RNA–Protein interactions for RNA: ENST00000559457.1

AC055874.1-202, humanhuman

TSL 3

Gene AC055874.1, Length 462 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055874.1-202ENST00000559457 CHRNA5P30532 468 aa23.84■■□□□ 1.41
AC055874.1-202ENST00000559457 DNAAF4Q8WXU2 420 aa23.84■■□□□ 1.41
AC055874.1-202ENST00000559457 BRIP1Q9BX63 1249 aa23.84■■□□□ 1.41
AC055874.1-202ENST00000559457 WWC3Q9ULE0 1092 aa23.84■■□□□ 1.41
AC055874.1-202ENST00000559457 TRIM28Q13263 835 aaKnown RBP23.83■■□□□ 1.41
AC055874.1-202ENST00000559457 TRMT112Q9UI30 125 aaKnown RBP23.83■■□□□ 1.41
AC055874.1-202ENST00000559457 COL11A2P13942 1736 aaPredicted RBP23.83■■□□□ 1.41
AC055874.1-202ENST00000559457 BRCA1P38398 1863 aaKnown RBP23.83■■□□□ 1.4
AC055874.1-202ENST00000559457 TNRC6CQ9HCJ0 1690 aaKnown RBP23.83■■□□□ 1.4
AC055874.1-202ENST00000559457 IGKV5-2P06315 115 aa23.82■■□□□ 1.4
AC055874.1-202ENST00000559457 SYNE4Q8N205 404 aa23.82■■□□□ 1.4
AC055874.1-202ENST00000559457 DLEC1Q9Y238 1755 aa23.82■■□□□ 1.4
AC055874.1-202ENST00000559457 NEXNQ0ZGT2 675 aa23.81■■□□□ 1.4
AC055874.1-202ENST00000559457 C2CD5Q86YS7 1000 aa23.81■■□□□ 1.4
AC055874.1-202ENST00000559457 KCNA3P22001 575 aa23.8■■□□□ 1.4
AC055874.1-202ENST00000559457 PDE6BP35913 854 aa23.8■■□□□ 1.4
AC055874.1-202ENST00000559457 CWF19L2Q2TBE0 894 aaKnown RBP23.8■■□□□ 1.4
AC055874.1-202ENST00000559457 PELP1Q8IZL8 1130 aaKnown RBP23.8■■□□□ 1.4
AC055874.1-202ENST00000559457 CWC25Q9NXE8 425 aaPredicted RBP23.8■■□□□ 1.4
AC055874.1-202ENST00000559457 PTPRCP08575 1304 aa23.8■■□□□ 1.4
AC055874.1-202ENST00000559457 LAMB2P55268 1798 aa23.79■■□□□ 1.4
AC055874.1-202ENST00000559457 BCAR3O75815 825 aa23.79■■□□□ 1.4
AC055874.1-202ENST00000559457 RTL5Q5HYW3 569 aaPredicted RBP23.79■■□□□ 1.4
AC055874.1-202ENST00000559457 CCDC191Q8NCU4 936 aa23.79■■□□□ 1.4
AC055874.1-202ENST00000559457 NOB1Q9ULX3 412 aaKnown RBP23.79■■□□□ 1.4
AC055874.1-202ENST00000559457 SH3TC1Q8TE82 1336 aa23.79■■□□□ 1.4
AC055874.1-202ENST00000559457 DDX60Q8IY21 1712 aaKnown RBP23.79■■□□□ 1.4
AC055874.1-202ENST00000559457 NEURL1BA8MQ27 555 aa23.78■■□□□ 1.4
AC055874.1-202ENST00000559457 H0YIN7 160 aa23.78■■□□□ 1.4
AC055874.1-202ENST00000559457 SLC4A10Q6U841 1118 aa23.78■■□□□ 1.4
AC055874.1-202ENST00000559457 JARID2Q92833 1246 aaPredicted RBP23.78■■□□□ 1.4
AC055874.1-202ENST00000559457 FAM89AQ96GI7 184 aa23.78■■□□□ 1.4
AC055874.1-202ENST00000559457 CACNA1SQ13698 1873 aa23.78■■□□□ 1.4
AC055874.1-202ENST00000559457 HCLS1P14317 486 aaPredicted RBP23.77■■□□□ 1.4
AC055874.1-202ENST00000559457 BRPF1P55201 1214 aaPredicted RBP23.77■■□□□ 1.4
AC055874.1-202ENST00000559457 RNF123Q5XPI4 1314 aa23.77■■□□□ 1.4
AC055874.1-202ENST00000559457 SLC10A5Q5PT55 438 aa23.76■■□□□ 1.39
AC055874.1-202ENST00000559457 BEND3Q5T5X7 828 aa23.76■■□□□ 1.39
AC055874.1-202ENST00000559457 C3orf67Q6ZVT6 689 aa23.76■■□□□ 1.39
AC055874.1-202ENST00000559457 LINS1Q8NG48 757 aa23.76■■□□□ 1.39
AC055874.1-202ENST00000559457 RIC1Q4ADV7 1423 aa23.76■■□□□ 1.39
AC055874.1-202ENST00000559457 GPR162Q16538 588 aa23.75■■□□□ 1.39
AC055874.1-202ENST00000559457 ZBTB38Q8NAP3 1195 aaPredicted RBP23.75■■□□□ 1.39
AC055874.1-202ENST00000559457 ZNF622Q969S3 477 aaKnown RBP eCLIP23.75■■□□□ 1.39
AC055874.1-202ENST00000559457 PIM2Q9P1W9 311 aa23.75■■□□□ 1.39
AC055874.1-202ENST00000559457 KLRG2A4D1S0 409 aaPredicted RBP23.74■■□□□ 1.39
AC055874.1-202ENST00000559457 PCCAP05165 728 aaPredicted RBP23.74■■□□□ 1.39
AC055874.1-202ENST00000559457 YBX3P16989 372 aaKnown RBP eCLIP23.74■■□□□ 1.39
AC055874.1-202ENST00000559457 PDZRN3Q9UPQ7 1066 aa23.74■■□□□ 1.39
AC055874.1-202ENST00000559457 SRGNP10124 158 aa23.73■■□□□ 1.39
AC055874.1-202ENST00000559457 GCKRQ14397 625 aa23.73■■□□□ 1.39
AC055874.1-202ENST00000559457 KIF16BQ96L93 1317 aa23.73■■□□□ 1.39
AC055874.1-202ENST00000559457 IRS4O14654 1257 aaPredicted RBP23.72■■□□□ 1.39
AC055874.1-202ENST00000559457 FRAT1Q92837 279 aaPredicted RBP23.72■■□□□ 1.39
AC055874.1-202ENST00000559457 MASTLQ96GX5 879 aa23.72■■□□□ 1.39
AC055874.1-202ENST00000559457 NLRP3Q96P20 1036 aa23.72■■□□□ 1.39
AC055874.1-202ENST00000559457 BCS1LQ9Y276 419 aa23.72■■□□□ 1.39
AC055874.1-202ENST00000559457 ARFGEF1Q9Y6D6 1849 aa23.72■■□□□ 1.39
AC055874.1-202ENST00000559457 SLX4Q8IY92 1834 aa23.71■■□□□ 1.39
AC055874.1-202ENST00000559457 API5Q9BZZ5 524 aaKnown RBP23.71■■□□□ 1.39
AC055874.1-202ENST00000559457 SRCIN1Q9C0H9 1055 aa23.71■■□□□ 1.39
AC055874.1-202ENST00000559457 DCAF8L1A6NGE4 600 aa23.7■■□□□ 1.38
AC055874.1-202ENST00000559457 NPR1P16066 1061 aa23.7■■□□□ 1.38
AC055874.1-202ENST00000559457 CRY2Q49AN0 593 aa23.7■■□□□ 1.38
AC055874.1-202ENST00000559457 DALRD3Q5D0E6 543 aaKnown RBP23.7■■□□□ 1.38
AC055874.1-202ENST00000559457 STYK1Q6J9G0 422 aa23.7■■□□□ 1.38
AC055874.1-202ENST00000559457 UBE3BQ7Z3V4 1068 aa23.7■■□□□ 1.38
AC055874.1-202ENST00000559457 MYH3P11055 1940 aa23.7■■□□□ 1.38
AC055874.1-202ENST00000559457 TAF1P21675 1872 aa23.7■■□□□ 1.38
AC055874.1-202ENST00000559457 H7C1W4 665 aa23.69■■□□□ 1.38
AC055874.1-202ENST00000559457 ALDH1L1O75891 902 aa23.69■■□□□ 1.38
AC055874.1-202ENST00000559457 TTLL6Q8N841 843 aa23.69■■□□□ 1.38
AC055874.1-202ENST00000559457 RPGRQ92834 1020 aaKnown RBP23.69■■□□□ 1.38
AC055874.1-202ENST00000559457 TNNQ9UQP3 1299 aa23.69■■□□□ 1.38
AC055874.1-202ENST00000559457 ARHGAP45Q92619 1136 aa23.68■■□□□ 1.38
AC055874.1-202ENST00000559457 CDHR2Q9BYE9 1310 aa23.67■■□□□ 1.38
AC055874.1-202ENST00000559457 IPO8O15397 1037 aaKnown RBP23.67■■□□□ 1.38
AC055874.1-202ENST00000559457 CNKSR1Q969H4 720 aa23.67■■□□□ 1.38
AC055874.1-202ENST00000559457 RCAN3Q9UKA8 241 aa23.67■■□□□ 1.38
AC055874.1-202ENST00000559457 CASP7P55210 303 aa23.66■■□□□ 1.38
AC055874.1-202ENST00000559457 ZNF219Q9P2Y4 722 aaPredicted RBP23.66■■□□□ 1.38
AC055874.1-202ENST00000559457 PDE8AO60658 829 aa23.65■■□□□ 1.38
AC055874.1-202ENST00000559457 TRIM27P14373 513 aa23.65■■□□□ 1.38
AC055874.1-202ENST00000559457 ZKSCAN2Q63HK3 967 aa23.65■■□□□ 1.38
AC055874.1-202ENST00000559457 PRPF40BQ6NWY9 871 aaKnown RBP23.65■■□□□ 1.38
AC055874.1-202ENST00000559457 ATF7IPQ6VMQ6 1270 aa23.65■■□□□ 1.38
AC055874.1-202ENST00000559457 RBM17Q96I25 401 aaKnown RBP23.65■■□□□ 1.38
AC055874.1-202ENST00000559457 C9orf78Q9NZ63 289 aaPredicted RBP23.65■■□□□ 1.38
AC055874.1-202ENST00000559457 GRM8O00222 908 aa23.64■■□□□ 1.37
AC055874.1-202ENST00000559457 HSP90B1P14625 803 aaKnown RBP23.64■■□□□ 1.37
AC055874.1-202ENST00000559457 HOXA10P31260 410 aaPredicted RBP23.64■■□□□ 1.37
AC055874.1-202ENST00000559457 CLUAP1Q96AJ1 413 aa23.64■■□□□ 1.37
AC055874.1-202ENST00000559457 GOLGB1Q14789 3259 aaKnown RBP23.64■■□□□ 1.37
AC055874.1-202ENST00000559457 ABCC4O15439 1325 aa23.63■■□□□ 1.37
AC055874.1-202ENST00000559457 CCT4P50991 539 aaKnown RBP23.63■■□□□ 1.37
AC055874.1-202ENST00000559457 SF3B3Q15393 1217 aaKnown RBP23.63■■□□□ 1.37
AC055874.1-202ENST00000559457 GRIN3BO60391 1043 aa23.62■■□□□ 1.37
AC055874.1-202ENST00000559457 ALDH1B1P30837 517 aa23.62■■□□□ 1.37
AC055874.1-202ENST00000559457 CCDC85AQ96PX6 553 aaPredicted RBP23.62■■□□□ 1.37
AC055874.1-202ENST00000559457 CRAMP1Q96RY5 1269 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms