interactions for RNA: ENST00000559642.1

BMP4-208, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-208ENST00000559642 C3orf67Q6ZVT6 689 aa16.66■□□□□ 0.26
BMP4-208ENST00000559642 PPP1R42Q7Z4L9 355 aa16.66■□□□□ 0.26
BMP4-208ENST00000559642 NLRP10Q86W26 655 aa16.66■□□□□ 0.26
BMP4-208ENST00000559642 PLBD2Q8NHP8 589 aa16.66■□□□□ 0.26
BMP4-208ENST00000559642 SPINK5Q9NQ38 1064 aaPredicted RBP16.66■□□□□ 0.26
BMP4-208ENST00000559642 RNF181Q9P0P0 153 aa16.66■□□□□ 0.26
BMP4-208ENST00000559642 DDX60Q8IY21 1712 aaKnown RBP16.65■□□□□ 0.26
BMP4-208ENST00000559642 NFKBIEO00221 500 aa16.65■□□□□ 0.26
BMP4-208ENST00000559642 PRELPP51888 382 aa16.65■□□□□ 0.26
BMP4-208ENST00000559642 TWISTNBQ3B726 338 aaPredicted RBP16.65■□□□□ 0.26
BMP4-208ENST00000559642 ANKRD13DQ6ZTN6 518 aa16.65■□□□□ 0.26
BMP4-208ENST00000559642 WDR63Q8IWG1 891 aa16.65■□□□□ 0.26
BMP4-208ENST00000559642 UTP14AQ9BVJ6 771 aaKnown RBP16.65■□□□□ 0.26
BMP4-208ENST00000559642 CRY2Q49AN0 593 aa16.64■□□□□ 0.25
BMP4-208ENST00000559642 CCDC30Q5VVM6 783 aa16.64■□□□□ 0.25
BMP4-208ENST00000559642 ATP5J2-PTCD1G3V325 749 aa16.63■□□□□ 0.25
BMP4-208ENST00000559642 GOLGA2Q08379 1002 aa16.63■□□□□ 0.25
BMP4-208ENST00000559642 SYNE4Q8N205 404 aa16.63■□□□□ 0.25
BMP4-208ENST00000559642 OLFM4Q6UX06 510 aa16.62■□□□□ 0.25
BMP4-208ENST00000559642 RIC3Q7Z5B4 369 aa16.62■□□□□ 0.25
BMP4-208ENST00000559642 ISCA1Q9BUE6 129 aa16.62■□□□□ 0.25
BMP4-208ENST00000559642 GPBP1L1Q9HC44 474 aaPredicted RBP16.62■□□□□ 0.25
BMP4-208ENST00000559642 TRMT112Q9UI30 125 aaKnown RBP16.62■□□□□ 0.25
BMP4-208ENST00000559642 DICER1Q9UPY3 1922 aaKnown RBP16.61■□□□□ 0.25
BMP4-208ENST00000559642 HCLS1P14317 486 aaPredicted RBP16.61■□□□□ 0.25
BMP4-208ENST00000559642 EXOSC9Q06265 439 aaKnown RBP16.61■□□□□ 0.25
BMP4-208ENST00000559642 SLC51AQ86UW1 340 aa16.61■□□□□ 0.25
BMP4-208ENST00000559642 RPGRQ92834 1020 aaKnown RBP16.61■□□□□ 0.25
BMP4-208ENST00000559642 STK31Q9BXU1 1019 aa16.61■□□□□ 0.25
BMP4-208ENST00000559642 ZNF521Q96K83 1311 aa16.61■□□□□ 0.25
BMP4-208ENST00000559642 CCER2I3L3R5 266 aa16.6■□□□□ 0.25
BMP4-208ENST00000559642 LMNB1P20700 586 aa16.6■□□□□ 0.25
BMP4-208ENST00000559642 C7orf43Q8WVR3 580 aa16.6■□□□□ 0.25
BMP4-208ENST00000559642 MYD88Q99836 296 aa16.6■□□□□ 0.25
BMP4-208ENST00000559642 RNF123Q5XPI4 1314 aa16.6■□□□□ 0.25
BMP4-208ENST00000559642 SH3TC1Q8TE82 1336 aa16.6■□□□□ 0.25
BMP4-208ENST00000559642 TAF1P21675 1872 aa16.59■□□□□ 0.25
BMP4-208ENST00000559642 CCDC93Q567U6 631 aa16.59■□□□□ 0.25
BMP4-208ENST00000559642 SLC10A5Q5PT55 438 aa16.59■□□□□ 0.25
BMP4-208ENST00000559642 G2E3Q7L622 706 aa16.59■□□□□ 0.25
BMP4-208ENST00000559642 TAOK3Q9H2K8 898 aa16.59■□□□□ 0.25
BMP4-208ENST00000559642 ALDH1B1P30837 517 aa16.58■□□□□ 0.24
BMP4-208ENST00000559642 HOXA10P31260 410 aaPredicted RBP16.58■□□□□ 0.24
BMP4-208ENST00000559642 RTL5Q5HYW3 569 aaPredicted RBP16.58■□□□□ 0.24
BMP4-208ENST00000559642 SOGA3Q5TF21 947 aa16.58■□□□□ 0.24
BMP4-208ENST00000559642 FAM89AQ96GI7 184 aa16.58■□□□□ 0.24
BMP4-208ENST00000559642 NLRP3Q96P20 1036 aa16.58■□□□□ 0.24
BMP4-208ENST00000559642 CHMP4AQ9BY43 222 aa16.58■□□□□ 0.24
BMP4-208ENST00000559642 MYH16Q9H6N6 1097 aa16.58■□□□□ 0.24
BMP4-208ENST00000559642 SNED1Q8TER0 1413 aa16.58■□□□□ 0.24
BMP4-208ENST00000559642 CACNA1FO60840 1977 aa16.57■□□□□ 0.24
BMP4-208ENST00000559642 LTBP3Q9NS15 1303 aa16.57■□□□□ 0.24
BMP4-208ENST00000559642 VAMP4O75379 141 aa16.57■□□□□ 0.24
BMP4-208ENST00000559642 DDX58O95786 925 aaKnown RBP16.57■□□□□ 0.24
BMP4-208ENST00000559642 RBM17Q96I25 401 aaKnown RBP16.57■□□□□ 0.24
BMP4-208ENST00000559642 MAP3K2Q9Y2U5 619 aa16.57■□□□□ 0.24
BMP4-208ENST00000559642 COL4A1P02462 1669 aa16.56■□□□□ 0.24
BMP4-208ENST00000559642 ABCC4O15439 1325 aa16.56■□□□□ 0.24
BMP4-208ENST00000559642 PPEF1O14829 653 aaPredicted RBP16.56■□□□□ 0.24
BMP4-208ENST00000559642 SLC4A2P04920 1241 aa16.56■□□□□ 0.24
BMP4-208ENST00000559642 DIEXFQ68CQ4 756 aaKnown RBP16.56■□□□□ 0.24
BMP4-208ENST00000559642 CRAMP1Q96RY5 1269 aa16.56■□□□□ 0.24
BMP4-208ENST00000559642 METTL22Q9BUU2 404 aaPredicted RBP16.56■□□□□ 0.24
BMP4-208ENST00000559642 NMRK2Q9NPI5 230 aa16.56■□□□□ 0.24
BMP4-208ENST00000559642 PI4KAP2A4QPH2 592 aa16.55■□□□□ 0.24
BMP4-208ENST00000559642 KIF3CO14782 793 aa16.55■□□□□ 0.24
BMP4-208ENST00000559642 TRIM28Q13263 835 aaKnown RBP16.55■□□□□ 0.24
BMP4-208ENST00000559642 KSR2Q6VAB6 950 aa16.55■□□□□ 0.24
BMP4-208ENST00000559642 PI4KAP1Q8N8J0 262 aa16.55■□□□□ 0.24
BMP4-208ENST00000559642 ZC3H4Q9UPT8 1303 aaKnown RBP16.54■□□□□ 0.24
BMP4-208ENST00000559642 C1QTNF8P60827 252 aa16.54■□□□□ 0.24
BMP4-208ENST00000559642 FKBP4Q02790 459 aaKnown RBP eCLIP16.54■□□□□ 0.243e-6■■■□□ 17.6
BMP4-208ENST00000559642 FLIIQ13045 1269 aa16.54■□□□□ 0.24
BMP4-208ENST00000559642 MIER1Q8N108 512 aa16.54■□□□□ 0.24
BMP4-208ENST00000559642 JARID2Q92833 1246 aaPredicted RBP16.54■□□□□ 0.24
BMP4-208ENST00000559642 ZNF277Q9NRM2 450 aaPredicted RBP16.54■□□□□ 0.24
BMP4-208ENST00000559642 CWC25Q9NXE8 425 aaPredicted RBP16.53■□□□□ 0.24
BMP4-208ENST00000559642 LRRC37AA6NMS7 1700 aa16.53■□□□□ 0.24
BMP4-208ENST00000559642 KDM2BQ8NHM5 1336 aa16.52■□□□□ 0.24
BMP4-208ENST00000559642 IRS4O14654 1257 aaPredicted RBP16.52■□□□□ 0.24
BMP4-208ENST00000559642 IGKV5-2P06315 115 aa16.52■□□□□ 0.24
BMP4-208ENST00000559642 FKBP5Q13451 457 aaPredicted RBP16.52■□□□□ 0.24
BMP4-208ENST00000559642 RTKN2Q8IZC4 609 aa16.52■□□□□ 0.24
BMP4-208ENST00000559642 ZBTB38Q8NAP3 1195 aaPredicted RBP16.52■□□□□ 0.24
BMP4-208ENST00000559642 CCDC191Q8NCU4 936 aa16.52■□□□□ 0.24
BMP4-208ENST00000559642 COL4A5P29400 1685 aa16.52■□□□□ 0.23
BMP4-208ENST00000559642 CWF19L2Q2TBE0 894 aaKnown RBP16.51■□□□□ 0.23
BMP4-208ENST00000559642 DDX46Q7L014 1031 aaKnown RBP16.51■□□□□ 0.23
BMP4-208ENST00000559642 MYH3P11055 1940 aa16.51■□□□□ 0.23
BMP4-208ENST00000559642 E9PSI1 815 aa16.5■□□□□ 0.23
BMP4-208ENST00000559642 PCCAP05165 728 aaPredicted RBP16.5■□□□□ 0.23
BMP4-208ENST00000559642 GRAPQ13588 217 aa16.5■□□□□ 0.23
BMP4-208ENST00000559642 GRAPLQ8TC17 118 aaPredicted RBP16.5■□□□□ 0.23
BMP4-208ENST00000559642 CDCA7LQ96GN5 454 aa16.5■□□□□ 0.23
BMP4-208ENST00000559642 ATP6V0A2Q9Y487 856 aa16.5■□□□□ 0.23
BMP4-208ENST00000559642 WDR90Q96KV7 1748 aa16.5■□□□□ 0.23
BMP4-208ENST00000559642 GLTPD2A6NH11 291 aa16.49■□□□□ 0.23
BMP4-208ENST00000559642 NEURL1BA8MQ27 555 aa16.49■□□□□ 0.23
BMP4-208ENST00000559642 IARSP41252 1262 aaKnown RBP16.49■□□□□ 0.23
BMP4-208ENST00000559642 NEXNQ0ZGT2 675 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms