RNA–Protein interactions for RNA: ENST00000559099.5

HMG20A-208, Transcript of high mobility group 20A, humanhuman

TSL 5

Gene HMG20A, Length 558 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-208ENST00000559099 MTHFSP49914 203 aa10.84□□□□□ -0.67
HMG20A-208ENST00000559099 ZNF530Q6P9A1 599 aaPredicted RBP10.84□□□□□ -0.67
HMG20A-208ENST00000559099 USP48Q86UV5 1035 aa10.84□□□□□ -0.67
HMG20A-208ENST00000559099 TRPM4Q8TD43 1214 aa10.84□□□□□ -0.67
HMG20A-208ENST00000559099 ZC3H15Q8WU90 426 aaKnown RBP10.84□□□□□ -0.67
HMG20A-208ENST00000559099 UBR2Q8IWV8 1755 aa10.83□□□□□ -0.68
HMG20A-208ENST00000559099 PPM1GO15355 546 aaPredicted RBP10.83□□□□□ -0.68
HMG20A-208ENST00000559099 SLC51AQ86UW1 340 aa10.83□□□□□ -0.68
HMG20A-208ENST00000559099 GBA2Q9HCG7 927 aaPredicted RBP10.83□□□□□ -0.68
HMG20A-208ENST00000559099 MRC1P22897 1456 aa10.82□□□□□ -0.68
HMG20A-208ENST00000559099 GMPSP49915 693 aaPredicted RBP10.82□□□□□ -0.68
HMG20A-208ENST00000559099 INTS3Q68E01 1043 aaKnown RBP10.82□□□□□ -0.68
HMG20A-208ENST00000559099 SETDB2Q96T68 719 aa10.82□□□□□ -0.68
HMG20A-208ENST00000559099 EYSQ5T1H1 3165 aa10.82□□□□□ -0.68
HMG20A-208ENST00000559099 NPC1L1Q9UHC9 1359 aa10.81□□□□□ -0.68
HMG20A-208ENST00000559099 A0A087WZG4 1122 aa10.81□□□□□ -0.68
HMG20A-208ENST00000559099 GPR25O00155 361 aa10.81□□□□□ -0.68
HMG20A-208ENST00000559099 NPHP1O15259 732 aa10.81□□□□□ -0.68
HMG20A-208ENST00000559099 NOM1Q5C9Z4 860 aaKnown RBP10.81□□□□□ -0.68
HMG20A-208ENST00000559099 RASAL3Q86YV0 1011 aa10.81□□□□□ -0.68
HMG20A-208ENST00000559099 LARGE2Q8N3Y3 721 aa10.81□□□□□ -0.68
HMG20A-208ENST00000559099 PRO3102Q9H379 93 aa10.81□□□□□ -0.68
HMG20A-208ENST00000559099 TBC1D2BQ9UPU7 963 aa10.81□□□□□ -0.68
HMG20A-208ENST00000559099 SHTN1A0MZ66 631 aa10.8□□□□□ -0.68
HMG20A-208ENST00000559099 CAMTA2O94983 1202 aa10.8□□□□□ -0.68
HMG20A-208ENST00000559099 SLC39A6Q13433 755 aa10.8□□□□□ -0.68
HMG20A-208ENST00000559099 EIF4A2Q14240 407 aaKnown RBP10.8□□□□□ -0.68
HMG20A-208ENST00000559099 PLEKHO1Q53GL0 409 aaPredicted RBP10.8□□□□□ -0.68
HMG20A-208ENST00000559099 REM2Q8IYK8 340 aaPredicted RBP10.8□□□□□ -0.68
HMG20A-208ENST00000559099 C2orf69Q8N8R5 385 aa10.8□□□□□ -0.68
HMG20A-208ENST00000559099 SOX1O00570 391 aaPredicted RBP10.79□□□□□ -0.68
HMG20A-208ENST00000559099 CXCL9Q07325 125 aa10.79□□□□□ -0.68
HMG20A-208ENST00000559099 POLR2AP24928 1970 aaKnown RBP10.79□□□□□ -0.68
HMG20A-208ENST00000559099 CDHR2Q9BYE9 1310 aa10.79□□□□□ -0.68
HMG20A-208ENST00000559099 ADM5C9JUS6 153 aa10.78□□□□□ -0.68
HMG20A-208ENST00000559099 NIM1KQ8IY84 436 aa10.78□□□□□ -0.68
HMG20A-208ENST00000559099 VSIG10Q8N0Z9 540 aa10.78□□□□□ -0.68
HMG20A-208ENST00000559099 R3HDMLQ9H3Y0 253 aa10.78□□□□□ -0.68
HMG20A-208ENST00000559099 PRDM6Q9NQX0 595 aa10.78□□□□□ -0.68
HMG20A-208ENST00000559099 LAMB4A4D0S4 1761 aa10.77□□□□□ -0.68
HMG20A-208ENST00000559099 AMOTQ4VCS5 1084 aa10.77□□□□□ -0.69
HMG20A-208ENST00000559099 C1orf141Q5JVX7 400 aa10.77□□□□□ -0.69
HMG20A-208ENST00000559099 KRT26Q7Z3Y9 468 aa10.77□□□□□ -0.69
HMG20A-208ENST00000559099 NBPF5PQ86XG9 351 aaPredicted RBP10.77□□□□□ -0.69
HMG20A-208ENST00000559099 MPNDQ8N594 471 aa10.77□□□□□ -0.69
HMG20A-208ENST00000559099 SLC52A2Q9HAB3 445 aa10.77□□□□□ -0.69
HMG20A-208ENST00000559099 FKTNO75072 461 aa10.76□□□□□ -0.69
HMG20A-208ENST00000559099 ALDH1B1P30837 517 aa10.76□□□□□ -0.69
HMG20A-208ENST00000559099 ARMC5Q96C12 935 aa10.76□□□□□ -0.69
HMG20A-208ENST00000559099 LRCH3Q96II8 777 aa10.76□□□□□ -0.69
HMG20A-208ENST00000559099 TESK2Q96S53 571 aa10.76□□□□□ -0.69
HMG20A-208ENST00000559099 POLKQ9UBT6 870 aa10.76□□□□□ -0.69
HMG20A-208ENST00000559099 EGFRP00533 1210 aa10.75□□□□□ -0.69
HMG20A-208ENST00000559099 AOC3Q16853 763 aa10.75□□□□□ -0.69
HMG20A-208ENST00000559099 CC2D2BQ6DHV5 1058 aa10.75□□□□□ -0.69
HMG20A-208ENST00000559099 OTOP1Q7RTM1 612 aa10.75□□□□□ -0.69
HMG20A-208ENST00000559099 ZNRF3Q9ULT6 936 aa10.75□□□□□ -0.69
HMG20A-208ENST00000559099 ZNF330Q9Y3S2 320 aaPredicted RBP10.75□□□□□ -0.69
HMG20A-208ENST00000559099 PRUNE2Q8WUY3 3088 aa10.74□□□□□ -0.69
HMG20A-208ENST00000559099 TTC28Q96AY4 2481 aa10.74□□□□□ -0.69
HMG20A-208ENST00000559099 PPIP5K2O43314 1243 aa10.74□□□□□ -0.69
HMG20A-208ENST00000559099 STARD3NLO95772 234 aa10.74□□□□□ -0.69
HMG20A-208ENST00000559099 IL6STP40189 918 aaPredicted RBP10.74□□□□□ -0.69
HMG20A-208ENST00000559099 CRY2Q49AN0 593 aa10.74□□□□□ -0.69
HMG20A-208ENST00000559099 AEBP1Q8IUX7 1158 aa10.74□□□□□ -0.69
HMG20A-208ENST00000559099 CARD11Q9BXL7 1154 aa10.74□□□□□ -0.69
HMG20A-208ENST00000559099 CFHR5Q9BXR6 569 aa10.74□□□□□ -0.69
HMG20A-208ENST00000559099 LGR6Q9HBX8 967 aa10.74□□□□□ -0.69
HMG20A-208ENST00000559099 CNOT7Q9UIV1 285 aaKnown RBP10.74□□□□□ -0.69
HMG20A-208ENST00000559099 TRIM17Q9Y577 477 aa10.74□□□□□ -0.69
HMG20A-208ENST00000559099 TM4SF4P48230 202 aa10.73□□□□□ -0.69
HMG20A-208ENST00000559099 SAMD7Q7Z3H4 446 aa10.73□□□□□ -0.69
HMG20A-208ENST00000559099 BCL2L13Q9BXK5 485 aa10.73□□□□□ -0.69
HMG20A-208ENST00000559099 ERBB4Q15303 1308 aa10.73□□□□□ -0.69
HMG20A-208ENST00000559099 MICALL2Q8IY33 904 aa10.72□□□□□ -0.69
HMG20A-208ENST00000559099 CARD14Q9BXL6 1004 aa10.72□□□□□ -0.69
HMG20A-208ENST00000559099 ABCC12Q96J65 1359 aa10.72□□□□□ -0.69
HMG20A-208ENST00000559099 RIC1Q4ADV7 1423 aa10.72□□□□□ -0.69
HMG20A-208ENST00000559099 ZNF609O15014 1411 aa10.71□□□□□ -0.69
HMG20A-208ENST00000559099 RAD17O75943 681 aa10.71□□□□□ -0.69
HMG20A-208ENST00000559099 GRIPAP1Q4V328 841 aa10.71□□□□□ -0.69
HMG20A-208ENST00000559099 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.71□□□□□ -0.69
HMG20A-208ENST00000559099 CDCA5Q96FF9 252 aa10.71□□□□□ -0.69
HMG20A-208ENST00000559099 STXBP5LQ9Y2K9 1186 aa10.71□□□□□ -0.69
HMG20A-208ENST00000559099 PTPN22Q9Y2R2 807 aa10.71□□□□□ -0.69
HMG20A-208ENST00000559099 LAMA2P24043 3122 aaKnown RBP10.71□□□□□ -0.7
HMG20A-208ENST00000559099 H7C1D1 291 aa10.7□□□□□ -0.7
HMG20A-208ENST00000559099 A1BGP04217 495 aa10.7□□□□□ -0.7
HMG20A-208ENST00000559099 COL9A1P20849 921 aa10.7□□□□□ -0.7
HMG20A-208ENST00000559099 TBC1D10BQ4KMP7 808 aaPredicted RBP10.7□□□□□ -0.7
HMG20A-208ENST00000559099 TPTE2Q6XPS3 522 aa10.7□□□□□ -0.7
HMG20A-208ENST00000559099 DZIP3Q86Y13 1208 aaKnown RBP10.7□□□□□ -0.7
HMG20A-208ENST00000559099 ZNF333Q96JL9 665 aa10.7□□□□□ -0.7
HMG20A-208ENST00000559099 RAPGEFL1Q9UHV5 662 aa10.7□□□□□ -0.7
HMG20A-208ENST00000559099 ZBTB12Q9Y330 459 aaPredicted RBP10.7□□□□□ -0.7
HMG20A-208ENST00000559099 KDM3BQ7LBC6 1761 aa10.7□□□□□ -0.7
HMG20A-208ENST00000559099 ASTN2O75129 1339 aaPredicted RBP10.69□□□□□ -0.7
HMG20A-208ENST00000559099 HOXA10P31260 410 aaPredicted RBP10.69□□□□□ -0.7
HMG20A-208ENST00000559099 CAP1Q01518 475 aa10.69□□□□□ -0.7
HMG20A-208ENST00000559099 CLEC4GQ6UXB4 293 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms