RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 FKBP4Q02790 459 aaKnown RBP eCLIP19.67■□□□□ 0.74
SMAD6-203ENST00000558937 RPGRQ92834 1020 aaKnown RBP19.67■□□□□ 0.74
SMAD6-203ENST00000558937 SNED1Q8TER0 1413 aa19.67■□□□□ 0.74
SMAD6-203ENST00000558937 ZNF853P0CG23 659 aa19.66■□□□□ 0.74
SMAD6-203ENST00000558937 VEGFAP15692 232 aaPredicted RBP19.66■□□□□ 0.74
SMAD6-203ENST00000558937 FSTL1Q12841 308 aa19.66■□□□□ 0.74
SMAD6-203ENST00000558937 HSP90AB3PQ58FF7 597 aa19.66■□□□□ 0.74
SMAD6-203ENST00000558937 DUSP27Q5VZP5 1158 aa19.66■□□□□ 0.74
SMAD6-203ENST00000558937 C3orf67Q6ZVT6 689 aa19.66■□□□□ 0.74
SMAD6-203ENST00000558937 LAMB2P55268 1798 aa19.65■□□□□ 0.74
SMAD6-203ENST00000558937 HOXA10P31260 410 aaPredicted RBP19.65■□□□□ 0.74
SMAD6-203ENST00000558937 APLP1P51693 650 aa19.65■□□□□ 0.74
SMAD6-203ENST00000558937 DPY19L2Q6NUT2 758 aa19.65■□□□□ 0.74
SMAD6-203ENST00000558937 UTP14AQ9BVJ6 771 aaKnown RBP19.65■□□□□ 0.74
SMAD6-203ENST00000558937 IFT57Q9NWB7 429 aa19.65■□□□□ 0.74
SMAD6-203ENST00000558937 CALD1Q05682 793 aaKnown RBP19.64■□□□□ 0.73
SMAD6-203ENST00000558937 RTKN2Q8IZC4 609 aa19.64■□□□□ 0.73
SMAD6-203ENST00000558937 ZNF277Q9NRM2 450 aaPredicted RBP19.64■□□□□ 0.73
SMAD6-203ENST00000558937 RNF123Q5XPI4 1314 aa19.63■□□□□ 0.73
SMAD6-203ENST00000558937 POTECB2RU33 542 aa19.63■□□□□ 0.73
SMAD6-203ENST00000558937 GNAI1P63096 354 aa19.63■□□□□ 0.73
SMAD6-203ENST00000558937 TCIRG1Q13488 830 aa19.63■□□□□ 0.73
SMAD6-203ENST00000558937 NLRP10Q86W26 655 aa19.63■□□□□ 0.73
SMAD6-203ENST00000558937 SMC1BQ8NDV3 1235 aa19.63■□□□□ 0.73
SMAD6-203ENST00000558937 DBF4Q9UBU7 674 aaPredicted RBP19.63■□□□□ 0.73
SMAD6-203ENST00000558937 ZNF316A6NFI3 1004 aaPredicted RBP19.62■□□□□ 0.73
SMAD6-203ENST00000558937 SLC10A5Q5PT55 438 aa19.62■□□□□ 0.73
SMAD6-203ENST00000558937 RBM17Q96I25 401 aaKnown RBP19.62■□□□□ 0.73
SMAD6-203ENST00000558937 CRAMP1Q96RY5 1269 aa19.62■□□□□ 0.73
SMAD6-203ENST00000558937 DDNO94850 711 aaPredicted RBP19.61■□□□□ 0.73
SMAD6-203ENST00000558937 CC2D2BQ6DHV5 1058 aa19.61■□□□□ 0.73
SMAD6-203ENST00000558937 SLC51AQ86UW1 340 aa19.61■□□□□ 0.73
SMAD6-203ENST00000558937 SYNE4Q8N205 404 aa19.61■□□□□ 0.73
SMAD6-203ENST00000558937 PLBD2Q8NHP8 589 aa19.61■□□□□ 0.73
SMAD6-203ENST00000558937 NLRP3Q96P20 1036 aa19.61■□□□□ 0.73
SMAD6-203ENST00000558937 PPEF1O14829 653 aaPredicted RBP19.6■□□□□ 0.73
SMAD6-203ENST00000558937 IARSP41252 1262 aaKnown RBP19.6■□□□□ 0.73
SMAD6-203ENST00000558937 PSMD1Q99460 953 aa19.6■□□□□ 0.73
SMAD6-203ENST00000558937 ZNF541Q9H0D2 1346 aa19.59■□□□□ 0.73
SMAD6-203ENST00000558937 ANKRD13DQ6ZTN6 518 aa19.59■□□□□ 0.73
SMAD6-203ENST00000558937 HYPKQ9NX55 129 aa19.59■□□□□ 0.73
SMAD6-203ENST00000558937 TRMT112Q9UI30 125 aaKnown RBP19.59■□□□□ 0.73
SMAD6-203ENST00000558937 DDX60Q8IY21 1712 aaKnown RBP19.59■□□□□ 0.73
SMAD6-203ENST00000558937 ABCC4O15439 1325 aa19.58■□□□□ 0.73
SMAD6-203ENST00000558937 SH3TC1Q8TE82 1336 aa19.58■□□□□ 0.73
SMAD6-203ENST00000558937 ELL2O00472 640 aaPredicted RBP19.58■□□□□ 0.72
SMAD6-203ENST00000558937 HCLS1P14317 486 aaPredicted RBP19.58■□□□□ 0.72
SMAD6-203ENST00000558937 ISCA1Q9BUE6 129 aa19.58■□□□□ 0.72
SMAD6-203ENST00000558937 COL4A5P29400 1685 aa19.58■□□□□ 0.72
SMAD6-203ENST00000558937 SCN4AP35499 1836 aa19.58■□□□□ 0.72
SMAD6-203ENST00000558937 TCERG1O14776 1098 aaKnown RBP19.57■□□□□ 0.72
SMAD6-203ENST00000558937 C8orf58Q8NAV2 365 aa19.57■□□□□ 0.72
SMAD6-203ENST00000558937 ZNF428Q96B54 188 aa19.57■□□□□ 0.72
SMAD6-203ENST00000558937 MRS2Q9HD23 443 aa19.57■□□□□ 0.72
SMAD6-203ENST00000558937 ANP32CO43423 234 aa19.56■□□□□ 0.72
SMAD6-203ENST00000558937 HTRA3P83110 453 aa19.56■□□□□ 0.72
SMAD6-203ENST00000558937 L3MBTL3Q96JM7 780 aaPredicted RBP19.56■□□□□ 0.72
SMAD6-203ENST00000558937 ATP5J2-PTCD1G3V325 749 aa19.55■□□□□ 0.72
SMAD6-203ENST00000558937 GRIPAP1Q4V328 841 aa19.55■□□□□ 0.72
SMAD6-203ENST00000558937 DNAJC5GQ8N7S2 189 aa19.55■□□□□ 0.72
SMAD6-203ENST00000558937 CEP350Q5VT06 3117 aa19.55■□□□□ 0.72
SMAD6-203ENST00000558937 TAF1P21675 1872 aa19.54■□□□□ 0.72
SMAD6-203ENST00000558937 FZD9O00144 591 aa19.54■□□□□ 0.72
SMAD6-203ENST00000558937 CCDC27Q2M243 656 aa19.54■□□□□ 0.72
SMAD6-203ENST00000558937 PHAXQ9H814 394 aaKnown RBP19.54■□□□□ 0.72
SMAD6-203ENST00000558937 ATP6V0A2Q9Y487 856 aa19.54■□□□□ 0.72
SMAD6-203ENST00000558937 IQCA1LA6NCM1 817 aa19.53■□□□□ 0.72
SMAD6-203ENST00000558937 POTEIP0CG38 1075 aa19.53■□□□□ 0.72
SMAD6-203ENST00000558937 POTEJP0CG39 1038 aa19.53■□□□□ 0.72
SMAD6-203ENST00000558937 GOLGA2Q08379 1002 aa19.53■□□□□ 0.72
SMAD6-203ENST00000558937 JDP2Q8WYK2 163 aa19.53■□□□□ 0.72
SMAD6-203ENST00000558937 DDX46Q7L014 1031 aaKnown RBP19.52■□□□□ 0.72
SMAD6-203ENST00000558937 RIC3Q7Z5B4 369 aa19.52■□□□□ 0.72
SMAD6-203ENST00000558937 WWC1Q8IX03 1113 aa19.52■□□□□ 0.72
SMAD6-203ENST00000558937 TSPYL6Q8N831 410 aa19.52■□□□□ 0.72
SMAD6-203ENST00000558937 TSR2Q969E8 191 aaKnown RBP19.52■□□□□ 0.72
SMAD6-203ENST00000558937 LRRC37AA6NMS7 1700 aa19.51■□□□□ 0.71
SMAD6-203ENST00000558937 TRIM28Q13263 835 aaKnown RBP19.51■□□□□ 0.71
SMAD6-203ENST00000558937 GRAPQ13588 217 aa19.51■□□□□ 0.71
SMAD6-203ENST00000558937 CHADLQ6NUI6 762 aa19.51■□□□□ 0.71
SMAD6-203ENST00000558937 LARGE2Q8N3Y3 721 aa19.51■□□□□ 0.71
SMAD6-203ENST00000558937 GRAPLQ8TC17 118 aaPredicted RBP19.51■□□□□ 0.71
SMAD6-203ENST00000558937 FAM89AQ96GI7 184 aa19.51■□□□□ 0.71
SMAD6-203ENST00000558937 TMX4Q9H1E5 349 aaPredicted RBP19.51■□□□□ 0.71
SMAD6-203ENST00000558937 TAF1DQ9H5J8 278 aaPredicted RBP19.51■□□□□ 0.71
SMAD6-203ENST00000558937 BBOX1O75936 387 aa19.5■□□□□ 0.71
SMAD6-203ENST00000558937 CCDC30Q5VVM6 783 aa19.5■□□□□ 0.71
SMAD6-203ENST00000558937 KLRG1Q96E93 195 aa19.5■□□□□ 0.71
SMAD6-203ENST00000558937 ADAMTSL1Q8N6G6 1762 aa19.49■□□□□ 0.71
SMAD6-203ENST00000558937 PPIP5K2O43314 1243 aa19.49■□□□□ 0.71
SMAD6-203ENST00000558937 EIF6P56537 245 aaKnown RBP19.49■□□□□ 0.71
SMAD6-203ENST00000558937 RTL5Q5HYW3 569 aaPredicted RBP19.49■□□□□ 0.71
SMAD6-203ENST00000558937 SP8Q8IXZ3 490 aa19.49■□□□□ 0.71
SMAD6-203ENST00000558937 GPC2Q8N158 579 aa19.49■□□□□ 0.71
SMAD6-203ENST00000558937 MYD88Q99836 296 aa19.49■□□□□ 0.71
SMAD6-203ENST00000558937 HACL1Q9UJ83 578 aa19.49■□□□□ 0.71
SMAD6-203ENST00000558937 COL4A1P02462 1669 aa19.49■□□□□ 0.71
SMAD6-203ENST00000558937 LTBP1Q14766 1721 aa19.48■□□□□ 0.71
SMAD6-203ENST00000558937 SF3B3Q15393 1217 aaKnown RBP19.48■□□□□ 0.71
SMAD6-203ENST00000558937 NCBP3Q53F19 620 aaKnown RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms