RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 LMNB1P20700 586 aa10.56□□□□□ -0.72
SNX1-207ENST00000559401 TCIRG1Q13488 830 aa10.56□□□□□ -0.72
SNX1-207ENST00000559401 SOGA3Q5TF21 947 aa10.56□□□□□ -0.72
SNX1-207ENST00000559401 CCDC30Q5VVM6 783 aa10.56□□□□□ -0.72
SNX1-207ENST00000559401 ANKRD13DQ6ZTN6 518 aa10.56□□□□□ -0.72
SNX1-207ENST00000559401 RIC3Q7Z5B4 369 aa10.56□□□□□ -0.72
SNX1-207ENST00000559401 TSPYL6Q8N831 410 aa10.56□□□□□ -0.72
SNX1-207ENST00000559401 PLBD2Q8NHP8 589 aa10.56□□□□□ -0.72
SNX1-207ENST00000559401 STK31Q9BXU1 1019 aa10.56□□□□□ -0.72
SNX1-207ENST00000559401 PHAXQ9H814 394 aaKnown RBP10.56□□□□□ -0.72
SNX1-207ENST00000559401 TRMT112Q9UI30 125 aaKnown RBP10.56□□□□□ -0.72
SNX1-207ENST00000559401 RIC1Q4ADV7 1423 aa10.56□□□□□ -0.72
SNX1-207ENST00000559401 IL16Q14005 1332 aa10.56□□□□□ -0.72
SNX1-207ENST00000559401 ATP5J2-PTCD1G3V325 749 aa10.55□□□□□ -0.72
SNX1-207ENST00000559401 ALDH1B1P30837 517 aa10.55□□□□□ -0.72
SNX1-207ENST00000559401 TWISTNBQ3B726 338 aaPredicted RBP10.55□□□□□ -0.72
SNX1-207ENST00000559401 CCDC93Q567U6 631 aa10.55□□□□□ -0.72
SNX1-207ENST00000559401 NLRP10Q86W26 655 aa10.55□□□□□ -0.72
SNX1-207ENST00000559401 NLRP3Q96P20 1036 aa10.55□□□□□ -0.72
SNX1-207ENST00000559401 TAOK3Q9H2K8 898 aa10.55□□□□□ -0.72
SNX1-207ENST00000559401 SH3TC1Q8TE82 1336 aa10.55□□□□□ -0.72
SNX1-207ENST00000559401 FANCIQ9NVI1 1328 aa10.55□□□□□ -0.72
SNX1-207ENST00000559401 DICER1Q9UPY3 1922 aaKnown RBP10.54□□□□□ -0.72
SNX1-207ENST00000559401 KLRG2A4D1S0 409 aaPredicted RBP10.54□□□□□ -0.72
SNX1-207ENST00000559401 DDX58O95786 925 aaKnown RBP10.54□□□□□ -0.72
SNX1-207ENST00000559401 C1QTNF8P60827 252 aa10.54□□□□□ -0.72
SNX1-207ENST00000559401 NCBP3Q53F19 620 aaKnown RBP10.54□□□□□ -0.72
SNX1-207ENST00000559401 WDR63Q8IWG1 891 aa10.54□□□□□ -0.72
SNX1-207ENST00000559401 RBM17Q96I25 401 aaKnown RBP10.54□□□□□ -0.72
SNX1-207ENST00000559401 RNF123Q5XPI4 1314 aa10.54□□□□□ -0.72
SNX1-207ENST00000559401 KDM2BQ8NHM5 1336 aa10.54□□□□□ -0.72
SNX1-207ENST00000559401 DDX60Q8IY21 1712 aaKnown RBP10.53□□□□□ -0.72
SNX1-207ENST00000559401 HCLS1P14317 486 aaPredicted RBP10.53□□□□□ -0.72
SNX1-207ENST00000559401 CRY2Q49AN0 593 aa10.53□□□□□ -0.72
SNX1-207ENST00000559401 RTL5Q5HYW3 569 aaPredicted RBP10.53□□□□□ -0.72
SNX1-207ENST00000559401 OLFM4Q6UX06 510 aa10.53□□□□□ -0.72
SNX1-207ENST00000559401 C3orf67Q6ZVT6 689 aa10.53□□□□□ -0.72
SNX1-207ENST00000559401 MYD88Q99836 296 aa10.53□□□□□ -0.72
SNX1-207ENST00000559401 NMRK2Q9NPI5 230 aa10.53□□□□□ -0.72
SNX1-207ENST00000559401 PPEF1O14829 653 aaPredicted RBP10.52□□□□□ -0.73
SNX1-207ENST00000559401 PRELPP51888 382 aa10.52□□□□□ -0.73
SNX1-207ENST00000559401 C16orf71Q8IYS4 520 aaPredicted RBP10.52□□□□□ -0.73
SNX1-207ENST00000559401 SYNE4Q8N205 404 aa10.52□□□□□ -0.73
SNX1-207ENST00000559401 FAM89AQ96GI7 184 aa10.52□□□□□ -0.73
SNX1-207ENST00000559401 TMX4Q9H1E5 349 aaPredicted RBP10.52□□□□□ -0.73
SNX1-207ENST00000559401 MYH16Q9H6N6 1097 aa10.52□□□□□ -0.73
SNX1-207ENST00000559401 LTBP3Q9NS15 1303 aa10.52□□□□□ -0.73
SNX1-207ENST00000559401 ZC3H4Q9UPT8 1303 aaKnown RBP10.52□□□□□ -0.73
SNX1-207ENST00000559401 TAF1P21675 1872 aa10.51□□□□□ -0.73
SNX1-207ENST00000559401 SLC4A2P04920 1241 aa10.51□□□□□ -0.73
SNX1-207ENST00000559401 HOXA10P31260 410 aaPredicted RBP10.51□□□□□ -0.73
SNX1-207ENST00000559401 FKBP4Q02790 459 aaKnown RBP eCLIP10.51□□□□□ -0.73
SNX1-207ENST00000559401 EXOSC9Q06265 439 aaKnown RBP10.51□□□□□ -0.73
SNX1-207ENST00000559401 SLC10A5Q5PT55 438 aa10.51□□□□□ -0.73
SNX1-207ENST00000559401 RTKN2Q8IZC4 609 aa10.51□□□□□ -0.73
SNX1-207ENST00000559401 C7orf43Q8WVR3 580 aa10.51□□□□□ -0.73
SNX1-207ENST00000559401 ISCA1Q9BUE6 129 aa10.51□□□□□ -0.73
SNX1-207ENST00000559401 CACNA1FO60840 1977 aa10.5□□□□□ -0.73
SNX1-207ENST00000559401 KIF3CO14782 793 aa10.5□□□□□ -0.73
SNX1-207ENST00000559401 NEXNQ0ZGT2 675 aa10.5□□□□□ -0.73
SNX1-207ENST00000559401 DPY19L2Q6NUT2 758 aa10.5□□□□□ -0.73
SNX1-207ENST00000559401 DDX46Q7L014 1031 aaKnown RBP10.5□□□□□ -0.73
SNX1-207ENST00000559401 CRAMP1Q96RY5 1269 aa10.5□□□□□ -0.73
SNX1-207ENST00000559401 RRAGCQ9HB90 399 aa10.5□□□□□ -0.73
SNX1-207ENST00000559401 ZNF277Q9NRM2 450 aaPredicted RBP10.5□□□□□ -0.73
SNX1-207ENST00000559401 MAP3K2Q9Y2U5 619 aa10.5□□□□□ -0.73
SNX1-207ENST00000559401 ABCC4O15439 1325 aa10.5□□□□□ -0.73
SNX1-207ENST00000559401 PI4KAP2A4QPH2 592 aa10.49□□□□□ -0.73
SNX1-207ENST00000559401 GLTPD2A6NH11 291 aa10.49□□□□□ -0.73
SNX1-207ENST00000559401 FKBP5Q13451 457 aaPredicted RBP10.49□□□□□ -0.73
SNX1-207ENST00000559401 CC2D2BQ6DHV5 1058 aa10.49□□□□□ -0.73
SNX1-207ENST00000559401 KSR2Q6VAB6 950 aa10.49□□□□□ -0.73
SNX1-207ENST00000559401 G2E3Q7L622 706 aa10.49□□□□□ -0.73
SNX1-207ENST00000559401 PI4KAP1Q8N8J0 262 aa10.49□□□□□ -0.73
SNX1-207ENST00000559401 METTL22Q9BUU2 404 aaPredicted RBP10.49□□□□□ -0.73
SNX1-207ENST00000559401 SPINK5Q9NQ38 1064 aaPredicted RBP10.49□□□□□ -0.73
SNX1-207ENST00000559401 CWC25Q9NXE8 425 aaPredicted RBP10.49□□□□□ -0.73
SNX1-207ENST00000559401 CCER2I3L3R5 266 aa10.48□□□□□ -0.73
SNX1-207ENST00000559401 IRS4O14654 1257 aaPredicted RBP10.48□□□□□ -0.73
SNX1-207ENST00000559401 IARSP41252 1262 aaKnown RBP10.48□□□□□ -0.73
SNX1-207ENST00000559401 FLIIQ13045 1269 aa10.48□□□□□ -0.73
SNX1-207ENST00000559401 TRIM28Q13263 835 aaKnown RBP10.48□□□□□ -0.73
SNX1-207ENST00000559401 SLC51AQ86UW1 340 aa10.48□□□□□ -0.73
SNX1-207ENST00000559401 CCDC191Q8NCU4 936 aa10.48□□□□□ -0.73
SNX1-207ENST00000559401 JARID2Q92833 1246 aaPredicted RBP10.48□□□□□ -0.73
SNX1-207ENST00000559401 VAMP4O75379 141 aa10.47□□□□□ -0.73
SNX1-207ENST00000559401 HSP90B1P14625 803 aaKnown RBP10.47□□□□□ -0.73
SNX1-207ENST00000559401 GRAPQ13588 217 aa10.47□□□□□ -0.73
SNX1-207ENST00000559401 ZBTB38Q8NAP3 1195 aaPredicted RBP10.47□□□□□ -0.73
SNX1-207ENST00000559401 GRAPLQ8TC17 118 aaPredicted RBP10.47□□□□□ -0.73
SNX1-207ENST00000559401 JDP2Q8WYK2 163 aa10.47□□□□□ -0.73
SNX1-207ENST00000559401 WDR90Q96KV7 1748 aa10.47□□□□□ -0.73
SNX1-207ENST00000559401 MYH3P11055 1940 aa10.46□□□□□ -0.73
SNX1-207ENST00000559401 BBOX1O75936 387 aa10.46□□□□□ -0.73
SNX1-207ENST00000559401 TOMM70O94826 608 aa10.46□□□□□ -0.73
SNX1-207ENST00000559401 DDNO94850 711 aaPredicted RBP10.46□□□□□ -0.73
SNX1-207ENST00000559401 PCCAP05165 728 aaPredicted RBP10.46□□□□□ -0.73
SNX1-207ENST00000559401 VEGFAP15692 232 aaPredicted RBP10.46□□□□□ -0.73
SNX1-207ENST00000559401 CWF19L2Q2TBE0 894 aaKnown RBP10.46□□□□□ -0.73
SNX1-207ENST00000559401 GRIPAP1Q4V328 841 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms