RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 GFRA3O60609 400 aa18.14■□□□□ 0.49
CASC4-208ENST00000559151 ORC1Q13415 861 aa18.14■□□□□ 0.49
CASC4-208ENST00000559151 DUSP9Q99956 384 aaKnown RBP18.14■□□□□ 0.49
CASC4-208ENST00000559151 RPLP1P05386 114 aaKnown RBP18.13■□□□□ 0.49
CASC4-208ENST00000559151 RTCBQ9Y3I0 505 aaKnown RBP18.13■□□□□ 0.49
CASC4-208ENST00000559151 RECKO95980 971 aa18.12■□□□□ 0.49
CASC4-208ENST00000559151 ATP2B2Q01814 1243 aa18.12■□□□□ 0.49
CASC4-208ENST00000559151 GJA3Q9Y6H8 435 aa18.12■□□□□ 0.49
CASC4-208ENST00000559151 NRG2O14511 850 aaPredicted RBP18.11■□□□□ 0.49
CASC4-208ENST00000559151 TRIP4Q15650 581 aaPredicted RBP18.11■□□□□ 0.49
CASC4-208ENST00000559151 CMTR1Q8N1G2 835 aaKnown RBP18.11■□□□□ 0.49
CASC4-208ENST00000559151 CRIPAKQ8N1N5 446 aa18.11■□□□□ 0.49
CASC4-208ENST00000559151 FAM161BQ96MY7 647 aa18.11■□□□□ 0.49
CASC4-208ENST00000559151 CSRNP1Q96S65 589 aa18.11■□□□□ 0.49
CASC4-208ENST00000559151 BCL11AQ9H165 835 aa18.11■□□□□ 0.49
CASC4-208ENST00000559151 CRISPLD1Q9H336 500 aa18.11■□□□□ 0.49
CASC4-208ENST00000559151 PARP2Q9UGN5 583 aa18.11■□□□□ 0.49
CASC4-208ENST00000559151 DYRK1BQ9Y463 629 aa18.11■□□□□ 0.49
CASC4-208ENST00000559151 TYRO3Q06418 890 aa18.1■□□□□ 0.49
CASC4-208ENST00000559151 GAS2L1Q99501 681 aaPredicted RBP18.1■□□□□ 0.49
CASC4-208ENST00000559151 GRNP28799 593 aaKnown RBP18.09■□□□□ 0.49
CASC4-208ENST00000559151 FGD1P98174 961 aa18.09■□□□□ 0.49
CASC4-208ENST00000559151 XPCQ01831 940 aaPredicted RBP18.09■□□□□ 0.49
CASC4-208ENST00000559151 KCNMB2Q9Y691 235 aa18.09■□□□□ 0.49
CASC4-208ENST00000559151 F11P03951 625 aa18.08■□□□□ 0.48
CASC4-208ENST00000559151 MRPL58Q14197 206 aaKnown RBP18.08■□□□□ 0.48
CASC4-208ENST00000559151 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.08■□□□□ 0.48
CASC4-208ENST00000559151 CEP63Q96MT8 703 aa18.08■□□□□ 0.48
CASC4-208ENST00000559151 TSNAXIP1Q2TAA8 658 aa18.07■□□□□ 0.48
CASC4-208ENST00000559151 PGBD3Q8N328 593 aa18.07■□□□□ 0.48
CASC4-208ENST00000559151 SENP3-EIF4A1A0A087X0R7 540 aa18.06■□□□□ 0.48
CASC4-208ENST00000559151 EIF1AYO14602 144 aaKnown RBP18.06■□□□□ 0.48
CASC4-208ENST00000559151 ST8SIA5O15466 376 aa18.06■□□□□ 0.48
CASC4-208ENST00000559151 TCF3P15923 654 aa18.06■□□□□ 0.48
CASC4-208ENST00000559151 CFHR5Q9BXR6 569 aa18.06■□□□□ 0.48
CASC4-208ENST00000559151 UBAP1LF5GYI3 381 aa18.05■□□□□ 0.48
CASC4-208ENST00000559151 ALG1LQ6GMV1 187 aa18.05■□□□□ 0.48
CASC4-208ENST00000559151 ATP13A2Q9NQ11 1180 aa18.05■□□□□ 0.48
CASC4-208ENST00000559151 FOXD3Q9UJU5 478 aaPredicted RBP18.05■□□□□ 0.48
CASC4-208ENST00000559151 SOBPA7XYQ1 873 aa18.04■□□□□ 0.48
CASC4-208ENST00000559151 MAN1A2O60476 641 aa18.04■□□□□ 0.48
CASC4-208ENST00000559151 FNDC3AQ9Y2H6 1198 aaKnown RBP18.04■□□□□ 0.48
CASC4-208ENST00000559151 NEFLP07196 543 aa18.03■□□□□ 0.48
CASC4-208ENST00000559151 ZNF438Q7Z4V0 828 aa18.03■□□□□ 0.48
CASC4-208ENST00000559151 TNFRSF21O75509 655 aa18.02■□□□□ 0.48
CASC4-208ENST00000559151 EPB42P16452 691 aa18.02■□□□□ 0.48
CASC4-208ENST00000559151 DAB2P98082 770 aa18.02■□□□□ 0.48
CASC4-208ENST00000559151 XKR5Q6UX68 686 aa18.02■□□□□ 0.48
CASC4-208ENST00000559151 TMC4Q7Z404 712 aa18.02■□□□□ 0.48
CASC4-208ENST00000559151 NLRP8Q86W28 1048 aa18.02■□□□□ 0.48
CASC4-208ENST00000559151 AAASQ9NRG9 546 aa18.02■□□□□ 0.48
CASC4-208ENST00000559151 PSMD2Q13200 908 aa18.01■□□□□ 0.47
CASC4-208ENST00000559151 BACH2Q9BYV9 841 aa18.01■□□□□ 0.47
CASC4-208ENST00000559151 MRS2Q9HD23 443 aa18.01■□□□□ 0.47
CASC4-208ENST00000559151 BRD7Q9NPI1 651 aa18.01■□□□□ 0.47
CASC4-208ENST00000559151 DACH1Q9UI36 760 aa18.01■□□□□ 0.47
CASC4-208ENST00000559151 CPNE3O75131 537 aaKnown RBP18■□□□□ 0.47
CASC4-208ENST00000559151 PDE12Q6L8Q7 609 aaKnown RBP18■□□□□ 0.47
CASC4-208ENST00000559151 ZCCHC2Q9C0B9 1178 aaKnown RBP18■□□□□ 0.47
CASC4-208ENST00000559151 DNAJC25Q9H1X3 360 aa18■□□□□ 0.47
CASC4-208ENST00000559151 TMEM63CQ9P1W3 806 aa18■□□□□ 0.47
CASC4-208ENST00000559151 SAMD5Q5TGI4 173 aa17.99■□□□□ 0.47
CASC4-208ENST00000559151 USPL1Q5W0Q7 1092 aa17.99■□□□□ 0.47
CASC4-208ENST00000559151 XYLBO75191 536 aa17.98■□□□□ 0.47
CASC4-208ENST00000559151 EFHC2Q5JST6 749 aa17.98■□□□□ 0.47
CASC4-208ENST00000559151 SNX29Q8TEQ0 813 aa17.98■□□□□ 0.47
CASC4-208ENST00000559151 FBF1Q8TES7 1133 aa17.98■□□□□ 0.47
CASC4-208ENST00000559151 ELP3Q9H9T3 547 aa17.98■□□□□ 0.47
CASC4-208ENST00000559151 SORBS3O60504 671 aa17.97■□□□□ 0.47
CASC4-208ENST00000559151 THBS1P07996 1170 aa17.97■□□□□ 0.47
CASC4-208ENST00000559151 RIPOR1Q6ZS17 1223 aa17.96■□□□□ 0.47
CASC4-208ENST00000559151 VTI1BQ9UEU0 232 aa17.96■□□□□ 0.47
CASC4-208ENST00000559151 GNA15P30679 374 aa17.95■□□□□ 0.46
CASC4-208ENST00000559151 LDLRAD1Q5T700 205 aa17.95■□□□□ 0.46
CASC4-208ENST00000559151 PTSQ03393 145 aa17.94■□□□□ 0.46
CASC4-208ENST00000559151 ZFYVE28Q9HCC9 887 aa17.94■□□□□ 0.46
CASC4-208ENST00000559151 PHACTR2O75167 634 aa17.93■□□□□ 0.46
CASC4-208ENST00000559151 SLC35F4A4IF30 521 aa17.92■□□□□ 0.46
CASC4-208ENST00000559151 EGFRP00533 1210 aa17.92■□□□□ 0.46
CASC4-208ENST00000559151 LBRQ14739 615 aaKnown RBP17.92■□□□□ 0.46
CASC4-208ENST00000559151 ATXN7O15265 892 aaPredicted RBP17.91■□□□□ 0.46
CASC4-208ENST00000559151 CCDC74AQ96AQ1 378 aa17.91■□□□□ 0.46
CASC4-208ENST00000559151 FAM157BP0CG42 384 aa17.9■□□□□ 0.46
CASC4-208ENST00000559151 SFSWAPQ12872 951 aaKnown RBP17.9■□□□□ 0.46
CASC4-208ENST00000559151 PI16Q6UXB8 463 aa17.9■□□□□ 0.46
CASC4-208ENST00000559151 KCNH4Q9UQ05 1017 aa17.9■□□□□ 0.46
CASC4-208ENST00000559151 DCDC2BA2VCK2 349 aa17.89■□□□□ 0.45
CASC4-208ENST00000559151 IRS1P35568 1242 aa17.89■□□□□ 0.45
CASC4-208ENST00000559151 KCNQ4P56696 695 aa17.89■□□□□ 0.45
CASC4-208ENST00000559151 LAPTM4AQ15012 233 aa17.89■□□□□ 0.45
CASC4-208ENST00000559151 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.89■□□□□ 0.45
CASC4-208ENST00000559151 FIGNL1Q6PIW4 674 aa17.89■□□□□ 0.45
CASC4-208ENST00000559151 NLRP13Q86W25 1043 aa17.89■□□□□ 0.45
CASC4-208ENST00000559151 C1orf127Q8N9H9 656 aa17.89■□□□□ 0.45
CASC4-208ENST00000559151 NUCKS1Q9H1E3 243 aaKnown RBP17.89■□□□□ 0.45
CASC4-208ENST00000559151 CHRDQ9H2X0 955 aa17.89■□□□□ 0.45
CASC4-208ENST00000559151 CNTN3Q9P232 1028 aa17.89■□□□□ 0.45
CASC4-208ENST00000559151 KHNYNO15037 678 aaKnown RBP17.88■□□□□ 0.45
CASC4-208ENST00000559151 POLR3DP05423 398 aaPredicted RBP17.88■□□□□ 0.45
CASC4-208ENST00000559151 ITGAEP38570 1179 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms